FC878202
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPA_SCHPO (T-complex protein 1 subunit alpha OS=Schizosaccharomyces pombe GN=cct1 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.873e-38 Identity = 85/205 (41.46%), Postives = 134/205 (65.37%), Query Frame = 2 Query: 221 NINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKE-LAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGDR-------LNMIGIKKVPGGTMRDSFLVNGVAFKKTFS 811 N+ A TA+A+VV+S+LGP G+DK++ DD G VT++NDGATI+ LLD+ HPA K+LV++A+ QD EVGDGTT+VV++AAE LR A +++ +HP +I +R A +A++ + + L+ S++ K L A T++SSK+IG + +FF++M VDA+ ++ + + + I K G + R+S LV G A T + Sbjct: 26 NVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFMTDVLSCSVDSLG----KESLINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSNSKGETRYPVKAVNILKAHGKSSRESVLVKGYALNCTIA 226
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPA_MACFA (T-complex protein 1 subunit alpha OS=Macaca fascicularis GN=TCP1 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 7.670e-38 Identity = 93/225 (41.33%), Postives = 140/225 (62.22%), Query Frame = 2 Query: 188 DTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGDR-------LNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 841 D S G+A N+ A ++A++V+S+LGP G+DK++ DD G VTI+NDGATI+KLL++ HPAAK+L ++A QD EVGDGTT+VV++AAE L+ A + +HP ++I +R A +A++ I E ++ + E + L A T++SSK+IG +FFA+MVVDAV AI D +N + I K G + +S L++G A G + PK+ Sbjct: 10 DRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELGKQKIHPTSVISGYRLACKEAVRYINE---NLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDTRGQPRYPVNSVNILKAHGRSQMESKLISGYALN---CVVGSQGMPKR 228
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: THSB_THEAC (Thermosome subunit beta OS=Thermoplasma acidophilum GN=thsB PE=1 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 2.232e-37 Identity = 90/225 (40.00%), Postives = 136/225 (60.44%), Query Frame = 2 Query: 164 IILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIG---DGD---RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAG 820 I +LKEGT GK + NI A A+++ VRS+LGPRGMDK++ D G + I+NDG TI+K +D+ HPAAK++V+++K+QDS VGDGTTT V++A L++A+ I VHP + +R AS +A + I E++ I ++K LL K A T+L+SK K+ A + +AV ++ DG + I + K GG + D+ L+NG+ K + G Sbjct: 7 IFILKEGTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGA----DEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPG 227
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPE_YEAST (T-complex protein 1 subunit epsilon OS=Saccharomyces cerevisiae GN=CCT5 PE=1 SV=3) HSP 1 Score: 155.221 bits (391), Expect = 4.972e-37 Identity = 92/245 (37.55%), Postives = 145/245 (59.18%), Query Frame = 2 Query: 119 ISISISTMAAMMQPQIILLKEGTDTSQ-GKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGDR----LNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPK 838 +S +I M +P II+ +G Q G S+I A +VA +++++LGPRG+DK++ G +TI+NDGATI+ +++ + AK+LV ++KSQD E+GDGTT VV+LA+ L +A I+ G+HP + F A+ AI K++E I + E + L + A T+L SK++ + + FA M V+AV + D DR ++I ++ GG++ DS L+NGV K FS+ Q PK Sbjct: 15 LSNAIVAQDEMGRPFIIVKDQGNKKRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEIAKLLVQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDSKLINGVILDKDFSH---PQMPK 256
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPA_YEAST (T-complex protein 1 subunit alpha OS=Saccharomyces cerevisiae GN=TCP1 PE=1 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 6.493e-37 Identity = 86/203 (42.36%), Postives = 131/203 (64.53%), Query Frame = 2 Query: 221 NINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKE-LAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGDR-------LNMIGIKKVPGGTMRDSFLVNGVAFKKT 805 N+ A AVA+VV+S+LGP G+DK++ DD G T++NDGATI+ LLD+ HPA KILV++A+ QD E+GDGTT+VV++A+E L+ A +++ +HP +I FR A +AI+ I E L+ S++ K L A T++SSK+IG + +FF++MVVDA+ A+ + + + + K G + +S LV G A T Sbjct: 29 NVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAGKILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLG----KETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNCT 227
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPA_CAEEL (T-complex protein 1 subunit alpha OS=Caenorhabditis elegans GN=cct-1 PE=2 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 6.493e-37 Identity = 87/219 (39.73%), Postives = 135/219 (61.64%), Query Frame = 2 Query: 167 ILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGDR------LNMIGIKKVPGGTMRDSFLVNGVAFKKT 805 IL G T+ G+ N+ A A+A++V+S+LGP G+DK++ DD G V ++NDGATI+K L++ HPA K+LV++A+ QD EVGDGTT+VV++AAE L+ A ++ VHP +I +R A +A++ I E +I S ++ + A T++SSK+IG + +FF +VVDA A+ + +N + + K G + R+S LV G A T Sbjct: 8 ILALTGKRTT-GQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISE---NISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVENNGKVTYPINAVNVLKAHGKSARESVLVKGYALNCT 222
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPB_CAEEL (T-complex protein 1 subunit beta OS=Caenorhabditis elegans GN=cct-2 PE=2 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 8.481e-37 Identity = 87/216 (40.28%), Postives = 135/216 (62.50%), Query Frame = 2 Query: 170 LLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLI----HDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIE-GQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKK 802 +LK+ +G++ +S+ A+ D+V+STLGP+GMDK++ + G + ++NDGATI+K + + +PAAK+LVD++ +QD EVGDGTT+V +LAAE L+EA+ + +HPQ +I +R A A + +K+ SIE G ++ + L K A TTL SK++ KE FA + VDAV + L+ I I K GG+M +S+L G +K Sbjct: 6 ILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLKK--SSIESGDNIRDD---LLKIARTTLGSKILSQHKEHFAQLAVDAVLRLKGSGNLDAIQIIKKLGGSMNESYLDEGFLLEK 216
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: THSA_THEK1 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.108e-36 Identity = 92/274 (33.58%), Postives = 148/274 (54.01%), Query Frame = 2 Query: 140 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIG---DGD---RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFXXXXXXXXXXXXXXXXXXXXAEIRLSDPSQYQS 943 MA + +++L EGT G+ NI A +A+ VR+TLGP+GMDK++ D G + ++NDGATI+ +D+ HPAAK++V++AK+QD E GDGTTT V++A E LR+A+ ++ +HP +I+ + A+ KA + + E+A ++ + + L K AAT+++ K KE A + V+AV + DG L+ I +K G + +S LV GV K + + PK+ A+I ++ P Q S Sbjct: 1 MAQLSGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAIRVD----PDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVH---PRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMS 267
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: THSA_PYRKO (Thermosome subunit alpha OS=Pyrococcus kodakaraensis GN=thsA PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.108e-36 Identity = 92/274 (33.58%), Postives = 148/274 (54.01%), Query Frame = 2 Query: 140 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIG---DGD---RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFXXXXXXXXXXXXXXXXXXXXAEIRLSDPSQYQS 943 MA + +++L EGT G+ NI A +A+ VR+TLGP+GMDK++ D G + ++NDGATI+ +D+ HPAAK++V++AK+QD E GDGTTT V++A E LR+A+ ++ +HP +I+ + A+ KA + + E+A ++ + + L K AAT+++ K KE A + V+AV + DG L+ I +K G + +S LV GV K + + PK+ A+I ++ P Q S Sbjct: 1 MAQLSGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAIRVD----PDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVH---PRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMS 267
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: THSA_THEK8 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.467e-36 Identity = 91/274 (33.21%), Postives = 147/274 (53.65%), Query Frame = 2 Query: 140 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIG---DGD---RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFXXXXXXXXXXXXXXXXXXXXAEIRLSDPSQYQS 943 MA + +++L EGT G+ NI A +A+ VR+TLGP+GMDK++ D G + ++NDGATI+ +D+ HPAAK++V++AK+QD E GDGTTT V++A E LR+A+ ++ +HP +I+ + A+ KA + ++E+A + + + L + A T+++ K KE A + VDAV + DG L+ I +K G + +S LV GV K + + PK+ A+I ++ P Q S Sbjct: 1 MAQLSGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILEEIAIKVN----PDDEETLLRIAMTSITGKNAESHKELLAKLAVDAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVH---PRMPKRVEGAKIALINEALEVKKTETDAKINITSPDQLMS 267 The following BLAST results are available for this feature:
BLAST of FC878202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878202 ID=FC878202; Name=FC878202; organism=Citrus clementina; type=EST; length=944bpback to top |