FC878202
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: CH60_BEUC1 (60 kDa chaperonin OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=groL PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.588e-11 Identity = 39/117 (33.33%), Postives = 62/117 (52.99%), Query Frame = 2 Query: 242 VADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHP----AAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIE 580 +AD V+ TLGP+G + ++ G TI+NDG +I K +++ P A+++ ++AK D GDGTTT +LA +RE + G +P L + A + E AK +E Sbjct: 22 LADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEEPFEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPIALKKGIDKAVEAVTAALLEQAKEVE 138
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: CH60_BDEBA (60 kDa chaperonin OS=Bdellovibrio bacteriovorus GN=groL PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.588e-11 Identity = 37/139 (26.62%), Postives = 74/139 (53.24%), Query Frame = 2 Query: 185 TDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHP----AAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQS 589 T + + ++ +N +A+ V+ TLGP+G + +I G+ I+ DG T+ K +++ + A+++ ++A + E GDGTTT +LA RE + G +P ++ R A I+++K ++K ++G + Sbjct: 6 TFSEDARTHILKGVNT---LANAVKVTLGPKGRNVVIDKSFGSPLITKDGVTVAKEIELENKFENMGAQMVKEVASKTNDEAGDGTTTATVLAQAIYREGAKLVSAGHNPMSIKRGIDKAVGIIIEELKSMSKPVKGSN 141
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: CH60_ACHLI (60 kDa chaperonin OS=Acholeplasma laidlawii (strain PG-8A) GN=groL PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.588e-11 Identity = 44/157 (28.03%), Postives = 81/157 (51.59%), Query Frame = 2 Query: 200 GKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHP----AAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHP----QNLIRSFRNASYKAIQKIK--ELAKSIEG-QSLEEKKRLLSKCAATTL 637 GK S + +A+ V+ TLGP+G + ++ G+ I+NDG +I K +++ P AK+L ++A + GDGTTT LLA + + +++G +P + ++R+ + S K ++K + E ++ IE S+ R + K A + Sbjct: 8 GKDAKQSLLKGVDLLANTVKITLGPKGRNVVLDKGYGSPLITNDGVSIAKEIELKDPYENMGAKLLYEVASKTNDVAGDGTTTATLLAQSIIHKGFKAVDNGANPVLVREGILRAGKEVSQKLLEKSRPVETSEDIENVASISASSREIGKIIAEAM 164
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: CH604_BURXL (60 kDa chaperonin 4 OS=Burkholderia xenovorans (strain LB400) GN=groL4 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.588e-11 Identity = 37/136 (27.21%), Postives = 77/136 (56.62%), Query Frame = 2 Query: 176 KEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLD----IVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAK 571 KE + +++LV +N +A+ V+ TLGP+G + ++ G+ ++ DG ++ K ++ + + A+++ ++A GDGTTT +LA +RE + ++ G++P +L R A AI+++K+++K Sbjct: 4 KEIIFSDVARSRLVEGVNI---LANAVKVTLGPKGRNVVLERSFGSPVVTKDGVSVAKEIELSDRVQNIGAQLVKEVASRTSDAAGDGTTTATVLAQAIVREGQKYVAAGLNPLDLKRGIDKAVIAAIEELKKISK 136
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: CH602_MYXXD (60 kDa chaperonin 2 OS=Myxococcus xanthus (strain DK 1622) GN=groL2 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.588e-11 Identity = 52/205 (25.37%), Postives = 99/205 (48.29%), Query Frame = 2 Query: 242 VADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHP----AAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPG-GTMRDSFLVNGVAFKKTFSYAGFEQQPKK 841 +AD V+ TLGP+G + +I G+ TI+ DG T+ K +++ + A+++ ++A GDGTTT +LA RE + G +P ++ R A + ++K+LAK ++KK + + + IG +++ DA+ +G + +I +++ G T D +V G+ F + + F P++ Sbjct: 22 LADAVKVTLGPKGRNVVIEKSFGSPTITKDGVTVAKEIELENKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQAIFREGAKLVAAGHNPMDIKRGIDKAVGAIVAELKKLAK-----PTKDKKEIAQVGTISANGDETIG-------TIIADAMEKVG---KEGVITVEEAKGLETTLD--VVEGMQFDRGYLSPYFVTDPER 209
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: CH602_BURPS (60 kDa chaperonin 2 OS=Burkholderia pseudomallei GN=groL2 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.588e-11 Identity = 35/127 (27.56%), Postives = 72/127 (56.69%), Query Frame = 2 Query: 203 KAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPA----AKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAK 571 +A+LV +N +A+ V+ TLGP+G + ++ G+ ++ DG ++ K +++ A+++ ++A GDGTTT +LA +RE + ++ G++P +L R A A+ ++K+++K Sbjct: 13 RAKLVEGVNL---LANAVKVTLGPKGRNVVLERSFGSPVVTKDGVSVAKEIELADKVQNIGAQLVKEVASKTSDAAGDGTTTATVLAQAIVREGQKYVAAGLNPLDLKRGIDKAVAAAVDELKKISK 136
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: CH602_BURP6 (60 kDa chaperonin 2 OS=Burkholderia pseudomallei (strain 668) GN=groL2 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.588e-11 Identity = 35/127 (27.56%), Postives = 72/127 (56.69%), Query Frame = 2 Query: 203 KAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPA----AKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAK 571 +A+LV +N +A+ V+ TLGP+G + ++ G+ ++ DG ++ K +++ A+++ ++A GDGTTT +LA +RE + ++ G++P +L R A A+ ++K+++K Sbjct: 13 RAKLVEGVNL---LANAVKVTLGPKGRNVVLERSFGSPVVTKDGVSVAKEIELADKVQNIGAQLVKEVASKTSDAAGDGTTTATVLAQAIVREGQKYVAAGLNPLDLKRGIDKAVAAAVDELKKISK 136
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: CH602_BURP1 (60 kDa chaperonin 2 OS=Burkholderia pseudomallei (strain 1710b) GN=groL2 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.588e-11 Identity = 35/127 (27.56%), Postives = 72/127 (56.69%), Query Frame = 2 Query: 203 KAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPA----AKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAK 571 +A+LV +N +A+ V+ TLGP+G + ++ G+ ++ DG ++ K +++ A+++ ++A GDGTTT +LA +RE + ++ G++P +L R A A+ ++K+++K Sbjct: 13 RAKLVEGVNL---LANAVKVTLGPKGRNVVLERSFGSPVVTKDGVSVAKEIELADKVQNIGAQLVKEVASKTSDAAGDGTTTATVLAQAIVREGQKYVAAGLNPLDLKRGIDKAVAAAVDELKKISK 136
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: CH602_BURP0 (60 kDa chaperonin 2 OS=Burkholderia pseudomallei (strain 1106a) GN=groL2 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.588e-11 Identity = 35/127 (27.56%), Postives = 72/127 (56.69%), Query Frame = 2 Query: 203 KAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPA----AKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAK 571 +A+LV +N +A+ V+ TLGP+G + ++ G+ ++ DG ++ K +++ A+++ ++A GDGTTT +LA +RE + ++ G++P +L R A A+ ++K+++K Sbjct: 13 RAKLVEGVNL---LANAVKVTLGPKGRNVVLERSFGSPVVTKDGVSVAKEIELADKVQNIGAQLVKEVASKTSDAAGDGTTTATVLAQAIVREGQKYVAAGLNPLDLKRGIDKAVAAAVDELKKISK 136
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: CH60_SYNWW (60 kDa chaperonin OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=groL PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.686e-11 Identity = 44/160 (27.50%), Postives = 80/160 (50.00%), Query Frame = 2 Query: 242 VADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHP----AAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIG 709 +A+ V+ TLGP+G + ++ G+ TI+NDG TI + +D+ P +++ ++A + GDGTTT LLA ++E + G +P + R A + +IK L+K +E + +++ AA + IG ++ DA+ +G Sbjct: 23 LANAVKVTLGPKGRNVVLDRKFGSPTITNDGVTIARDIDLKDPWENLGCQLVKEVAIKTNDVAGDGTTTATLLAQAMIKEGLKNVAAGANPMIMRRGIDQAVKAVVDEIKTLSKPVESRD------SIAQVAAISADDPEIG-------QLIADAMEKVG 169 The following BLAST results are available for this feature:
BLAST of FC878202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878202 ID=FC878202; Name=FC878202; organism=Citrus clementina; type=EST; length=944bpback to top |