FC878172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_LACDB (Probable potassium transport system protein kup OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=kup PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.866e-21 Identity = 70/244 (28.69%), Postives = 122/244 (50.00%), Query Frame = 1 Query: 271 LGVVFGGLVTSPLYVYPSM-----PLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGI------RAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFH-FFWRKGKEGWLLL 966 +G+V+G + TSPLYV S+ + + D +G S++ WT+TL+ V+ IAL+A + GEGG FALY+L+ +K L++ A++G ++ DG LTPA++V SA++G+ + P +++ V ++ ++L+VLF +Q+ GT + F PIM W ++G+ +I ++ I +AL+P+Y F K G+ +L Sbjct: 19 IGIVYGDIGTSPLYVMKSVIAGNGGINTVGRDLIIGTISLILWTVTLLTTVQTVIIALRATNHGEGGIFALYALIRKK-------------------------------------AAWLVWPALIGGAAILADGTLTPAVTVTSAIEGLKGLEFGKGNVPVSNQTTVLVITIVILLVLFSIQRMGTRIIGKAFGPIMLVWFAFLGVMGLINIGGNW-WILQALNPYYAIKLLFSPYNKAGFAIL 224
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_CITK8 (Low affinity potassium transport system protein kup OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=kup PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.866e-21 Identity = 70/225 (31.11%), Postives = 104/225 (46.22%), Query Frame = 1 Query: 271 LGVVFGGLVTSPLYVYPSMPLKS----PTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFF 933 +GVV+G + TSPLY D G S++FW L + +KY + ++AD+ GEGG L SL R S L+ + ++G G+ ++TPAISV+SA++G+ P + +V LS IVL +LF++QK GT V LF+PIM W +G+ SII + P + AL+P + FF Sbjct: 17 IGVVYGDIGTSPLYTLRECLSGQFGFGVERDAVFGFLSLIFWLLIFVVSIKYLTFVMRADNAGEGGILTLMSLAGRNTSARMTST--------------------------------LVIMGLIGGSFFYGEVVITPAISVMSAIEGLEIVAPELDTWVVP-LSIIVLTLLFMIQKHGTGMVGKLFAPIMLTWFLILAGLGLRSIIAN-PDVLHALNPMWAAKFF 207
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_LACDA (Probable potassium transport system protein kup OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=kup PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.975e-20 Identity = 69/244 (28.28%), Postives = 122/244 (50.00%), Query Frame = 1 Query: 271 LGVVFGGLVTSPLYVYPSM-----PLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGI------RAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFH-FFWRKGKEGWLLL 966 +G+V+G + TSPLYV S+ + + D +G S++ WT+TL+ V+ IAL+A + GEGG FALY+L+ +K L++ A++G ++ DG LTPA++V +A++G+ + P +++ V ++ ++L+VLF +Q+ GT + F PIM W ++G+ +I ++ I +AL+P+Y F K G+ +L Sbjct: 10 IGIVYGDIGTSPLYVMKSVIAGNGGINTVGRDLIIGTISLILWTVTLLTTVQTVIIALRATNHGEGGIFALYALIRKK-------------------------------------AAWLVWPALIGGAAILADGTLTPAVTVTTAIEGLKGLEFGKGNVPVSNQTTVLVITIVILLVLFSIQRMGTRIIGKAFGPIMLVWFAFLGVMGLINIGGNW-WILQALNPYYAIKLLFSPYNKAGFAIL 215
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_HERAR (Probable potassium transport system protein kup OS=Herminiimonas arsenicoxydans GN=kup PE=3 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 7.506e-20 Identity = 71/243 (29.22%), Postives = 119/243 (48.97%), Query Frame = 1 Query: 229 KKGRWENLVLAYKTLGVVFGGLVTSPLYVYPSMPLKSP----TEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKG 945 KK L LA +G+V+G + TSPLY + K T ++ LG+ S++ W L +I +KY ++ L+A+++GEGG AL +L + ++ NS ++ L+ + + G + GD ++TPAISVLSA++G+ S V ++ +L+ L+ LQ GT+ + F P+M W + ++G+ +II P I AL+P + HF G Sbjct: 6 KKSSLAALTLA--AVGIVYGDIGTSPLYTMKEVFSKEHGLDLTPENLLGVVSLIVWGLIIIVSLKYVTLVLRANNRGEGGIMALMAL----------ALSSVTKNSRWYFP--------------------LMVMGLFGATLFYGDSVITPAISVLSAVEGLGVA-TSAFDPYVVPVTVAILVGLYSLQARGTAGIGKWFGPVMLIWFITLAVMGVVNII-DAPYILHALNPWHALHFLSGNG 214
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP3_BRASB (Probable potassium transport system protein kup 3 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=kup3 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.280e-19 Identity = 66/242 (27.27%), Postives = 111/242 (45.87%), Query Frame = 1 Query: 256 LAYKTLGVVFGGLVTSPLYVYPSMPLKSPTEDD-----YLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 L ++GVV+G + TSPLY + + + +G+ S++ W L ++ +KY I L+AD+ GEGGT AL +L R + G I++ + ++ + GD ++TPA+SVLSA++G + + +V L+ I+L LF +Q GT++V+ F PIM W + I+ H P + A++P F G G++ L Sbjct: 30 LTLGSIGVVYGDIGTSPLYALREAVTAASSSGEAAPHAVMGVISLILWALIVVVTLKYVVILLRADNHGEGGTLALMALAQRGVTRG---------------------------------ASIIVLLGIISGALFYGDAVITPALSVLSAIEGTKLVTAAFDPYVVP-LTVIILAALFAVQARGTAKVAAFFGPIMLIWFLVIGIAAFPPILRH-PEVLWAINPVNAVSFMLHHGIVGFITL 236
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_WIGBR (Low affinity potassium transport system protein kup OS=Wigglesworthia glossinidia brevipalpis GN=kup PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.263e-15 Identity = 61/232 (26.29%), Postives = 109/232 (46.98%), Query Frame = 1 Query: 250 LVLAYKTLGVVFGGLVTSPLYVYPSMPLKS-PTEDDYL---GIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFF 933 L + T+ V+ G + SP+Y+ + + + D L GI SI+FWTL I +KY + + ++ GEGG L S+ +AK ++S S F +++ + ++ MC+ GD I+ P+IS++S ++ I + S K + +S + LF +QK + + +FS ++ W L+G+ I+ P I A++P Y +FF Sbjct: 13 LCTIFSTINVLHGLIAISPIYIIKESFVNNLGFKIDKLAIFGILSIIFWTLFFIIFLKYLILIVSINNSGEGGILTLMSI----------TAKKINSKSTF----------------------VIVILGLISMCLFFGDIIIIPSISIISVIEEISIYYLSFEK-FIFIISIAIFTFLFFIQKKIKNEFNNIFSFLISIWFILVGLIGLKG-IYINPEILLAINPKYLINFF 210 The following BLAST results are available for this feature:
BLAST of FC878172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 336
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878172 ID=FC878172; Name=FC878172; organism=Citrus clementina; type=EST; length=966bpback to top |