FC878195

Overview
NameFC878195
Unique NameFC878195
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length924
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878195 vs. ExPASy Swiss-Prot
Match: EMI2_YEAST (Putative glucokinase-2 OS=Saccharomyces cerevisiae GN=EMI2 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.277e-29
Identity = 88/207 (42.51%), Postives = 110/207 (53.14%), Query Frame = 3
Query:  363 VDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVS--IPQELMCG---TSEELFDFIATGLAKFAEKEAGKFHLPQG---RQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDM-RVSALVNDTVGTLAGARYW-----------DEDVMGAVILGTGTNAC 923
            VD G  L MI +YV +LP G ERG+  A DLGGT+FRV  V L G        + +Q+   IP+E +     TSEELF ++      F  K   +     G   +  ++GFTFS+PV QTS+ SG LI+WTK F +  T GKDVV    E ++ QGL M  V AL NDTVGT     Y             E V+G  I GTGTN C
Sbjct:   58 VDKG--LPMIPTYVTSLPNGTERGVLLAADLGGTHFRVCSVTLNGDG----TFDMQQLKSKIPEEYLNDKDVTSEELFSYLGRRTRAFVRKHHPELLKSTGENIKPLKMGFTFSYPVDQTSLSSGTLIRWTKSFKIEDTVGKDVVRLYQEQLDIQGLSMINVVALTNDTVGTFLSHCYTSGSRPSSAGEISEPVIGC-IFGTGTNGC 257          
BLAST of FC878195 vs. ExPASy Swiss-Prot
Match: HXKA_YEAST (Hexokinase-1 OS=Saccharomyces cerevisiae GN=HXK1 PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 3.115e-28
Identity = 82/238 (34.45%), Postives = 117/238 (49.16%), Query Frame = 3
Query:  216 PRFTMAVRSDVNVSVAPILTKLQKECATPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGT-SEELFDFIATGLAKFAEKEA---GKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMGAVILGTGTN 917
            P+      +DV   +   + +L+         LR V      ++  GL   GG  + MI  +V   PTG E G + A+DLGGTN RV+ V+L G       T   +  +P ++      EEL+ FIA  L  F  ++     K  LP      +GFTFS+P  Q  I+ G+L +WTKGF +    G DVV  L   + ++ L + + AL+NDTVGTL  + Y D +    VI GTG N
Sbjct:    9 PQARKGSMADVPKELMDEIHQLEDMFTVDSETLRKVVKHFIDELNKGLTKKGGN-IPMIPGWVMEFPTGKESGNYLAIDLGGTNLRVVLVKLSGNH--TFDTTQSKYKLPHDMRTTKHQEELWSFIADSLKDFMVEQELLNTKDTLP------LGFTFSYPASQNKINEGILQRWTKGFDIPNVEGHDVVPLLQNEISKRELPIEIVALINDTVGTLIASYYTDPETKMGVIFGTGVN 237          
BLAST of FC878195 vs. ExPASy Swiss-Prot
Match: HXK2_SCHPO (Hexokinase-2 OS=Schizosaccharomyces pombe GN=hxk2 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.182e-25
Identity = 74/218 (33.94%), Postives = 109/218 (50.00%), Query Frame = 3
Query:  276 KLQKECATPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTS-EELFDFIATGLAKFAEKE-AGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW--DEDVMGAVILGTGTN 917
            KL  +   P   LR          + GL  +G   L M  +++  LPTG E G F ALD GGTN RV  +QL G  +     +  +  +P+E +   S + + DF++  +  F ++    KF  P+     +GFTFS+P  Q SI    L++WTKG ++     KD    L E  + + L +R+ A++NDTVGTL    Y   + D    +I GTGTN
Sbjct:   11 KLVNDFEYPTESLREAVKEFDELRQKGLQKNGE-VLAMAPAFISTLPTGAETGDFLALDFGGTNLRVCWIQLLGDGK--YEMKHSKSVLPRECVRNESVKPIIDFMSDHVELFIKEHFPSKFGCPEEEYLPMGFTFSYPANQVSITESYLLRWTKGLNIPEAINKDFAQFLTEGFKARNLPIRIEAVINDTVGTLVTRAYTSKESDTFMGIIFGTGTN 225          
BLAST of FC878195 vs. ExPASy Swiss-Prot
Match: HXKG_KLULA (Glucokinase-1 OS=Kluyveromyces lactis GN=GLK1 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.380e-25
Identity = 80/194 (41.24%), Postives = 105/194 (54.12%), Query Frame = 3
Query:  381 LKMILSYVDALPTGNERGL-FYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIP----QELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGL-DMRVSALVNDTVGTLAGARYWDEDVMGAV-------ILGTGTNAC 923
            L MI ++V   P+G E G+   A DLGGTNFRV  V+L G  E     E E+  IP    Q+    TS++LF  +A    +F  K      + Q  + ++GFTFS+PV QTS+ SG LI+WTKGF +  T G+DVV    + +   GL ++ V AL NDT GTL    Y   D   A+       I GTGTN C
Sbjct:   52 LPMIPTFVTDKPSGQEHGVTMLAADLGGTNFRVCSVELLGNHEF--KIEQEKSKIPTFFFQDDHHVTSKDLFQHMALITHQFLTKHHKD--VIQDYKWKMGFTFSYPVDQTSLSSGKLIRWTKGFKIGDTVGQDVVQLFQQELNDIGLSNVHVVALTNDTTGTLLARCYASSDAARAINEPVIGCIFGTGTNGC 241          
BLAST of FC878195 vs. ExPASy Swiss-Prot
Match: HXK1_DROME (Hexokinase type 1 OS=Drosophila melanogaster GN=Hex-t1 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.941e-23
Identity = 70/208 (33.65%), Postives = 109/208 (52.40%), Query Frame = 3
Query:  312 LRNVADAMTADMRAGLVVD--GGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFA-EKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMER-QGLDMRVSALVNDTVGTLAGARYWDEDVMGAVILGTGTNAC 923
            L  + +AM  ++  GL  D      +   LSYV  LPTG ERG F AL++  TN R++ V+     ER   T  + V +P  +  G   E+F F+AT +A F  EK+  K +LP      +G  F+F +K+ ++D G+L+ WTK F   G  GKDVV  L +A+ +   + + V  ++N   G+L    +   D    +I+G+  N+C
Sbjct:   28 LEKIKNAMDREITMGLSRDHHDRSTVPCHLSYVQDLPTGRERGQFLALEMMPTNCRIMLVKFSS--ERDIYTSSKCVIMPHTVAAGRGTEVFTFLATSIANFVKEKKVDKDNLP------LGIAFAFTLKKLALDVGILVSWTKEFGAQGAIGKDVVQLLRDALAKFPEISVDVMGIINVGAGSLLALCWAQPDTRIGLIMGSIANSC 227          
BLAST of FC878195 vs. ExPASy Swiss-Prot
Match: HXK_PLAFA (Hexokinase OS=Plasmodium falciparum GN=HK PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.656e-21
Identity = 68/198 (34.34%), Postives = 100/198 (50.51%), Query Frame = 3
Query:  384 KMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGG-----QEERVQATEFE-QVSIPQELM--CGTSEELFDFIATGLAKFAEKEAGKFH-LPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTA-----GKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARY----WDEDVMGAVILGTGTNAC 923
            KM+ S +  +PTG E+G +YA+D GGTNFR +R  L G     +++   + +F    S  + L+    T+ +LFD  A  +        G+F+ L     + +GFTFSFP    SI+  +LI WTKGF           G+DV   +N+A  R  +  +V  ++ND VGTL    Y            +ILGTG+N C
Sbjct:   80 KMLDSCIANIPTGQEKGTYYAIDFGGTNFRAVRASLDGKGKIKRDQETYSLKFTGSYSHEKGLLDKHATASQLFDHFAERIKYI----MGEFNDLDNKEVKSVGFTFSFPCTSPSINCSILIDWTKGFETGRATNDPVEGRDVCKLMNDAFVRAAIPAKVCCVLNDAVGTLMSCAYQKGRGTPPCYIGIILGTGSNGC 273          
BLAST of FC878195 vs. ExPASy Swiss-Prot
Match: HXK1_ASPFU (Hexokinase-1 OS=Aspergillus fumigatus GN=hxkA PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.402e-20
Identity = 64/182 (35.16%), Postives = 102/182 (56.04%), Query Frame = 3
Query:  387 MILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQ-EERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQR---EIGFTFSFPVKQTSIDSGVLIKWTKGFSVS-GTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMGAVILGTGTN 917
            M+ SY  ALP+G E+G + ALD+GG+ FRV  ++LGG    ++       +    +L+ GT    FD++A  +          +    GR+     +G ++SFP++QTSI SG++I   KGF  S GT G+++   + ++  R+ L++RV A+VND+   L    Y D     ++ILGTGTN
Sbjct:   96 MLPSYNHALPSGTEKGTYLALDVGGSTFRVALIELGGAGAMKILQESSSPIDNDVKLLEGTL--FFDWMAEKIESMLSAVGADY----GREAVPLSMGLSWSFPIEQTSISSGLVIHMGKGFLCSNGTLGQELGDLIVQSCRRRSLNVRVDAIVNDSSAALLSRAYVDPKTRMSLILGTGTN 271          
BLAST of FC878195 vs. ExPASy Swiss-Prot
Match: HXK_TOXGO (Hexokinase OS=Toxoplasma gondii GN=HXK PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.238e-18
Identity = 69/203 (33.99%), Postives = 99/203 (48.77%), Query Frame = 3
Query:  381 LKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEER--------VQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAE-----KEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSV-----SGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARY----WDEDVMGAVILGTGTNAC 923
            +KM+ S V  LPTG E G  YA+D GG+  R +R  L G+ +         +++ E        +   G  +ELFD  A  +    +     K+A + + P      +GFTFSFP  Q +++S  LI+WTKGF           GKDV   L +A++R  +     A+VNDTVGTL    Y       +    +I+GTG NAC
Sbjct:   62 MKMLDSCVSNLPTGAEVGEAYAIDFGGSTCRAVRCSLLGKGKMEIIQDKICLRSAEHRCAKGFMDKKAG-GKELFDQFAMCIRGLMDRSGDLKKAEETNTPV----PVGFTFSFPCAQAALNSSFLIEWTKGFETGRENPDRVEGKDVAVLLADALQRHNVPAVCKAIVNDTVGTLVSCAYQRVPGTPECRVGLIIGTGFNAC 259          
The following BLAST results are available for this feature:
BLAST of FC878195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
EMI2_YEAST6.277e-2942.51Putative glucokinase-2 OS=Saccharomyces cerevisiae... [more]
HXKA_YEAST3.115e-2834.45Hexokinase-1 OS=Saccharomyces cerevisiae GN=HXK1 P... [more]
HXK2_SCHPO7.182e-2533.94Hexokinase-2 OS=Schizosaccharomyces pombe GN=hxk2 ... [more]
HXKG_KLULA9.380e-2541.24Glucokinase-1 OS=Kluyveromyces lactis GN=GLK1 PE=1... [more]
HXK1_DROME3.941e-2333.65Hexokinase type 1 OS=Drosophila melanogaster GN=He... [more]
HXK_PLAFA1.656e-2134.34Hexokinase OS=Plasmodium falciparum GN=HK PE=3 SV=... [more]
HXK1_ASPFU1.402e-2035.16Hexokinase-1 OS=Aspergillus fumigatus GN=hxkA PE=2... [more]
HXK_TOXGO2.238e-1833.99Hexokinase OS=Toxoplasma gondii GN=HXK PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA55AC01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA55AC01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878195 ID=FC878195; Name=FC878195; organism=Citrus clementina; type=EST; length=924bp
AAACTGTTGAAACCTTGCTATCAAGAAAAAAGTGAAACAAAAACACTACA
CACTATGCACCTCTCTGTCTGAACCTCACAATTTTCTTTACTCTTCATCT
TATTTTATTTTTCTTTCTGCTTAGATCTTACCGTCAACCGAAAATGTTCG
TTACTGCAACAGCAATGTTACCGGCCGTTGGATCCCTCTGCATCTCGCGG
TCACCCAGAGGCGGGCCTCGGTTTACGATGGCCGTAAGATCAGACGTTAA
TGTGTCAGTTGCTCCGATCTTGACAAAGCTACAGAAAGAGTGTGCAACTC
CTTTGCCCGTTCTGCGCAACGTGGCGGACGCCATGACTGCTGATATGAGA
GCTGGGCTTGTTGTTGATGGGGGTGGCGAACTCAAGATGATACTTAGCTA
TGTCGATGCTTTGCCAACTGGGAATGAGAGAGGATTGTTCTATGCATTGG
ATCTTGGAGGCACAAACTTTAGGGTGCTAAGGGTGCAATTAGGTGGGCAA
GAAGAGCGTGTTCAAGCTACAGAATTTGAACAAGTTTCTATCCCTCAAGA
GCTCATGTGTGGTACCTCTGAGGAGCTTTTTGATTTTATTGCAACTGGCC
TGGCAAAATTTGCGGAAAAGGAAGCTGGAAAATTTCACTTGCCCCAAGGG
AGGCAGAGGGAAATTGGATTTACATTTTCTTTCCCCGTGAAGCAGACATC
GATTGATTCTGGCGTACTAATTAAATGGACAAAGGGTTTCTCTGTCTCTG
GTACGGCGGGAAAGGATGTAGTTGCTTGTTTAAATGAAGCAATGGAAAGG
CAAGGATTAGATATGCGAGTGTCTGCCCTGGTTAATGATACCGTGGGCAC
ATTAGCCGGGGCTAGATACTGGGATGAAGATGTCATGGGTGCTGTCATTT
TGGGTACTGGAACCAATGCTTGCT
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