FC878194

Overview
NameFC878194
Unique NameFC878194
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length807
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878194 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUAB (Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.946e-12
Identity = 55/161 (34.16%), Postives = 81/161 (50.31%), Query Frame = 3
Query:  357 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT-TSAFALSS---------GVGAWNAVVFEIVMT-FGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVS--WSWDNHWVYWVGPLIG 800
            ISGGH NPAV+ G  V G +     I YW+AQ+LG+  A  +L  + +G+   SA  L+S         G      ++ EI++T F ++  + +T+     G     APIAIGF +    L        S+NPA S G AL +   +    W++WV PL+G
Sbjct:   57 ISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG----FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVALFADRAALSQLWLFWVAPLVG 213          
BLAST of FC878194 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUA2 (Aquaporin Z OS=Brucella abortus (strain 2308) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.946e-12
Identity = 55/161 (34.16%), Postives = 81/161 (50.31%), Query Frame = 3
Query:  357 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT-TSAFALSS---------GVGAWNAVVFEIVMT-FGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVS--WSWDNHWVYWVGPLIG 800
            ISGGH NPAV+ G  V G +     I YW+AQ+LG+  A  +L  + +G+   SA  L+S         G      ++ EI++T F ++  + +T+     G     APIAIGF +    L        S+NPA S G AL +   +    W++WV PL+G
Sbjct:   57 ISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG----FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVALFADRAALSQLWLFWVAPLVG 213          
BLAST of FC878194 vs. ExPASy Swiss-Prot
Match: AQPZ1_AGRT5 (Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.320e-12
Identity = 63/220 (28.64%), Postives = 91/220 (41.36%), Query Frame = 3
Query:  183 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT---TSAFALS-------SGVGAWNAVVFEIVMT-FGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGG 803
            R  ++EF+ T   VF G GS +        G                           ISGGH NPAV+ G  V G       + Y +AQ+LG+ VA   L  +  G+       FA +        G    +A++ EI++T F LV  + +T      G     AP+AIG  +    L        S+NPA S G AL    W+    W++W+ P++GG
Sbjct:    3 RKFISEFLGTFWLVFGGCGSAVFAAAFPELGIG----FLGVAFAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGKFPAANLVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLVVILGSTHGRVPVG----FAPVAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPILGG 214          
BLAST of FC878194 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBPA (Aquaporin Z OS=Vibrio parahaemolyticus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.663e-12
Identity = 55/165 (33.33%), Postives = 80/165 (48.48%), Query Frame = 3
Query:  354 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ-----TTSAFALSSGVGAWN--------AVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGG 803
            +ISG H+NPAVT G + GG         Y IAQ++G  +A  +L  +  GQ       S FA ++G G  +        A+V EIVMT  +++ +       K+   G  APIAIG  +    L        S+NPA S   A+    W+    W++WV P++GG
Sbjct:   55 HISGCHLNPAVTVGLWAGGRFDTKDVAPYIIAQVIGGLIAGGILYVIATGQAGFDVVGSGFA-ANGYGEHSPGQYSMLAALVSEIVMT--MMFLIVIMGATDKRAPQG-FAPIAIGLCLTLIHLISIPVTNTSVNPARSTAVAMYVGDWAVSQLWLFWVAPIVGG 215          
BLAST of FC878194 vs. ExPASy Swiss-Prot
Match: AQPZ2_AGRT5 (Aquaporin Z 2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ2 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.663e-12
Identity = 65/220 (29.55%), Postives = 89/220 (40.45%), Query Frame = 3
Query:  183 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT---TSAFALS-------SGVGAWNAVVFEIVMT-FGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGG 803
            R  LAEF  T   VF G GS +        G                           ISGGH NPAV+ G  V G       + Y IAQ+ G+ VA   L  +  G+       FA +        G    +A++ EI++T F L+  + +T      G     APIAIG  +    L        S+NPA S G AL    W+    W++W+ P++GG
Sbjct:    3 RKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVG----GISGGHFNPAVSVGLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGRVPAG----FAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGG 214          
BLAST of FC878194 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUME (Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.261e-11
Identity = 54/161 (33.54%), Postives = 80/161 (49.69%), Query Frame = 3
Query:  357 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT-TSAFALSS---------GVGAWNAVVFEIVMT-FGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIG 800
            ISGGH NPAV+ G  V G +     I YW+AQ+LG+  A  +L  + +G+   SA  L+S         G      ++ EI++T F ++  + +T+     G     APIAIGF +    L         +NPA S G AL   + +    W++WV PL+G
Sbjct:   57 ISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG----FAPIAIGFGLTLIHLVSIPVTNTWVNPARSTGVALFADTAALSQLWLFWVAPLVG 213          
BLAST of FC878194 vs. ExPASy Swiss-Prot
Match: AQPZ_BORPA (Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.648e-11
Identity = 53/164 (32.32%), Postives = 77/164 (46.95%), Query Frame = 3
Query:  354 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG-----QTTSAFALSSGVGAWN--------AVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIG 800
            +ISGGH NPAVT G    G         Y +AQ++G+ VA   L  +  G        S FA ++G G  +        A++ EIV++ G V+ +       K+   G  API IG  +    L        S+NPA S GPAL    W+ +  W++W+ P+ G
Sbjct:   59 HISGGHFNPAVTVGLAASGRFGWRDVPPYIVAQVVGAIVAAATLASIAQGVAGFDLVASKFA-ANGYGDHSPGKYSMQAALICEIVLSAGFVFVILGAT--DKRAPAG-FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPALFVGGWALEQLWLFWLAPIAG 218          
BLAST of FC878194 vs. ExPASy Swiss-Prot
Match: AQPZ_BORBR (Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.648e-11
Identity = 53/164 (32.32%), Postives = 77/164 (46.95%), Query Frame = 3
Query:  354 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG-----QTTSAFALSSGVGAWN--------AVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIG 800
            +ISGGH NPAVT G    G         Y +AQ++G+ VA   L  +  G        S FA ++G G  +        A++ EIV++ G V+ +       K+   G  API IG  +    L        S+NPA S GPAL    W+ +  W++W+ P+ G
Sbjct:   59 HISGGHFNPAVTVGLAASGRFGWRDVPPYIVAQVVGAIVAAATLASIAQGVAGFDLVASKFA-ANGYGDHSPGKYSMQAALICEIVLSAGFVFVILGAT--DKRAPAG-FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPALFVGGWALEQLWLFWLAPIAG 218          
BLAST of FC878194 vs. ExPASy Swiss-Prot
Match: AQPM_ARCFU (Probable aquaporin aqpM OS=Archaeoglobus fulgidus GN=aqpM PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.648e-11
Identity = 59/225 (26.22%), Postives = 91/225 (40.44%), Query Frame = 3
Query:  195 AEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX-------------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS-----GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSW-----SWDNHWVYWVGPLIG 800
            AE + T I VF G G+ +    +  NGA+ P+                                   ISG H+NPAVT   +  G       + Y +AQ +G+ +  LL          +   L +     G+G   A++ E + TF L+  +   A+D +  +    A + IG  VG  I   G   G+S+NPA +FGP L         W    +Y +GP++G
Sbjct:   11 AEVVGTFILVFFGPGAAV-ITLMIANGADKPNEFNIGIGALGGLGDWFAIGMAFALAIAAVIYSLGRISGAHINPAVTIALWSIGRFPGREVVPYIVAQFIGAALGSLLFLACVGPAAATVGGLGATAPFPGIGYGQAILTEAIGTFLLMLVIMGVAVDER--APPGFAGLVIGLTVGGIITTIGNITGSSLNPARTFGPYLGDSLMGINLWQYFPIYVIGPIVG 232          
BLAST of FC878194 vs. ExPASy Swiss-Prot
Match: AQP_ENTBH (Aquaporin OS=Enterocytozoon bieneusi (strain H348) GN=AQP PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.152e-11
Identity = 43/166 (25.90%), Postives = 74/166 (44.58%), Query Frame = 3
Query:  360 SGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLG------STVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDP------------KKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGG 803
            S  H NPA+T  A   G + +L GI Y IAQL+G       TV C    ++   +  ++  +S  +   N    E +++F LV+  +   ++             K+      AP+ IG  +G          G + NP + +GPA++  ++D+  +Y +  L GG
Sbjct:   64 SVAHFNPAITIAAICTGKLDILLGIGYVIAQLIGFILATLLTVVCFPYGYLKTMEFIASARISDDISTVNLFFTEFILSFILVFIAFEVGINAIREPGVTLFVGIKQIDRSKFAPLTIGITLGFLAFLASTTSGGAFNPGIVWGPAIMGGNFDDFVIYIISELSGG 229          
The following BLAST results are available for this feature:
BLAST of FC878194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 182
Match NameE-valueIdentityDescription
AQPZ_BRUAB1.946e-1234.16Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1[more]
AQPZ_BRUA21.946e-1234.16Aquaporin Z OS=Brucella abortus (strain 2308) GN=a... [more]
AQPZ1_AGRT53.320e-1228.64Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain... [more]
AQPZ_VIBPA5.663e-1233.33Aquaporin Z OS=Vibrio parahaemolyticus GN=aqpZ PE=... [more]
AQPZ2_AGRT55.663e-1229.55Aquaporin Z 2 OS=Agrobacterium tumefaciens (strain... [more]
AQPZ_BRUME1.261e-1133.54Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV... [more]
AQPZ_BORPA1.648e-1132.32Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE... [more]
AQPZ_BORBR1.648e-1132.32Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ P... [more]
AQPM_ARCFU1.648e-1126.22Probable aquaporin aqpM OS=Archaeoglobus fulgidus ... [more]
AQP_ENTBH2.152e-1125.90Aquaporin OS=Enterocytozoon bieneusi (strain H348)... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA33CF04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA33CF04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878194 ID=FC878194; Name=FC878194; organism=Citrus clementina; type=EST; length=807bp
CAAAAACTACGCATTTCGAATATAAGTAGAAGCTCCTAGTTGAGAAGTGG
AGACCAGTACACTTACGTGAACCAGTAGTAATCACACCCCAAAGGTTCAA
TCTTCATCGTTTGATCTCCATCATGCCGATCAGAAACATTGCCGTTGGCC
ATCCCCGTGAGGCGACTCATCCAGATGCCCTAAGGGCAGCCCTAGCAGAG
TTCATCTCAACTCTAATATTTGTCTTTGCCGGTGAAGGCTCGGGCATGGC
CTTCAACAAGCTCACTCACAACGGCGCCAACACCCCCTCCGGCCTCGTCG
CCGCCTCTGTTGCTCACGCTTTCGCCCTTTTCGTTGCTGTCGCCGTTGGC
GCCAACATTTCCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCGCCTT
CGTTGGAGGTAACATCTCCCTTCTACGAGGCATCCTCTACTGGATCGCCC
AGCTTCTTGGATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTACCAAC
GGCCAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCATGGAA
CGCAGTCGTTTTCGAGATCGTGATGACATTCGGACTAGTGTACACAGTGT
ATGCCACAGCCCTGGACCCAAAGAAGGGAAGCTTGGGGACAATTGCACCA
ATTGCAATTGGTTTCATTGTAGGAGCCAACATCTTGGCGGGCGGGGCGTT
TGATGGAGCTTCAATGAACCCAGCAGTGTCATTCGGGCCAGCTTTGGTAA
GCTGGAGCTGGGACAATCACTGGGTCTACTGGGTCGGGCCACTCATCGGT
GGTGGGC
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