FC878174
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: PEL1_ARATH (Probable pectate lyase 1 OS=Arabidopsis thaliana GN=At1g04680 PE=2 SV=2) HSP 1 Score: 213.001 bits (541), Expect = 1.874e-54 Identity = 103/196 (52.55%), Postives = 127/196 (64.80%), Query Frame = 1 Query: 292 CEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAGIRLQFVQNVXXXXXXXXXXSPASGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSN 879 C NPID CWRC NW ++R+ LA C + Y VTD D+N NP+ GTLRHAVIQ PLWI+F +DM I+L+QEL+V KTIDGRGANVHIANG I +QFV NV P M+R S H G R +DGDA+S+FGSS++W+DH +LS DGL+DA+ GSTAITISN HL++ Sbjct: 77 CGTGNPIDDCWRCDPNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDNPVNPRPGTLRHAVIQDRPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIVHGLHIHDCKPTGNAMVRSSETHFGWRTMADGDAISIFGSSHVWIDHNSLSHCADGLVDAVMGSTAITISNNHLTH 272
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: PEL20_ARATH (Probable pectate lyase 20 OS=Arabidopsis thaliana GN=At5g48900 PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 4.617e-53 Identity = 109/239 (45.61%), Postives = 146/239 (61.09%), Query Frame = 1 Query: 166 QTTEQYYDPDPVAVASNLNMKVQDLSKQTAARR-GLLNAESGQCEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAGIRLQFVQNVXXXXXXXXXXSPASGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSN 879 +T ++ +P VA+ ++M +++ TA RR G + +G NPID CWRC W R+ LA CA+ Y V+D +D+N NPK GTLRHAVIQ+EPLWI+F +DM I L++EL++ KTIDGRG NVHIANGA I +QFV N+ P M+R S H G R +DGD +S+FGSS+IW+DH +LS DGLIDA+ STAITISN + ++ Sbjct: 30 ETWHEHAVENPEEVAAMVDMSIRN---STARRRLGYFSCSTG-----NPIDDCWRCDRRWQSRRKHLANCAIGFGRNAIGGRDGRYYVVSDPNDDNPVNPKPGTLRHAVIQEEPLWIVFKRDMVITLKEELIMNSFKTIDGRGVNVHIANGACITIQFVTNIIIHGIHIHDCRPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSNCADGLIDAVMASTAITISNNYFTH 260
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: PEL18_ARATH (Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2) HSP 1 Score: 206.838 bits (525), Expect = 1.343e-52 Identity = 105/230 (45.65%), Postives = 140/230 (60.87%), Query Frame = 1 Query: 190 PDPVAVASNLNMKVQDLSKQTAARRGLLNAESGQCEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAGIRLQFVQNVXXXXXXXXXXSPASGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSN 879 PDP +V ++ + ++ A RR L C NPID CWRC +W + RQ LA CA+ IY VTDS ++N +PK GTLRHAV+Q EPLWIIF +DM I+L++EL++ KTIDGRGA+VHI+ G I +Q+V N+ M+R S H G R SDGD VS+FG S++W+DH + S +DGLIDAI GSTAIT+SN H+++ Sbjct: 28 PDPESVVEEVH---KSINASVAGRRKLGYLS---CTTGNPIDDCWRCDPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGGNAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNHMTH 251
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: PEL12_ARATH (Probable pectate lyase 12 OS=Arabidopsis thaliana GN=At3g53190 PE=2 SV=2) HSP 1 Score: 205.682 bits (522), Expect = 2.992e-52 Identity = 106/230 (46.09%), Postives = 133/230 (57.83%), Query Frame = 1 Query: 190 PDPVAVASNLNMKVQDLSKQTAARRGLLNAESGQCEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAGIRLQFVQNVXXXXXXXXXXSPASGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSN 879 PDP VA + KV + A A S C NPID CW+C NW +RQ LA C + Y VTDSSD++ NPK GTLR+ VIQ+EPLWI+F +M IKL+QEL+ KT+DGRGANVHI G I LQ+V N+ + +R S H G R SDGD +S+FGS +IW+DH +LS+ +DGLIDA+ GST ITISN S+ Sbjct: 36 PDPELVAYQVQWKVNASITRRQALDTTDQAGSTPCITGNPIDDCWKCDPNWPNNRQGLADCGIGFGQYALGGKGGQFYFVTDSSDDDAVNPKPGTLRYGVIQEEPLWIVFPSNMMIKLKQELIFNSYKTLDGRGANVHIVGGGCITLQYVSNIIIHNIHIHHCYQSGNTNVRSSPTHYGFRTKSDGDGISIFGSKDIWIDHCSLSRCKDGLIDAVMGSTGITISNNFFSH 265
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: PEL9_ARATH (Probable pectate lyase 9 OS=Arabidopsis thaliana GN=At3g24230 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 1.137e-51 Identity = 111/234 (47.44%), Postives = 145/234 (61.97%), Query Frame = 1 Query: 187 DPDPVA--VASNLNMKVQDLSKQTAARR-GLLNAESGQCEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAGIRLQFVQNVXXXXXXXXXXSPASGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSN 879 DPD VA V++ ++M Q++ TA R+ G + +G N ID CWRC NW ++R+ LA C + Y VTD SD+++ NPK GTLRHAVIQ EPLWIIF +DM IKL+QEL++ KTID RGANVHIANGA I +Q + NV +R S G RG +DGDA+++FGSS+IW+DH +LS DGL+D + GSTAITISN H ++ Sbjct: 70 DPDKVAHEVSNLIHMSEQNI---TARRKLGFFSCGNG-----NLIDDCWRCDRNWNKNRKHLADCGMGFGSKAFGGRNGSYYVVTDHSDDDVVNPKPGTLRHAVIQVEPLWIIFKRDMVIKLKQELIMNSFKTIDARGANVHIANGACITIQNITNVIVHGLHIHDCKRTGNVTVRSSPSQAGFRGTADGDAINIFGSSHIWIDHNSLSNCTDGLVDVVNGSTAITISNNHFTH 295
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: PEL8_ARATH (Probable pectate lyase 8 OS=Arabidopsis thaliana GN=At3g07010 PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.485e-51 Identity = 109/248 (43.95%), Postives = 140/248 (56.45%), Query Frame = 1 Query: 121 AEADEVWRRRAEEAMQTTEQYYDPDPVAVASNLNMKVQDLSKQTAARRGLLNAESGQCEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAGIRLQFVQNVXXXXXXXXXXSPASGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISN 864 + ++E W A E +PD VA + D+S + + R L S C NPID CWRC W R+ LA C++ Y VTD D++ NP GTLRHAVIQ EPLWIIF +DM I L+QEL++ KTIDGRG NVHIANGA + +Q+V N+ P M+R S H G R +DGDA+S+FGSS+IW+DH +LS DGL+DA+ STAIT+SN Sbjct: 25 SRSNETWHEHAVE---------NPDEVAA-------MVDMSIRNSTERRRLGYFS--CATGNPIDDCWRCDRKWQLRRKRLADCSIGFGRNAIGGRDGRFYVVTDPGDDDPVNPIPGTLRHAVIQDEPLWIIFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACLTIQYVTNIIVHGIHVHDCKPTGNAMVRSSPSHYGFRSMADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMSSTAITVSN 254
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: PEL11_ARATH (Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.940e-51 Identity = 99/209 (47.37%), Postives = 133/209 (63.64%), Query Frame = 1 Query: 253 AARRGLLNAESGQCEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAGIRLQFVQNVXXXXXXXXXXSPASGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSN 879 A+RR L C NPID CWRC NW +RQ LA CA+ IY VTD ++++ NP+ GTLR+AV Q+EPLWIIF +DM I+L++EL++ KTIDGRG++VHI +G +++ + N+ P SGGMI+D H G SDGDAV++FG ++W+DH +LS DGLIDAI GSTAITISN H+++ Sbjct: 47 ASRRSLAYLS---CRTGNPIDDCWRCDPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQEEPLWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCKPGSGGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITISNNHMTH 252
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: PEL10_ARATH (Probable pectate lyase 10 OS=Arabidopsis thaliana GN=At3g24670 PE=2 SV=2) HSP 1 Score: 201.445 bits (511), Expect = 5.643e-51 Identity = 106/229 (46.29%), Postives = 141/229 (61.57%), Query Frame = 1 Query: 193 DPVAVASNLNMKVQDLSKQTAARRGLLNAESGQCEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAGIRLQFVQNVXXXXXXXXXXSPASGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSN 879 +P VA+ ++MK+++ +++ R G + +G NPID CWRC NW R+ LA CA+ Y VTD SD++ NP+ GTLRHAVIQ PLWI+F +DM I L QEL++ KTIDGRG NV IA GA I +Q+V N+ M+R S H G R +DGDA+S+FGSS+IW+DH +LS DGLIDAI GSTAITISN ++++ Sbjct: 62 NPEEVAAMVDMKIKNSTERR--RLGFFSCATG-----NPIDDCWRCDRNWHLRRKRLANCAIGFGRNAIGGRDGRYYVVTDPSDHDAVNPRPGTLRHAVIQDRPLWIVFKRDMVITLTQELIMNSFKTIDGRGVNVAIAGGACITIQYVTNIIIHGINVHDCRRTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISNNYMTH 283
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: PEL14_ARATH (Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.145e-50 Identity = 106/229 (46.29%), Postives = 138/229 (60.26%), Query Frame = 1 Query: 193 DPVAVASNLNMKVQDLSKQTAARRGLLNAESGQCEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAGIRLQFVQNVXXXXXXXXXXSPASGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSN 879 DP +A+ ++M +++ + RR L S C NPID CWRC + W R+ LA CA+ Y VTD SD++ PK GTLR+AVIQ EPLWI+F +DM I L QEL++ KTIDGRG NVHIA GA + +Q+V N+ M+R S H G R +DGD +S+FGSS+IW+DH +LS DGLIDAI GSTAITISN +L++ Sbjct: 39 DPEEIAAMVDMSIRN----STYRRKLGFFSS--CSTGNPIDDCWRCDKKWHRRRKRLADCAIGFGRNAVGGRDGRYYIVTDPSDHDPVTPKPGTLRYAVIQDEPLWIVFKRDMVITLSQELIMNSFKTIDGRGVNVHIAGGACLTVQYVTNIIIHGINIHDCKRTGNAMVRSSESHYGWRTMADGDGISIFGSSHIWIDHNSLSSCADGLIDAIMGSTAITISNNYLTH 261
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: PEL22_ARATH (Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.658e-50 Identity = 101/229 (44.10%), Postives = 142/229 (62.01%), Query Frame = 1 Query: 193 DPVAVASNLNMKVQDLSKQTAARRGLLNAESGQCEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAGIRLQFVQNVXXXXXXXXXXSPASGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSN 879 DP V ++ K+ + + +RR L C + NPID CWRC ++W ++R+ LA C + IY VTD +++ NP+ GTLR+AVIQ EPLWIIF +DM I+L++EL++ KT+DGRGA+VHI+ G I +Q+V N+ +RDS +H G R SDGD VS+FG S++W+DH +LS DGLIDAI+GSTAITISN +L++ Sbjct: 52 DPELVVEEVHRKINE----SISRRKL---GFFSCGSGNPIDDCWRCDKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQDEPLWIIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDCKQGGNTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITISNNYLTH 273 The following BLAST results are available for this feature:
BLAST of FC878174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878174 ID=FC878174; Name=FC878174; organism=Citrus clementina; type=EST; length=899bpback to top |