FC878202
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: CH60_CUPTR (60 kDa chaperonin OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=groL PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.233e-11 Identity = 36/127 (28.35%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 203 KAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIV----HPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAK 571 +A++V +N +A+ V+ TLGP+G + ++ G T++ DG ++ K +++ + A+++ ++A GDGTTT +LA +RE F+ G++P +L R A A++++K+++K Sbjct: 13 RAKMVEGVNI---LANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKFVAAGMNPMDLKRGIDKAVGAAVEELKKISK 136
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: CH60_COPPD (60 kDa chaperonin OS=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) GN=groL PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.233e-11 Identity = 48/168 (28.57%), Postives = 82/168 (48.81%), Query Frame = 2 Query: 242 VADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHP----AAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGG-EKEFFASMVVDAVGAIGDGDRLNM 730 ++ V++TLGP+G ++ G+ I+NDG TI K +D+ P A++ ++A + GDGTTT +LA +RE + G +P L R A ++IK+L++ + G KR +++ A + + IG E + D V + +G L M Sbjct: 23 LSKAVKATLGPKGRYVVLERKFGSPLITNDGVTIAKEIDLEDPYENLGAQLAKEVASKTNDVAGDGTTTATVLAEAMVREGMKNVTAGANPIALRRGIEKAVEAVTEEIKKLSRPVSG------KRDITEVATISAKDQQIGSIIAEAMEKVGKDGVVTVEEGKSLGM 184
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: CH60_BURTH (60 kDa chaperonin OS=Burkholderia thailandensis GN=groL PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.233e-11 Identity = 35/127 (27.56%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 203 KAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIV----HPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAK 571 +A++V +N +A+ V+ TLGP+G + ++ G T++ DG ++ K +++ + A+++ ++A GDGTTT +LA +RE ++ G++P +L R A A++++K+++K Sbjct: 13 RAKMVEGVNI---LANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVAAAVEELKKISK 136
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: CH60_BURMS (60 kDa chaperonin OS=Burkholderia mallei (strain SAVP1) GN=groL PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.233e-11 Identity = 35/127 (27.56%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 203 KAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIV----HPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAK 571 +A++V +N +A+ V+ TLGP+G + ++ G T++ DG ++ K +++ + A+++ ++A GDGTTT +LA +RE ++ G++P +L R A A++++K+++K Sbjct: 13 RAKMVEGVNI---LANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVAAAVEELKKISK 136
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: CH60_BURMA (60 kDa chaperonin OS=Burkholderia mallei GN=groL PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.233e-11 Identity = 35/127 (27.56%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 203 KAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIV----HPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAK 571 +A++V +N +A+ V+ TLGP+G + ++ G T++ DG ++ K +++ + A+++ ++A GDGTTT +LA +RE ++ G++P +L R A A++++K+++K Sbjct: 13 RAKMVEGVNI---LANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVAAAVEELKKISK 136
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: CH60_BURM9 (60 kDa chaperonin OS=Burkholderia mallei (strain NCTC 10229) GN=groL PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.233e-11 Identity = 35/127 (27.56%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 203 KAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIV----HPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAK 571 +A++V +N +A+ V+ TLGP+G + ++ G T++ DG ++ K +++ + A+++ ++A GDGTTT +LA +RE ++ G++P +L R A A++++K+++K Sbjct: 13 RAKMVEGVNI---LANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVAAAVEELKKISK 136
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: CH60_BURM7 (60 kDa chaperonin OS=Burkholderia mallei (strain NCTC 10247) GN=groL PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.233e-11 Identity = 35/127 (27.56%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 203 KAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIV----HPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAK 571 +A++V +N +A+ V+ TLGP+G + ++ G T++ DG ++ K +++ + A+++ ++A GDGTTT +LA +RE ++ G++P +L R A A++++K+++K Sbjct: 13 RAKMVEGVNI---LANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVAAAVEELKKISK 136
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: CH60_BUCCM (60 kDa chaperonin OS=Buchnera aphidicola subsp. Chaetophorus leucomelas GN=groL PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.233e-11 Identity = 53/221 (23.98%), Postives = 106/221 (47.96%), Query Frame = 2 Query: 194 SQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIV----HPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGT-MRDSF-LVNGVAFKKTFSYAGFEQQPK 838 S+ +A+++ +N +AD V+ TLGP+G + ++ G +I+ DG ++ + +++ + A+++ ++A + GDGTTT LLA + E + G++P +L R A KA++++K+L+ S A T + E S++ +A+ +G+ G+ V GT + D +V G+ F + + F +P+ Sbjct: 10 SEARAKMLRGVNI---LADAVKVTLGPKGRNVVLDKSFGAPSITKDGVSVAREIELEDKFENMGAQMVKEVASKANDVAGDGTTTATLLAQSIVNEGLKAVAAGMNPMDLKRGIDQAVIKAVKELKKLSVP------------CSDSKAITQVGTISANADETVGSLISEAMDKVGND------GVITVEEGTGLEDELDVVKGMQFDRGYLSPYFINKPE 209
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: CH60_BORPE (60 kDa chaperonin OS=Bordetella pertussis GN=groL PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.233e-11 Identity = 52/221 (23.53%), Postives = 105/221 (47.51%), Query Frame = 2 Query: 197 QGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHP----AAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDSFL--VNGVAFKKTFSYAGFEQQPKK 841 + + ++V +N +A+ V++TLGP+G + ++ G T++ DG ++ K +++ A+++ D+A GDGTTT +LA ++E ++ G +P +L R A A++++K+L+K + K + + + S IG ++ DA+ D++ G+ V G ++ L V G+ F + + F P+K Sbjct: 11 EARVRIVRGVNV---LANAVKTTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKFENIGAQLVKDVASKTSDNAGDGTTTATVLAQAVVQEGLKYVAAGFNPIDLKRGIDKAVAAAVEELKKLSKPV-----TTSKEIAQVGSISANSDASIG-------QIIADAM------DKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINSPEK 210
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: CH60_BORPA (60 kDa chaperonin OS=Bordetella parapertussis GN=groL PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.233e-11 Identity = 52/221 (23.53%), Postives = 105/221 (47.51%), Query Frame = 2 Query: 197 QGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHP----AAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDSFL--VNGVAFKKTFSYAGFEQQPKK 841 + + ++V +N +A+ V++TLGP+G + ++ G T++ DG ++ K +++ A+++ D+A GDGTTT +LA ++E ++ G +P +L R A A++++K+L+K + K + + + S IG ++ DA+ D++ G+ V G ++ L V G+ F + + F P+K Sbjct: 11 EARVRIVRGVNV---LANAVKTTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKFENIGAQLVKDVASKTSDNAGDGTTTATVLAQAVVQEGLKYVAAGFNPIDLKRGIDKAVAAAVEELKKLSKPV-----TTSKEIAQVGSISANSDASIG-------QIIADAM------DKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINSPEK 210 The following BLAST results are available for this feature:
BLAST of FC878202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878202 ID=FC878202; Name=FC878202; organism=Citrus clementina; type=EST; length=944bpback to top |