FC878179

Overview
NameFC878179
Unique NameFC878179
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length944
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB_COPC7 (Tubulin beta chain OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_04743 PE=3 SV=1)

HSP 1 Score: 555.444 bits (1430), Expect = 1.650e-157
Identity = 267/314 (85.03%), Postives = 285/314 (90.76%), Query Frame = 1 
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE CDCLQGFQ                   KIREEYPDR+M TYSVVPSPKVSDTVVEPYNATLSVHQLVEN+DET+CIDNEALYDICFRTLKLSTPTYGDLNHLVS+ MSG+TTCLRFPGQLN+DLRKLAVNMVPFPRLHFFM GFAPLT+RGS QYRA+TVPELTQQMFDAKNMMAA DPRHGRYLTVAA+FRG++SMKEV+EQM N+QNKNS+YFVEWIPNNV TA CDIPPRGLKMA TF+GNSTAIQELFKR+S+QFTAMF+RKAFLHWYT
Sbjct:   86 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEYPDRMMCTYSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICFRTLKLSTPTYGDLNHLVSIVMSGITTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMTGFAPLTARGSAQYRAVTVPELTQQMFDAKNMMAASDPRHGRYLTVAAVFRGKVSMKEVEEQMQNVQNKNSAYFVEWIPNNVLTAQCDIPPRGLKMAVTFLGNSTAIQELFKRVSDQFTAMFKRKAFLHWYT 399
[Close]
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB_NAEGR (Tubulin beta chain OS=Naegleria gruberi PE=2 SV=1)

HSP 1 Score: 552.747 bits (1423), Expect = 1.070e-156
Identity = 265/314 (84.39%), Postives = 284/314 (90.45%), Query Frame = 1 
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVVRKEAESCDCLQGFQ                   KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE  CIDNEALYDICFRTLKL+TPT+GDLNHLVS+ MSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAA DPRHGRYLT +A+FRGRMS KEVDEQMLN+QNKNSSYFVEWIPNN+K++VCDIPPRGLKMAATFIGNSTAIQE+FKR+SEQFTAMFRRKAFLHWYT
Sbjct:   86 RPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQIAHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMCIDNEALYDICFRTLKLTTPTFGDLNHLVSIVMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFLIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAASDPRHGRYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPRGLKMAATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYT 399
[Close]
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB_STYLE (Tubulin beta chain OS=Stylonychia lemnae GN=TUBB1 PE=3 SV=1)

HSP 1 Score: 548.895 bits (1413), Expect = 1.545e-155
Identity = 262/314 (83.44%), Postives = 280/314 (89.17%), Query Frame = 1 
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE CDCLQGFQ                   K+REEYPDRIM T+SVVPSPKVSDTVVEPYNATLSVHQLVEN DE  CIDNEALYDICFRTLKL+TPTYGDLNHLVS  +SGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQMFDAKNMM A DPRHGRYLT +A+FRGRMS KEVDEQMLN+QNKNSSYFVEWIPNN+K++VCDIPP+GLKMA TF+GNSTAIQE+FKR+ EQFTAMFRRKAFLHWYT
Sbjct:   86 RPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMATFSVVPSPKVSDTVVEPYNATLSVHQLVENADEVMCIDNEALYDICFRTLKLTTPTYGDLNHLVSAGISGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMTGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCASDPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMAVTFLGNSTAIQEMFKRVGEQFTAMFRRKAFLHWYT 399
[Close]
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB6_CHICK (Tubulin beta-6 chain OS=Gallus gallus PE=1 SV=1)

HSP 1 Score: 547.74 bits (1410), Expect = 3.441e-155
Identity = 262/314 (83.44%), Postives = 282/314 (89.81%), Query Frame = 1 
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNF+ G SGAGNNWAKGHYTEGAEL+++V+DVVR E ESCDCLQGFQ                   KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNA LS+HQL+ENTDET+CIDNEALYDICFRTLKL+ PTYGDLNHLVSLTMSGVTT LRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRAL+VPELTQQMFDA+NMMAACDPR GRYLTVA IFRGRMS +EVDEQ+L++Q KNSSYFVEWIPNNVK AVCDIPPRGLKMAATFIGN+TAIQELF R+SEQF+AMFRRKAFLHWYT
Sbjct:   86 RPDNFIHGNSGAGNNWAKGHYTEGAELIENVMDVVRNECESCDCLQGFQLIHSLGGGTGSGMGTLLINKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNAILSIHQLIENTDETFCIDNEALYDICFRTLKLTNPTYGDLNHLVSLTMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALSVPELTQQMFDARNMMAACDPRRGRYLTVACIFRGRMSTREVDEQLLSVQTKNSSYFVEWIPNNVKVAVCDIPPRGLKMAATFIGNNTAIQELFIRVSEQFSAMFRRKAFLHWYT 399
[Close]
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB_TETTH (Tubulin beta chain OS=Tetrahymena thermophila GN=BTU1 PE=1 SV=1)

HSP 1 Score: 546.584 bits (1407), Expect = 7.666e-155
Identity = 260/314 (82.80%), Postives = 280/314 (89.17%), Query Frame = 1 
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVVRKEAE CDCLQGFQ                   K+REEYPDRIM T+SVVPSPKVSDTVVEPYNATLSVHQLVEN DE   IDNEALYDICFRTLKL+TPTYGDLNHLVS  MSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQMFDAKNMM A DPRHGRYLT +A+FRGRMS KEVDEQMLN+QNKNSSYFVEWIPNN+K+++CDIPP+GLKMA TF+GNSTAIQE+FKR++EQFTAMFRRKAFLHWYT
Sbjct:   86 RPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSICDIPPKGLKMAVTFVGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYT 399
[Close]
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB1_PARTE (Tubulin beta chain OS=Paramecium tetraurelia GN=bPT2 PE=3 SV=1)

HSP 1 Score: 546.584 bits (1407), Expect = 7.666e-155
Identity = 260/314 (82.80%), Postives = 280/314 (89.17%), Query Frame = 1 
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVVRKEAE CDCLQGFQ                   K+REEYPDRIM T+SVVPSPKVSDTVVEPYNATLSVHQLVEN DE   IDNEALYDICFRTLKL+TPTYGDLNHLVS  MSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQMFDAKNMM A DPRHGRYLT +A+FRGRMS KEVDEQMLN+QNKNSSYFVEWIPNN+K+++CDIPP+GLKMA TF+GNSTAIQE+FKR++EQFTAMFRRKAFLHWYT
Sbjct:   86 RPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSICDIPPKGLKMAVTFVGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYT 399
[Close]
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB1_SUIBO (Tubulin beta-1 chain OS=Suillus bovinus GN=TUBB1 PE=3 SV=1)

HSP 1 Score: 545.814 bits (1405), Expect = 1.308e-154
Identity = 262/314 (83.44%), Postives = 282/314 (89.81%), Query Frame = 1 
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE  DCLQGFQ                   KIREEYPDR+M TYSVVPSP VSDTVVEPYNATLSVHQLVEN+DET+CIDNEALYDICFRTLKLSTPTYGDLNHLVS  MSG+TTCLRFPGQLN+DLRKLAVNMVPFPRLHFFM GFAPLT+RGSQQYRA+TVPELTQQMFDAKNMMAA DPRHGRYLTVAA+FRG++SMKEV+EQM N+QNKNS+YFVEWIPNNV +A CDIPPRG+KMA TF+GNSTAIQELFKR+S+ FTAMF+RKAFLHWYT
Sbjct:   86 RPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGTDCLQGFQITHSLGGGTGAGMGTLLMSKIREEYPDRMMCTYSVVPSPAVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICFRTLKLSTPTYGDLNHLVSFVMSGITTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMTGFAPLTARGSQQYRAVTVPELTQQMFDAKNMMAASDPRHGRYLTVAAVFRGKVSMKEVEEQMQNVQNKNSAYFVEWIPNNVLSAQCDIPPRGVKMAVTFLGNSTAIQELFKRVSDHFTAMFKRKAFLHWYT 399
[Close]
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB_TETPY (Tubulin beta chain OS=Tetrahymena pyriformis GN=BETA-TT1 PE=3 SV=1)

HSP 1 Score: 544.658 bits (1402), Expect = 2.913e-154
Identity = 259/314 (82.48%), Postives = 280/314 (89.17%), Query Frame = 1 
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVVRKEAE CDCLQGFQ                   K+REEYPDRIM T+SVVPSPKVSDTVVEPYNATLSVHQLVEN DE   IDNEALYDICFRTLKL+TPTYG+LNHLVS  MSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQMFDAKNMM A DPRHGRYLT +A+FRGRMS KEVDEQMLN+QNKNSSYFVEWIPNN+K+++CDIPP+GLKMA TF+GNSTAIQE+FKR++EQFTAMFRRKAFLHWYT
Sbjct:   86 RPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVIDNEALYDICFRTLKLTTPTYGNLNHLVSAAMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSICDIPPKGLKMAVTFVGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYT 399
[Close]
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB_EUPFO (Tubulin beta chain OS=Euplotes focardii PE=3 SV=1)

HSP 1 Score: 544.658 bits (1402), Expect = 2.913e-154
Identity = 260/314 (82.80%), Postives = 281/314 (89.49%), Query Frame = 1 
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE CDCLQGFQ                   KIRE+YPDRIM T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE  CIDNEALYDICFRTLK +TPTYGDLNHLVS  +SGVT+CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQMFDAKNMM A DPRHGRYLT +A+FRGRMS KEVDEQMLN+QNKNSSYFVEWIPNN+K++VCDIPP+GLKM++TFIGNSTAIQE+FKR++EQFTAMFRRKAFLHWYT
Sbjct:   86 RPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREKYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMCIDNEALYDICFRTLKPTTPTYGDLNHLVSAVISGVTSCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCASDPRHGRYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMSSTFIGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYT 399
[Close]
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB_POLAG (Tubulin beta chain OS=Polytomella agilis GN=TUBB1 PE=3 SV=1)

HSP 1 Score: 543.888 bits (1400), Expect = 4.969e-154
Identity = 260/314 (82.80%), Postives = 281/314 (89.49%), Query Frame = 1 
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVVRKEAESCDCLQGFQ                   KIREEYPDR+M T+SVVPSPKVSDTVVEPYNATLSVHQLVEN DE   +DNEALYDICFRTLKL+TPT+GDLNHL+S  MSG+T CLRFPGQLNADLRKLAVN++PFPRLHFFM GF PLTSRGSQQYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRGRMS KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIPP+GLKM+ATFIGNSTAIQE+FKR+SEQFTAMFRRKAFLHWYT
Sbjct:   86 RPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGITCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYT 399
The following BLAST results are available for this feature:
BLAST of FC878179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 426
Match NameE-valueIdentityDescription
TBB_COPC71.650e-15785.03Tubulin beta chain OS=Coprinopsis cinerea (strain ... [more]
TBB_NAEGR1.070e-15684.39Tubulin beta chain OS=Naegleria gruberi PE=2 SV=1[more]
TBB_STYLE1.545e-15583.44Tubulin beta chain OS=Stylonychia lemnae GN=TUBB1 ... [more]
TBB6_CHICK3.441e-15583.44Tubulin beta-6 chain OS=Gallus gallus PE=1 SV=1[more]
TBB_TETTH7.666e-15582.80Tubulin beta chain OS=Tetrahymena thermophila GN=B... [more]
TBB1_PARTE7.666e-15582.80Tubulin beta chain OS=Paramecium tetraurelia GN=bP... [more]
TBB1_SUIBO1.308e-15483.44Tubulin beta-1 chain OS=Suillus bovinus GN=TUBB1 P... [more]
TBB_TETPY2.913e-15482.48Tubulin beta chain OS=Tetrahymena pyriformis GN=BE... [more]
TBB_EUPFO2.913e-15482.80Tubulin beta chain OS=Euplotes focardii PE=3 SV=1[more]
TBB_POLAG4.969e-15482.80Tubulin beta chain OS=Polytomella agilis GN=TUBB1 ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA83DG10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA83DG10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878179 ID=FC878179; Name=FC878179; organism=Citrus clementina; type=EST; length=944bp
CGCCCCGACAACTTCGTGTTCGGACAGTCTGGCGCCGGCAACAACTGGGC
CAAGGGACACTACACAGAGGGCGCCGAGCTCGTCGACTCGGTTCTTGACG
TAGTCCGCAAAGAAGCAGAATCTTGCGATTGCCTCCAAGGTTTCCAACTG
ACACACTCGCTCGGTGGCGGTACCGGATCCGGTATGGGCACCCTACTCAT
CTCCAAAATCAGAGAAGAATACCCCGACAGAATAATGAACACATACTCAG
TAGTCCCCTCACCCAAAGTATCAGATACAGTAGTAGAACCTTACAACGCC
ACTCTCTCAGTCCATCAGCTAGTCGAAAACACAGATGAAACCTATTGTAT
TGACAACGAAGCTCTCTATGACATCTGCTTCCGCACACTCAAGCTATCGA
CACCCACATACGGAGACCTCAACCACCTGGTTTCCCTCACCATGTCCGGC
GTGACGACGTGTCTGCGGTTCCCTGGTCAGCTCAACGCCGATCTCCGCAA
ACTGGCCGTCAACATGGTTCCCTTCCCGCGTCTCCACTTCTTCATGCCTG
GATTCGCGCCCCTCACGTCCCGCGGCAGCCAGCAGTACCGCGCTTTGACC
GTGCCCGAGCTCACCCAACAGATGTTCGACGCCAAGAACATGATGGCCGC
CTGCGACCCGCGCCACGGCCGCTACCTCACCGTGGCCGCCATCTTCCGCG
GACGCATGTCCATGAAGGAGGTCGACGAGCAGATGCTCAACATCCAGAAC
AAGAACTCGTCCTACTTCGTGGAATGGATCCCGAACAACGTGAAGACCGC
CGTGTGCGACATCCCCCCGCGCGGGCTCAAGATGGCCGCCACCTTCATCG
GCAACTCCACCGCCATCCAGGAGCTGTTCAAGCGCATCTCCGAGCAGTTC
ACGGCTATGTTCAGGCGCAAGGCTTTCTTGCATTGGTACACTGG
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