FC878185

Overview
NameFC878185
Unique NameFC878185
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length921
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878185 vs. ExPASy Swiss-Prot
Match: DHSO1_YEAST (Sorbitol dehydrogenase 1 OS=Saccharomyces cerevisiae GN=SOR1 PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.605e-51
Identity = 110/251 (43.82%), Postives = 153/251 (60.96%), Query Frame = 2
Query:  158 NMAAWLMGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS----TNLQDIAEEVEKIQKAMGTGIDVSFDCAG 895
            N A  L  V  + I+   +P++  P+ V + +KA GICGSD+HY ++     +++K PMV+GHE +G + +VG  V  +  GDRVA+EPG+     D  K GRYNLCP M F ATPP+ G+L    + P D   KLP+ VS EEGA  EPLSVG+H+ + A +   T V++ GAGP+GL+T   ARAFGA  ++ VDV D +L  AK+ GA N    S       QD+A+ V+K+    G   DV F+C+G
Sbjct:    6 NPAVVLEKVGDIAIEQRPIPTIKDPHYVKLAIKATGICGSDIHYYRSGGIGKYILKAPMVLGHESSGQVVEVGDAVTRVKVGDRVAIEPGVPSRYSDETKEGRYNLCPHMAFAATPPIDGTLVKYYLSPEDFLVKLPEGVSYEEGACVEPLSVGVHSNKLAGVRFGTKVVVFGAGPVGLLTGAVARAFGATDVIFVDVFDNKLQRAKDFGATNTFNSSQFSTDKAQDLADGVQKL--LGGNHADVVFECSG 254          
BLAST of FC878185 vs. ExPASy Swiss-Prot
Match: DHSO2_YEAST (Sorbitol dehydrogenase 2 OS=Saccharomyces cerevisiae GN=SOR2 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.293e-50
Identity = 109/251 (43.43%), Postives = 152/251 (60.56%), Query Frame = 2
Query:  158 NMAAWLMGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS----TNLQDIAEEVEKIQKAMGTGIDVSFDCAG 895
            N A  L  V  + I+   +P++  P+ V + +KA GICGSD+HY ++     +++K PMV+GHE +G + +VG  V  +  GDRVA+EPG+     D  K G YNLCP M F ATPP+ G+L    + P D   KLP+ VS EEGA  EPLSVG+H+ + A +   T V++ GAGP+GL+T   ARAFGA  ++ VDV D +L  AK+ GA N    S       QD+A+ V+K+    G   DV F+C+G
Sbjct:    6 NPAVVLEKVGDIAIEQRPIPTIKDPHYVKLAIKATGICGSDIHYYRSGGIGKYILKAPMVLGHESSGQVVEVGDAVTRVKVGDRVAIEPGVPSRYSDETKEGSYNLCPHMAFAATPPIDGTLVKYYLSPEDFLVKLPEGVSYEEGACVEPLSVGVHSNKLAGVRFGTKVVVFGAGPVGLLTGAVARAFGATDVIFVDVFDNKLQRAKDFGATNTFNSSQFSTDKAQDLADGVQKL--LGGNHADVVFECSG 254          
BLAST of FC878185 vs. ExPASy Swiss-Prot
Match: DHSO_SCHPO (Putative sorbitol dehydrogenase OS=Schizosaccharomyces pombe GN=tms1 PE=2 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 7.095e-49
Identity = 104/235 (44.26%), Postives = 141/235 (60.00%), Query Frame = 2
Query:  230 YDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNI----VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKNMSTA 919
            + V V +KA GICGSDVHY K     DF++K+PM++GHE AGV+ +VG  V +L PGD VA+EPG  C  CD+C+ GRYNLCP M+F ATPP  G+L    +   D C KLP  +S+EEGA+ EP+SV +HA  R N+   + VL+MG G +GL+ M  A+A+GA  IV VD    R+  A K +GA        K + +L D A+  ++         D + D  G    + TA
Sbjct:   30 HQVKVAIKATGICGSDVHYWKEGGIGDFILKKPMILGHESAGVVVEVGKGVSSLKPGDPVAVEPGCVCRLCDYCRSGRYNLCPHMEFAATPPYDGTLRTYYITTEDFCTKLPKQISVEEGALFEPMSVAVHAMTRGNLKCGSRVLVMGCGTVGLLMMAVAKAYGAIDIVAVDASPSRVEFAQKYVGAKPFTPIAAKENESLPDYAQRYKQAIIEKYGEFDFAVDATGVGICIHTA 264          
BLAST of FC878185 vs. ExPASy Swiss-Prot
Match: XYLD_RHIME (Putative D-xylulose reductase OS=Rhizobium meliloti GN=R02526 PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 6.006e-48
Identity = 102/226 (45.13%), Postives = 142/226 (62.83%), Query Frame = 2
Query:  221 LGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 895
            L P DVL+ ++ VG+CGSDVHY    +   FVV EPM++GHE AGV+ +VGS+V+ L  GDRV +EPGI        K G YN+ P ++F+ATPPVHG L  +VVHPA   ++LPD+VS  EGAM EP ++G+ A  RA I P     +MGAGPIG++T L A A G  ++ + D+   +L V   +GA + I  ++   Q ++E +       G G DV F+C+G
Sbjct:   24 LSPTDVLIGIRTVGVCGSDVHYYTHGKIGPFVVNEPMILGHEAAGVVLEVGSQVRHLKKGDRVCMEPGIPDLSSRSSKLGIYNVDPSVRFWATPPVHGCLTPEVVHPAAFTYRLPDHVSFAEGAMVEPFAIGVQAALRAGIRPGDVGAVMGAGPIGMMTALAALAGGCSKVYVADLAQPKLDV---IGAYEGIETINVRQQAVSEAL--AGATGGWGADVVFECSG 244          
BLAST of FC878185 vs. ExPASy Swiss-Prot
Match: XYL2_YEAST (D-xylulose reductase OS=Saccharomyces cerevisiae GN=XYL2 PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 6.006e-48
Identity = 105/224 (46.88%), Postives = 141/224 (62.95%), Query Frame = 2
Query:  227 PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG-TGIDVSFDCAG 895
            P +V++++KA GICGSD+HY    R A++VV+ PMV+GHE +G++  +G  VKTL  GDRVALEPGI        K GRYNL P +KF ATPP  G+L        D  +KLPD+VS EEGA+ EPLSV +HA + A I      ++ GAGPIGL+    A  FGA  +V VD+ + +L  A++ GA +IV  S +L         I+KA+G  G DV F+C+G
Sbjct:   31 PNEVIIQIKATGICGSDIHYYTHGRIANYVVESPMVLGHESSGIVALIGENVKTLKVGDRVALEPGIPDRFSPEMKEGRYNLDPNLKFAATPPFDGTLTKYYKTMKDFVYKLPDDVSFEEGALIEPLSVAIHANKLAKIKFGARCVVFGAGPIGLLAGKVASVFGAADVVFVDLLENKLETARQFGATHIVN-SGDLPHGVTVDSVIKKAIGKKGADVVFECSG 253          
BLAST of FC878185 vs. ExPASy Swiss-Prot
Match: XYLD_AGRT5 (Putative D-xylulose reductase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=Atu4318 PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.893e-47
Identity = 100/241 (41.49%), Postives = 142/241 (58.92%), Query Frame = 2
Query:  191 LKIQPFELPS------LGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 895
            L ++ F++P       LGP DV +R   VGICGSDVHY    +   FVV  PMV+GHE +G + + GS+V  L  GDRV +EPGI        K G YN+ P ++F+ATPP+HG L  +V+HPA   +KLPDNVS  EGAM EP ++G+ A  RA I P    ++ GAGPIG++  L A A G  ++++ D+   +L +      D I  ++   +++AE V       G G D+ F+C+G
Sbjct:   12 LSLRDFDIPGGAGSGELGPKDVRIRTHTVGICGSDVHYYTHGKIGHFVVNAPMVLGHEASGTVIETGSDVTHLKIGDRVCMEPGIPDPTSRASKLGIYNVDPAVRFWATPPIHGCLTPEVIHPAAFTYKLPDNVSFAEGAMVEPFAIGMQAALRARIQPGDIAVVTGAGPIGMMVALAALAGGCAKVIVADLAQPKLDII--AAYDGIETINIRERNLAEAVSAATD--GWGCDIVFECSG 248          
BLAST of FC878185 vs. ExPASy Swiss-Prot
Match: XYLD_MORMO (D-xylulose reductase OS=Morganella morganii PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 5.084e-47
Identity = 102/225 (45.33%), Postives = 142/225 (63.11%), Query Frame = 2
Query:  221 LGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 895
            LG  DV +++  VGICGSDVHY +  R   FVV EPMV+GHE +GVI   G  VK L  GDRV +EPGI   +    + G YNL P ++F+ATPP+ G L   V+HPA   FKLPDNVS  +GAM EPL++G+ +  +A I P    L++GAG IG++T   A A G   ++I DV D +L VA++    + V  S + Q +A++V ++    G G++V F+C+G
Sbjct:   25 LGDDDVEIKIHTVGICGSDVHYYQHGRIGPFVVDEPMVLGHEASGVITAAGKNVKHLKVGDRVCMEPGIPDLQSPQSRAGIYNLDPAVRFWATPPIDGCLRESVIHPAAFTFKLPDNVSFAQGAMVEPLAIGMQSATKAGIKPGDIGLVIGAGTIGIITQ-SALAGGCSDVIICDVFDEKLKVAEKYQGLHAVN-SKDQQALADKVREL--TGGEGVNVLFECSG 245          
BLAST of FC878185 vs. ExPASy Swiss-Prot
Match: YDJJ_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein ydjJ OS=Escherichia coli (strain K12) GN=ydjJ PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.636e-45
Identity = 100/251 (39.84%), Postives = 153/251 (60.96%), Query Frame = 2
Query:  158 NMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVV-KEP---MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 895
            N  A L    T+KI   E+P     +VL++++ VGICGSDVH  ++     F+  K+P   + +GHECAG +  VGS V+   PGDRV +EPG+ C  C +C  G+YN+CP++ F AT P + G+L + + HP    +KLPDN+   EGA+ EP +VG+HA   A++ P   ++I+GAG IGL+T+   +  GA  I +VDV + RL++A++LGA   V ++   +D     ++  + MG   D+ F+ AG
Sbjct:    3 NSKAILQVPGTMKIISAEIPVPKEDEVLIKVEYVGICGSDVHGFES---GPFIPPKDPNQEIGLGHECAGTVVAVGSRVRKFKPGDRVNIEPGVPCGHCRYCLEGKYNICPDVDFMATQPNYRGALTHYLCHPESFTYKLPDNMDTMEGALVEPAAVGMHAAMLADVKPGKKIIILGAGCIGLMTLQACKCLGATEIAVVDVLEKRLAMAEQLGA--TVVINGAKEDTIARCQQFTEDMGA--DIVFETAG 246          
BLAST of FC878185 vs. ExPASy Swiss-Prot
Match: XYL2_PICST (D-xylulose reductase OS=Pichia stipitis GN=XYL2 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.029e-44
Identity = 100/255 (39.22%), Postives = 145/255 (56.86%), Query Frame = 2
Query:  158 NMAAWLMGVNTLKIQPFELPSLG-PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-------GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI-DVSFDCAG 895
            N +  L  ++ +  + ++ P +  P DVLV++K  GICGSD+H+    R  +FV+ +PMV+GHE AG + +VG  V +L  GD VA+EPGI     D  K G YNLCP M F ATP          G+L      P D   KLPD+VSLE GA+ EPLSVG+HA +  ++     V + GAGP+GL+    A+ FGA  +++VD+ D +L +AK++GA      +          E++ KA G  + +V  +C G
Sbjct:    4 NPSLVLNKIDDISFETYDAPEISEPTDVLVQVKKTGICGSDIHFYAHGRIGNFVLTKPMVLGHESAGTVVQVGKGVTSLKVGDNVAIEPGIPSRFSDEYKSGHYNLCPHMAFAATPNSKEGEPNPPGTLCKYFKSPEDFLVKLPDHVSLELGALVEPLSVGVHASKLGSVAFGDYVAVFGAGPVGLLAAAVAKTFGAKGVIVVDIFDNKLKMAKDIGA-----ATHTFNSKTGGSEELIKAFGGNVPNVVLECTG 253          
BLAST of FC878185 vs. ExPASy Swiss-Prot
Match: XYLD_RHILO (Putative D-xylulose reductase OS=Rhizobium loti GN=mlr4915 PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 8.975e-44
Identity = 96/239 (40.17%), Postives = 137/239 (57.32%), Query Frame = 2
Query:  191 LKIQPFELP-SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNK 904
            L ++   LP  +GP DV + +  VG+CGSDVHY        +VV+ PMV+GHE AG + + G+ V+T   GDRV +EPG+        K G YN+ P++ F+ATPPVHG LA   VHPA   +KLPDNVS  EGAM EP ++G+ A  RA I P    +++G GPIG++  L A A G  +++I D    +L +A +     IV V+   + + + V       G   D+ F+ +G  K
Sbjct:   12 LSLREIALPLDVGPDDVKIAIHTVGVCGSDVHYYTHGAIGSYVVRAPMVLGHEAAGTVVETGANVETFKAGDRVCMEPGVPNLSSRATKLGIYNVDPDVSFWATPPVHGVLAPYAVHPAAFTYKLPDNVSFAEGAMVEPFAIGMQAASRARIVPGDVAVVVGCGPIGIMIALAALAGGCSKVLISDFSAPKLKIAAQYA--GIVPVNIGERSLVDAVAAATDKWGA--DIVFEASGSPK 246          
The following BLAST results are available for this feature:
BLAST of FC878185 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 331
Match NameE-valueIdentityDescription
DHSO1_YEAST2.605e-5143.82Sorbitol dehydrogenase 1 OS=Saccharomyces cerevisi... [more]
DHSO2_YEAST1.293e-5043.43Sorbitol dehydrogenase 2 OS=Saccharomyces cerevisi... [more]
DHSO_SCHPO7.095e-4944.26Putative sorbitol dehydrogenase OS=Schizosaccharom... [more]
XYLD_RHIME6.006e-4845.13Putative D-xylulose reductase OS=Rhizobium melilot... [more]
XYL2_YEAST6.006e-4846.88D-xylulose reductase OS=Saccharomyces cerevisiae G... [more]
XYLD_AGRT53.893e-4741.49Putative D-xylulose reductase OS=Agrobacterium tum... [more]
XYLD_MORMO5.084e-4745.33D-xylulose reductase OS=Morganella morganii PE=1 S... [more]
YDJJ_ECOLI1.636e-4539.84Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
XYL2_PICST4.029e-4439.22D-xylulose reductase OS=Pichia stipitis GN=XYL2 PE... [more]
XYLD_RHILO8.975e-4440.17Putative D-xylulose reductase OS=Rhizobium loti GN... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA83DG12RM1 IVIA1 Citrus clementina cDNA clone IC0AAA83DG12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878185 ID=FC878185; Name=FC878185; organism=Citrus clementina; type=EST; length=921bp
AAATCATATCCCATATCCAGAATCAGAATAAATGGTAGCTTAAAATGTTG
TGTACAGAGTGAAGTCTCTTCTGTGCACTTGTGTTTTTGAAGGGTAAAAA
GCAAATATGGGCAAAGGAGGGATGTCACAAGGAGAAAAGAAGGATGGAGA
AGAAGTTAACATGGCAGCTTGGCTTATGGGTGTCAACACCCTCAAGATTC
AACCTTTTGAGCTTCCTTCTCTGGGACCATATGATGTTTTAGTCAGGATG
AAAGCCGTTGGTATTTGTGGAAGTGATGTGCATTATCTCAAGACCTTGAG
GTGTGCCGATTTTGTTGTGAAAGAGCCTATGGTGATTGGGCACGAGTGTG
CTGGGGTCATAGAGAAGGTGGGAAGCGAGGTGAAGACTTTGGTGCCCGGT
GACCGTGTGGCCCTGGAACCCGGGATCAGCTGCTGGCGATGCGATCACTG
CAAAGGAGGTCGATACAATTTGTGTCCAGAGATGAAATTTTTTGCAACTC
CGCCCGTTCATGGTTCCCTGGCTAATCAGGTGGTGCATCCTGCAGACCTA
TGTTTTAAGCTGCCGGACAATGTGAGCCTGGAGGAAGGGGCTATGTGTGA
GCCCTTGAGTGTTGGTCTTCATGCCTGCCGCCGTGCCAATATCGGTCCTG
AGACAAATGTGCTTATCATGGGAGCAGGGCCCATAGGACTTGTCACAATG
CTAGGAGCTCGTGCTTTTGGAGCTCCTAGAATTGTCATTGTGGATGTGGA
TGACTATCGTTTATCTGTTGCAAAGGAACTTGGTGCAGATAATATTGTTA
AAGTTTCAACAAATTTGCAGGACATAGCTGAAGAAGTGGAAAAGATACAG
AAAGCCATGGGGACAGGAATAGATGTGAGCTTTGATTGTGCAGGCTTTAA
CAAAAACATGTCAACAGCACT
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