FC878202
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPB_MACFA (T-complex protein 1 subunit beta OS=Macaca fascicularis GN=CCT2 PE=2 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 1.225e-35 Identity = 90/237 (37.97%), Postives = 139/237 (58.65%), Query Frame = 2 Query: 140 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDD--KGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRL-LSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 841 MA++ + + K G D + + +++ A+ D+V+STLGP+GMDK++ ++ ++NDGATI+K + + +PAAK+LVD+++ QD EVGDGTT+V +LAAE LREA+ I +HPQ +I +R A+ A + + L+ +++ S E K R L A TTLSSKL+ K+ F + V+AV + L I I K GG++ DS+L G K QPK+ Sbjct: 1 MASLSLAPVNIFKAGADEERAETARLTSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAAREAL--LSSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHIIKKLGGSLADSYLDEGFLLDKKIGV----NQPKR 231
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPB_HUMAN (T-complex protein 1 subunit beta OS=Homo sapiens GN=CCT2 PE=1 SV=4) HSP 1 Score: 150.599 bits (379), Expect = 1.225e-35 Identity = 90/237 (37.97%), Postives = 139/237 (58.65%), Query Frame = 2 Query: 140 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDD--KGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRL-LSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 841 MA++ + + K G D + + +++ A+ D+V+STLGP+GMDK++ ++ ++NDGATI+K + + +PAAK+LVD+++ QD EVGDGTT+V +LAAE LREA+ I +HPQ +I +R A+ A + + L+ +++ S E K R L A TTLSSKL+ K+ F + V+AV + L I I K GG++ DS+L G K QPK+ Sbjct: 1 MASLSLAPVNIFKAGADEERAETARLTSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAAREAL--LSSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHIIKKLGGSLADSYLDEGFLLDKKIGV----NQPKR 231
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPE_CAEEL (T-complex protein 1 subunit epsilon OS=Caenorhabditis elegans GN=cct-5 PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 2.089e-35 Identity = 89/234 (38.03%), Postives = 140/234 (59.83%), Query Frame = 2 Query: 155 QPQIILLK-EGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGD----RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 841 QP I++ + E G + S+I A AVA+ +R++LGPRG+DK++ G VTI+NDGATIM+ +D+ H AK++V+++KSQD E+GDGTT VV+LA L EA+ I+ G+HP + F A KA++ + ++ +E ++RL+ + A T+L SK++ FA + VDAV ++ D + MI ++ GG + D+ LV G+ KT S+ Q PK+ Sbjct: 15 QPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKF---PVENRERLV-ETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKMEGKVGGRLEDTILVKGIVIDKTMSH---PQMPKE 241
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPA_SCHMA (T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.728e-35 Identity = 96/266 (36.09%), Postives = 146/266 (54.89%), Query Frame = 2 Query: 170 LLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKE-LAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAI-------GDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFXXXXXXXXXXXXXXXXXXXXAEIRLSDPSQYQS 943 +L G + + G++ N+ A + A+ V+++LGP G+DK++ DD G VTI+NDGATI+KLLD+ HPAAKILV +A+ QD EVGDGTT+VV+LAA L+ A I VHP +I +R A +A + I+E +A + + K L A T +SSKLI + + F+ M VDA+ A+ G + + I K G +M +S L++G A T A +Q P+ ++ + DP+Q ++ Sbjct: 1 MLTLGGERTSGESVRKQNVLAACSFANFVKTSLGPVGLDKMLVDDVGDVTITNDGATILKLLDVEHPAAKILVQLAQLQDEEVGDGTTSVVILAAALLKNADELISRFVHPTTVINGYRLACREACKYIQEHMAYDVN----KLGKAGLINVARTAMSSKLINLDADMFSQMAVDALMAVEVSGGPKGPVYPIKAVNILKAHGRSMSESMLIDGYALNCT---AASQQMPRIIKKAKIAFLDFSLQKVKMKLGVQVVVKDPAQLEA 259
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPD_RAT (T-complex protein 1 subunit delta OS=Rattus norvegicus GN=Cct4 PE=1 SV=3) HSP 1 Score: 149.058 bits (375), Expect = 3.563e-35 Identity = 82/212 (38.68%), Postives = 133/212 (62.74%), Query Frame = 2 Query: 218 SNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGD-----GDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPK 838 SNI+A AVAD +R++LGP+GMDK+I D KG VTI+NDGATI+K + ++HPAA++LV+++K+QD E GDGTT+VV++A L ++ G+HP + SF+ A K ++ + ++++ ++ L +++ LL+ A T+L+SK++ + M V+AV + D L I I K GGT+ D LV G+ + + +G + K Sbjct: 36 SNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTDMSRPVQ---LSDRETLLNS-ATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVANSGITRVEK 243
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPD_MOUSE (T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3) HSP 1 Score: 149.058 bits (375), Expect = 3.563e-35 Identity = 82/212 (38.68%), Postives = 133/212 (62.74%), Query Frame = 2 Query: 218 SNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGD-----GDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPK 838 SNI+A AVAD +R++LGP+GMDK+I D KG VTI+NDGATI+K + ++HPAA++LV+++K+QD E GDGTT+VV++A L ++ G+HP + SF+ A K ++ + ++++ ++ L +++ LL+ A T+L+SK++ + M V+AV + D L I I K GGT+ D LV G+ + + +G + K Sbjct: 36 SNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTDMSRPVQ---LSDRETLLNS-ATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVANSGITRVEK 243
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPB_RAT (T-complex protein 1 subunit beta OS=Rattus norvegicus GN=Cct2 PE=1 SV=3) HSP 1 Score: 149.058 bits (375), Expect = 3.563e-35 Identity = 89/237 (37.55%), Postives = 139/237 (58.65%), Query Frame = 2 Query: 140 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDD--KGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEK-KRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 841 MA++ + + K G D + + +S+ A+ D+V+STLGP+GMDK++ ++ ++NDGATI+K + + +PAAK+LVD+++ QD EVGDGTT+V +LAAE LREA+ I +HPQ +I +R A+ A + + L+ +++ S E K + L A TTLSSKL+ K+ F + V+AV + L I + K GG++ DS+L G K QPK+ Sbjct: 1 MASLSLAPVNIFKAGADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAAREAL--LSSAVDHGSDEVKFWQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGV----NQPKR 231
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPD_KLULA (T-complex protein 1 subunit delta OS=Kluyveromyces lactis GN=CCT4 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 4.653e-35 Identity = 80/195 (41.03%), Postives = 127/195 (65.13%), Query Frame = 2 Query: 218 SNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGDR----LNMIGIKKVPGGTMRDSFLVNGV 790 +NI A AVAD +R++LGP+GMDK+I +G + ISNDG TI+K + I+HP AK+LV+++ +QD E GDGTT+VV++ L A+ + G+HP + SF+ A+ ++++ + ++ I SL++K+ L+ + A+T+LSSK++ F A + VD V +I D LN I + K GGT+ D+ +VNGV Sbjct: 25 ANIIAARAVADAIRTSLGPKGMDKMIKTSRGDIIISNDGHTILKQMAILHPVAKMLVEVSGAQDVEAGDGTTSVVIMTGALLGAAEKLLNKGIHPTIIAESFQRAAERSVEILLNMSTKI---SLDDKEALV-RAASTSLSSKIVSQHSSFLAPLAVDCVLSIASHDSTNVDLNDIRLIKKVGGTIDDTEMVNGV 215
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPD_CAEEL (T-complex protein 1 subunit delta OS=Caenorhabditis elegans GN=cct-4 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 7.938e-35 Identity = 82/195 (42.05%), Postives = 122/195 (62.56%), Query Frame = 2 Query: 218 SNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGD-----RLNMIGIKKVPGGTMRDSFLVNG 787 SNI A AVAD VR++LGPRGMDK+I G VTI+NDGATI+ + ++HP AK+LV+++K+QD E GDGTTTVV++A L A+ + G+HP + SF++A+ +A + + E++ ++ LL+K A T+L+SK++ A M V+AV I + + L MI I K G T+ +S L+ G Sbjct: 35 SNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVD----LSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKIINSENDSNVNLKMIKIIKKMGDTVEESELIEG 225
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPB_MOUSE (T-complex protein 1 subunit beta OS=Mus musculus GN=Cct2 PE=1 SV=4) HSP 1 Score: 147.902 bits (372), Expect = 7.938e-35 Identity = 88/237 (37.13%), Postives = 138/237 (58.23%), Query Frame = 2 Query: 140 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDD--KGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEK-KRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 841 MA++ + + K G D + + +S+ A+ D+V+STLGP+GMDK++ + ++NDGATI+K + + +PAAK+LVD+++ QD EVGDGTT+V +LAAE LREA+ I +HPQ +I +R A+ A + + L+ +++ S E + + L A TTLSSKL+ K+ F + V+AV + L I + K GG++ DS+L G K QPK+ Sbjct: 1 MASLSLAPVNIFKAGADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDAALMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIISGWREATKAAREAL--LSSAVDHGSDEARFWQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGV----NQPKR 231 The following BLAST results are available for this feature:
BLAST of FC878202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878202 ID=FC878202; Name=FC878202; organism=Citrus clementina; type=EST; length=944bpback to top |