FC878174
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: MPA11_AMBAR (Pollen allergen Amb a 1.1 OS=Ambrosia artemisiifolia PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 4.054e-41 Identity = 90/189 (47.62%), Postives = 114/189 (60.32%), Query Frame = 1 Query: 298 ATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAGIRLQFVQNVXXXXXXXXXXSPASGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISN 864 A N ID CWR K +WAE+R+ALA CA IY VT D+++ NPK GTLR Q PLWIIF +DM I+L +E+VV +KTIDGRGA V I N AG L V+NV GG+I+ + R SDGDA+S+ GSS IW+DH +LSK+ DGL+DA G+T +T+SN Sbjct: 46 AYNIIDGCWRGKADWAENRKALADCAQGFGKGTVGGKDGDIYTVTSELDDDVANPKEGTLRFGAAQNRPLWIIFERDMVIRLDKEMVVNSDKTIDGRGAKVEIIN-AGFTLNGVKNVIIHNINMHDVKVNPGGLIKSNDGPAAPRAGSDGDAISISGSSQIWIDHCSLSKSVDGLVDAKLGTTRLTVSN 233
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: MPA14_AMBAR (Pollen allergen Amb a 1.4 OS=Ambrosia artemisiifolia PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 9.031e-41 Identity = 90/192 (46.88%), Postives = 111/192 (57.81%), Query Frame = 1 Query: 292 CEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAGIRLQFVQNVXXXXXXXXXXSPASGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNC 867 C N ID CWR K +WAE+R+ALA CA IY VT D+++ NPK GTLR Q PLWIIFA+DM I+L +EL + +KTIDGRGA V I N AG + V+N+ GG+I+ R SDGDA+ + G S IW+DH +LSKA DGLIDA GST T+SNC Sbjct: 45 CGTYNIIDGCWRGKADWAENRKALADCAQGFAKGTIGGKDGDIYTVTSELDDDVANPKEGTLRFGAAQNRPLWIIFARDMVIRLDRELAINNDKTIDGRGAKVEIIN-AGFAIYNVKNIIIHNIIMHDIVVNPGGLIKSHDGPPVPRKGSDGDAIGISGGSQIWIDHCSLSKAVDGLIDAKHGSTHFTVSNC 235
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: PEL4_ARATH (Probable pectate lyase 4 OS=Arabidopsis thaliana GN=At1g30350 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 8.747e-36 Identity = 84/187 (44.92%), Postives = 106/187 (56.68%), Query Frame = 1 Query: 304 NPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAGIRLQFVQNVXXXXXXXXXXSPASGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISN 864 NPID CWR WA +RQALA CA+ IY VT+ SDN P GTLR+AV Q +PLWI FA+DM I L+ +L++ KTIDGRGA V IANG +R++ V++V GM DGD + VF S+++W+DH LS+ DGLID I STA+TISN Sbjct: 36 NPIDACWRRNPKWATNRQALAHCAVGYGKAAIGGKNGPIYVVTNPSDNPTR-PSPGTLRYAVSQPKPLWITFARDMVIVLKSQLMINSYKTIDGRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNGM--------------DGDGIRVFQSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISN 207
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: MPAJ1_JUNVI (Major pollen allergen Jun v 1 OS=Juniperus virginiana PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.675e-34 Identity = 82/199 (41.21%), Postives = 115/199 (57.79%), Query Frame = 1 Query: 292 CEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAG-IRLQFVQNVXXXXXXXXXXSPASGG--MIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSN 879 C + NPID CWR NW ++R LA CA+ Y VT S+D+N NP GTLR+ +++ LWIIF+++MNIKL+ L V G+KTIDGRGA+VH+ NG + ++ V +V + + G ++ +S+ V DGDA+++ +N W+DH +LS DGLID GST ITISN H N Sbjct: 19 CCSDNPIDSCWRGDSNWGQNRMKLADCAVGFGSSTMGGKGGDFYTVT-SADDNPVNPTPGTLRYGATREKTLWIIFSQNMNIKLKMPLYVAGHKTIDGRGADVHLGNGGPCLFMRKVSHVILHGLHIHGCNTSVLGDVLVSESIGVVPVHA-QDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFN 215
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: MPAC1_CHAOB (Major pollen allergen Cha o 1 OS=Chamaecyparis obtusa PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.800e-34 Identity = 79/198 (39.90%), Postives = 111/198 (56.06%), Query Frame = 1 Query: 292 CEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAG-IRLQFVQNVXXXXXXXXXXSPA-SGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSN 879 C + NPID CWR NW ++R LA CA+ Y VT SSD++ NP GTLR+ ++ LWIIF+K++NIKL L + GNKTIDGRGA VHI NG + ++ V +V + + SG ++ V DGDA+++ +++W+DH +LS + DGL+D ST +TISN H N Sbjct: 19 CFSDNPIDSCWRGDANWDQNRMKLADCAVGFGSSAMGGKGGAFYTVT-SSDDDPVNPAPGTLRYGATRERSLWIIFSKNLNIKLNMPLYIAGNKTIDGRGAEVHIGNGGPCLFMRTVSHVILHGLNIHGCNTSVSGNVLISEASGVVPVHAQDGDAITMRNVTDVWIDHNSLSDSSDGLVDVTLASTGVTISNNHFFN 215
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: MPAJ1_JUNAS (Major pollen allergen Jun a 1 OS=Juniperus ashei PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 6.269e-34 Identity = 82/199 (41.21%), Postives = 115/199 (57.79%), Query Frame = 1 Query: 292 CEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAG-IRLQFVQNVXXXXXXXXXXSPASGG--MIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSN 879 C + NPID CWR NW ++R LA CA+ Y VT S+D+N NP GTLR+ +++ LWIIF+++MNIKL+ L V G+KTIDGRGA+VH+ NG + ++ V +V + + G ++ +S+ V DGDA+++ +N W+DH +LS DGLID GST ITISN H N Sbjct: 19 CYSDNPIDSCWRGDSNWDQNRMKLADCAVGFGSSTMGGKGGDFYTVT-STDDNPVNPTPGTLRYGATREKALWIIFSQNMNIKLKMPLYVAGHKTIDGRGADVHLGNGGPCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIG-VEPVHAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFN 215
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: SBP_CRYJA (Sugi basic protein OS=Cryptomeria japonica PE=1 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 1.069e-33 Identity = 78/195 (40.00%), Postives = 111/195 (56.92%), Query Frame = 1 Query: 286 GQCEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAG-IRLQFVQNVXXXXXXXXXXSPA-SGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISN 864 G C + NPID CWR NWA++R LA CA+ +Y VT+S D+ + NP GTLR+ + PLWIIF+ +MNIKL+ + + G KT DGRGA V+I NG + ++ V NV S + G ++ + V P DGDA+++ ++NIW+DH + S + DGL+D ST +TISN Sbjct: 17 GSCFSDNPIDSCWRGDSNWAQNRMKLADCAVGFGSSTMGGKGGDLYTVTNSDDDPV-NPAPGTLRYGATRDRPLWIIFSGNMNIKLKMPMYIAGYKTFDGRGAQVYIGNGGPCVFIKRVSNVIIHGLHLYGCSTSVLGNVLINESFGVEPVHPQDGDALTLRTATNIWIDHNSFSNSSDGLVDVTLSSTGVTISN 210
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: MPAC1_CUPAR (Major pollen allergen Cup a 1 OS=Cupressus arizonica PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.017e-32 Identity = 81/195 (41.54%), Postives = 109/195 (55.90%), Query Frame = 1 Query: 304 NPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAG-IRLQFVQNVXXXXXXXXXXSPASGG--MIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSN 879 NPID CWR NW ++R LA C + IY VT S DN + NP GTLR+ +++ LWIIF+++MNIKLQ L V G KTIDGRGA VH+ NG + ++ +V + + G ++ +S+ V DGDA+++ +N W+DH +LS DGLID GST ITISN H N Sbjct: 2 NPIDSCWRGDSNWDQNRMKLADCVVGFGSSTMGGKGGEIYTVTSSEDNPV-NPTPGTLRYGATREKALWIIFSQNMNIKLQMPLYVAGYKTIDGRGAVVHLGNGGPCLFMRKASHVILHGLHIHGCNTSVLGDVLVSESIG-VEPVHAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFN 194 The following BLAST results are available for this feature:
BLAST of FC878174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878174 ID=FC878174; Name=FC878174; organism=Citrus clementina; type=EST; length=899bpback to top |