FC878172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_XANCP (Probable potassium transport system protein kup OS=Xanthomonas campestris pv. campestris GN=kup PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.155e-28 Identity = 78/245 (31.84%), Postives = 124/245 (50.61%), Query Frame = 1 Query: 247 NLVLAYKTLGVVFGGLVTSPLYVY-----PSMPLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 ++ L +GVVFG + TSPLY P L S D LG+ S+ FW L + +KY +I ++AD++GEGG AL +L R + G SA ++ + + G + GDG++TPAISV+ A++G+ PS+ +V ++ +VL+V+F++Q+FGT +V +F PI W S +GI++I+ P + KA +P + FF G G +L Sbjct: 19 HMALVIGAIGVVFGDIGTSPLYTLKEAFSPHYGLTSD-HDTVLGVLSLAFWALMITVTLKYVTIIMRADNEGEGGIMALMALTQRTLKQGSRSA------------------------------YVVGILGIFGASLFFGDGVITPAISVMGAVEGLEIAAPSLHPFIV-PITVVVLLVVFMVQRFGTEKVGKVFGPITCLWFLSLGAIGIWNIV-DAPEVLKAFNPWWAIRFFMEHGWHGVFIL 230
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_XANC8 (Probable potassium transport system protein kup OS=Xanthomonas campestris pv. campestris (strain 8004) GN=kup PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.155e-28 Identity = 78/245 (31.84%), Postives = 124/245 (50.61%), Query Frame = 1 Query: 247 NLVLAYKTLGVVFGGLVTSPLYVY-----PSMPLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 ++ L +GVVFG + TSPLY P L S D LG+ S+ FW L + +KY +I ++AD++GEGG AL +L R + G SA ++ + + G + GDG++TPAISV+ A++G+ PS+ +V ++ +VL+V+F++Q+FGT +V +F PI W S +GI++I+ P + KA +P + FF G G +L Sbjct: 19 HMALVIGAIGVVFGDIGTSPLYTLKEAFSPHYGLTSD-HDTVLGVLSLAFWALMITVTLKYVTIIMRADNEGEGGIMALMALTQRTLKQGSRSA------------------------------YVVGILGIFGASLFFGDGVITPAISVMGAVEGLEIAAPSLHPFIV-PITVVVLLVVFMVQRFGTEKVGKVFGPITCLWFLSLGAIGIWNIV-DAPEVLKAFNPWWAIRFFMEHGWHGVFIL 230
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_NITMU (Probable potassium transport system protein kup OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=kup PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.155e-28 Identity = 85/240 (35.42%), Postives = 124/240 (51.67%), Query Frame = 1 Query: 253 VLAYKTLGVVFGGLVTSPLYVYPSM--PLK--SPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWL 960 +L LGVV+G + TSPLYV ++ P+ + TE + +GI S++FWT+ ++ +KY ++ L+AD+ GEGG AL SL S ++ RL IL I G + GDG++TPAISVLSA++G+ P + + V ++ +VLI LF+LQ+ GT + LF P+M W S LVG+ +I P I A +P Y F F GWL Sbjct: 19 LLCLAALGVVYGDIGTSPLYVMKTVFDPIHGLAVTESNVIGIISLIFWTIMIVVSLKYVTLILRADNHGEGGIMALLSLAS--------------------SSVTDRPRL----------HNILFLIGAFGAALFFGDGVITPAISVLSAVEGLEVATP-LLQPYVLPITVVVLIALFMLQQRGTGGIGALFGPVMVIWFVSLGLVGLINIA-GAPQIVAAFNPMYAFAFCI---SNGWL 223
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_BURA4 (Probable potassium transport system protein kup OS=Burkholderia ambifaria (strain MC40-6) GN=kup PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.155e-28 Identity = 80/232 (34.48%), Postives = 119/232 (51.29%), Query Frame = 1 Query: 256 LAYKTLGVVFGGLVTSPLYVYPS-------MPLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHF 930 LA +GVVFG + TSPLY +PL TE LG+ S++FW + L+ +KY ++AD+ GEGG AL +L R +D +K+R+ L+ + + G CM GD ++TPAISV+SA++G+ P +S LV ++ ++LI LF +Q+ GT+ V LF PIM W +G+Y I PGI A++P+Y F Sbjct: 24 LAIAAIGVVFGDIGTSPLYALKEAFSPAHGIPL---TESSILGVISLLFWAIILVVGIKYLLFVMRADNNGEGGVLALMALSLRPLD--------------------SKTRVA----------GALMALGIFGACMFYGDAVITPAISVMSAVEGLEIATPHLS-HLVLPITIVILIALFWIQRHGTALVGKLFGPIMVVWFVVIAALGVYHIA-RVPGIIAAINPYYAASF 220
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_ACIAC (Probable potassium transport system protein kup OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=kup PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.155e-28 Identity = 85/241 (35.27%), Postives = 124/241 (51.45%), Query Frame = 1 Query: 256 LAYKTLGVVFGGLVTSPLY----VYPSMPLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 L +GVV+G + TS LY V+ S + ++ Y G+ SI+FWTLT I +KY + L+AD+ GEGG A+ +L S + ++K RL R LL I + G + GDG++TPAISVLSA++G+ P K+++ L+ IVL LF +QK GTS + F P+ W S +G+ I+ H P I ALSPH+ F WR +++L Sbjct: 11 LTLGAIGVVYGDIGTSVLYAVKEVFGSGHVAFTPQNVY-GVLSILFWTLTTIVSLKYVVLVLRADNNGEGGLIAMLALAS--------------------QAVKDKPRL----------RSALLGIGVFGTSLFYGDGVITPAISVLSAVEGLEVVSPHFGKAVI-PLTLIVLFCLFAVQKRGTSGIGRYFGPVTLVWFTSIAALGVPHIVGH-PEILGALSPHHALGFIWRSPGTSFIIL 218
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP3_RALEH (Probable potassium transport system protein kup 3 OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=kup3 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.155e-28 Identity = 76/241 (31.54%), Postives = 124/241 (51.45%), Query Frame = 1 Query: 256 LAYKTLGVVFGGLVTSPLYVYPSMPLKSP----TEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 L +GVVFG + TSPLY K + D LG+ SI+FW + ++ +KY ++AD+ GEGG AL +L+ R + +SR K IL+ + + G CM GD ++TPAISVLSA++G+ P +S+ ++ ++ ++L LFL+Q+ GT+ V LF PIM W + +GI +++ P I K+++P+Y F + +++L Sbjct: 19 LVLGAVGVVFGDIGTSPLYALKECFSKEHGIAFSPDAVLGVISILFWAMIIVVSIKYVVFVMRADNDGEGGVLALMALVLRTV--------------------AQRSRKAK----------ILMMLGIFGACMFYGDAVITPAISVLSAVEGLEIAAPQLSQFVI-PITLVILAALFLIQRHGTAAVGKLFGPIMTTWFVALGALGILNLV-QAPEILKSINPYYAISFLVEHALQAFIVL 227
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP3_LEGPH (Probable potassium transport system protein kup 3 OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=kup3 PE=3 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 1.155e-28 Identity = 76/241 (31.54%), Postives = 121/241 (50.21%), Query Frame = 1 Query: 256 LAYKTLGVVFGGLVTSPLYVYPSMPLKS----PTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 L+ LG+V+G + TSPLY + ++ L + P + +G S++ WTL +I VKY AL+ D+ GEGG AL SLLS K+ R ++ + ++G ++ GDG +TPAISVLSA++G+ PS+ K V ++ +LI LF +Q GT+ + F P+M W + ++G +I H P + A++P Y F + G G+ +L Sbjct: 20 LSLSALGIVYGDIGTSPLYTFKTVILLAGGGTPAVNTIMGSVSLIIWTLIIIASVKYIHFALRIDNDGEGGILALMSLLSLKLK----------------------------------QRPFIIAVGLMGAALIYGDGTITPAISVLSAVEGLEILSPSL-KYYVLPIAITILITLFAIQSKGTATIGKAFGPVMAFWFLTIGILGARGVIQH-PSVLAAINPIYGLSFLFSNGATGFFIL 224
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP1_LEGPL (Probable potassium transport system protein kup 1 OS=Legionella pneumophila (strain Lens) GN=kup1 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.509e-28 Identity = 79/238 (33.19%), Postives = 122/238 (51.26%), Query Frame = 1 Query: 256 LAYKTLGVVFGGLVTSPLYVYPSMPLKSPTED-DYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 LA LGVVFG + TSPLY P + LG+ S++FW+L ++ KY I +AD+ GEGG AL +L+ K S + + +A+ G +L+GDG+LTPAISV+SA++G+ V +++++LI+LF LQ GT R+ +LF P++ W + ++GI I H P + KA++P+Y F +G +G+LLL Sbjct: 10 LALGALGVVFGDIGTSPLYALKVTLSGIPINQFNILGVLSLIFWSLIIVVSFKYLMIIFRADNNGEGGILALLALMKHK---------------------------------STKYQPLFYIVAIFGAGLLLGDGMLTPAISVVSAVEGL-GTLSDKLYPYVLPIASLILILLFSLQATGTGRIGYLFGPLILVWFITIAILGILQIAEH-PVVLKAINPYYAIAFLVDEGLQGYLLL 212
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_BURCM (Probable potassium transport system protein kup OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=kup PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.971e-28 Identity = 80/232 (34.48%), Postives = 118/232 (50.86%), Query Frame = 1 Query: 256 LAYKTLGVVFGGLVTSPLYVYPS-------MPLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHF 930 LA +GVVFG + TSPLY +PL TE LG+ S++FW + L+ +KY ++AD+ GEGG AL +L R +D K+R+ L+ + + G CM GD ++TPAISV+SA++G+ P +S LV ++ ++LI LF +Q+ GT+ V LF PIM W +G+Y I PGI A++P+Y F Sbjct: 24 LAIAAIGVVFGDIGTSPLYALKEAFSPAHGIPL---TESSILGVISLLFWAIILVVGIKYLLFVMRADNNGEGGVLALMALSLRPLD--------------------PKTRVA----------GALMALGIFGACMFYGDAVITPAISVMSAVEGLEIATPHLS-HLVLPITIVILIALFWIQRHGTALVGKLFGPIMVVWFIVIAALGVYHIA-RVPGIIAAINPYYAASF 220
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_CHLTE (Probable potassium transport system protein kup OS=Chlorobium tepidum GN=kup PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.574e-28 Identity = 86/244 (35.25%), Postives = 125/244 (51.23%), Query Frame = 1 Query: 256 LAYKTLGVVFGGLVTSPLYVYP-------SMPLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 ++ LGVVFG + TSPLY S+P+ +P + LG+ S++ W L LI +KY + +KAD++GEGG AL +L I +NKS R IL+ + + G +L GDG++TP+ISVLSA++GI+ PS LV ++ +L LFL Q GT++V F PI+ W S L G+ I+ YP I KA+ P Y F +G+L+L Sbjct: 1 MSLAALGVVFGDIGTSPLYAIRECFHGEFSIPVNTP---NVLGVLSLLIWALLLIVTLKYLTFIMKADNEGEGGILALTAL-------------------IISHSKKNKSE-----------RWILVSLGLFGAALLYGDGMITPSISVLSAVEGIQIIAPSFG-PLVIPVTIAILAGLFLFQHHGTAKVGSFFGPIILLWFTSIGLCGLVEIV-KYPAILKAVFPWYGLEFLVNNHAKGFLVL 209 The following BLAST results are available for this feature:
BLAST of FC878172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 336
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878172 ID=FC878172; Name=FC878172; organism=Citrus clementina; type=EST; length=966bpback to top |