FC878202
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPD_YEAST (T-complex protein 1 subunit delta OS=Saccharomyces cerevisiae GN=CCT4 PE=1 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 1.037e-34 Identity = 78/200 (39.00%), Postives = 131/200 (65.50%), Query Frame = 2 Query: 218 SNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGDR----LNMIGIKKVPGGTMRDSFLVNGVAFKKT 805 +NI A +VAD +R++LGP+GMDK+I +G + ISNDG TI+K + I+HP A++LV+++ +QDSE GDGTT+VV+L L A+ + G+HP + SF++A+ +++ + E+ + SL ++++L+ + A+T+LSSK++ F A + VD+V I D + LN I + K GGT+ D+ +++GV +T Sbjct: 23 ANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKV---SLSDREQLV-RAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDTEMIDGVVLTQT 218
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPD_TAKRU (T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.037e-34 Identity = 83/196 (42.35%), Postives = 127/196 (64.80%), Query Frame = 2 Query: 218 SNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGD-----GDRLNMIGIKKVPGGTMRDSFLVNGV 790 SNI+A AVAD VR++LGP+GMDK+I D+KG VTI+NDGATI+K + ++HP+AK+LV+++K+QD E GDGTT+VV++A L ++ G+HP + SF+ A K ++ + +++ ++ L +++ LL+ A T+L SK++ A M VDAV + D L+ I I K GGT+ D LV G+ Sbjct: 33 SNISAAKAVADAVRTSLGPKGMDKMIQDEKGDVTITNDGATILKQMQVLHPSAKMLVELSKAQDIEAGDGTTSVVVIAGALLDSCNRLLQRGIHPTIISESFQKAVDKGVEVLTAMSQPVQ---LGDRETLLNS-ATTSLCSKVVSQYSSLLAPMSVDAVMRVIDPATATSVDLHDIKIIKKLGGTIDDCELVEGL 224
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: THS2_HALVO (Thermosome subunit 2 OS=Halobacterium volcanii GN=cct2 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.768e-34 Identity = 86/223 (38.57%), Postives = 131/223 (58.74%), Query Frame = 2 Query: 155 QPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAI----GDGDR---LNMIGIKKVPGGTMRDSFLVNGVAFKK 802 QP II+ ++ AQ NI A AVA+ VRSTLGP+GMDK++ D G VTI+NDG TI+K +DI +P A+++V++A++Q+ E GDGTTT V +A E L+ A+ +E +HP +IR F AS KA ++I ++A+ ++ + + LL K A T+++ K KE A ++V AV + DG L + I+ G + +S L+ G K Sbjct: 9 QPMIIMGEDAQRVKDRDAQEY-NIRAARAVAEAVRSTLGPKGMDKMLVDSMGDVTITNDGVTILKEMDIDNPTAEMIVEVAETQEDEAGDGTTTAVAIAGELLKNAEDLLEQDIHPTAIIRGFNLASEKAREEIDDIAERVD----PDDEELLKKVAETSMTGKSSELNKELLADLIVRAVRQVTVEANDGSHVVDLENVSIETQTGRSASESELLTGAVIDK 226
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPB_YEAST (T-complex protein 1 subunit beta OS=Saccharomyces cerevisiae GN=CCT2 PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.309e-34 Identity = 89/221 (40.27%), Postives = 131/221 (59.28%), Query Frame = 2 Query: 185 TDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHD-DKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDG-VHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 841 T+ A+L + + A AV D+V+STLGP+GMDKL+ T ++NDGATI+K + + +PAAK+LV+I+K QD EVGDGTT+V +L+AE LREA+ I+ +HPQ +I +R AS A+ + + A ++ L+ A TTLSSK++ +K+ FA + +A+ + L I I K+ GG + DSFL G K F QPK+ Sbjct: 11 TEERAENARLSAFVGAI-AVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLI-HIAKTTLSSKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDSFLDEGFILAKKFG----NNQPKR 225
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPD_SCHPO (T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe GN=cct4 PE=2 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 3.939e-34 Identity = 85/202 (42.08%), Postives = 128/202 (63.37%), Query Frame = 2 Query: 215 VSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGD-----GDRLNMIGIKKVPGGTMRDSFLVNGVAFKKT 805 +SNI A +VAD +R++LGP+GMDK+I KG V ++NDGATI+K L ++HPAAK+LVD++ +QD E GDGTT+VV+LA L A+ ++ G+HP + SF+ A+ + +KE A +IE L +++ LL + A T+L+SK++ A + VDAV + D L I I K GG + D+ L+ G+A +T Sbjct: 22 LSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHPAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDCMKENALAIE---LSDRESLL-RAATTSLNSKIVSQYSNLLAPIAVDAVLKVIDPRVATNVDLKDIRIVKKLGGIIDDTELIPGLALTQT 219
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPD_ASHGO (T-complex protein 1 subunit delta OS=Ashbya gossypii GN=CCT4 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.939e-34 Identity = 85/217 (39.17%), Postives = 134/217 (61.75%), Query Frame = 2 Query: 158 PQIILLKEGTDTSQGKAQLV--SNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAI----GDGDRLNMIGIKKVPGGTMRDSFLVNGV 790 P + T ++ K Q V +NI A AVAD +R++LGP+GMDK+I +G + ISNDG TI+K + I+HP AK+LV+++ +QDSE GDGTT+VV+L L A+ + G+HP + SF+ A +A++ + ++K I SL+++ L+ + A+T+LSSK++ F A + VD V ++ LN I + K GGT+ D+ +V+GV Sbjct: 2 PPKVSASNATFKNREKPQEVRKANIIAARAVADAIRTSLGPKGMDKMIKTARGEILISNDGHTILKQMAILHPVAKMLVEVSAAQDSEAGDGTTSVVILTGALLGAAEKLLAKGIHPTIIAESFQRAGQRAVEVLLGMSKRI---SLQDRAELV-RAASTSLSSKIVSQYSTFLAPLAVDCVLSLTNEASTNVDLNDIRLVKKVGGTIDDTEMVDGV 214
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPA_ENCCU (T-complex protein 1 subunit alpha OS=Encephalitozoon cuniculi GN=TCP1 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.939e-34 Identity = 87/227 (38.33%), Postives = 131/227 (57.71%), Query Frame = 2 Query: 182 GTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIG--DGDRLNM-----IGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 841 G ++ G + + N A V + ++++ GP G+DK+ D G V+I+NDGATI++ + I PAAKILVD+A QD EVGDGTT+VVL+A + + I GVHP ++ ++ A + +Q IK KS+ +L + L T++SSK+I E E F +V+DA+ I D +R NM I I K PGG+M++SFL G A + + ++Q KK Sbjct: 13 GGESYSGISAVEKNAKAMMKVYNAIKTSFGPLGLDKMCVDSAGEVSITNDGATILQNMLIDDPAAKILVDLATQQDHEVGDGTTSVVLIAVSLIEKGAKLIASGVHPSVVVSGYKMAFNECVQFIK---KSMSKSTLNLGSKALRNVVETSISSKVISSESEVFCGIVIDALKCIESVDENRKNMYPIEDINILKHPGGSMKESFLHQGYALNCSLASNFMKRQVKK 236
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPE_MACFA (T-complex protein 1 subunit epsilon OS=Macaca fascicularis GN=CCT5 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 8.776e-34 Identity = 81/218 (37.16%), Postives = 131/218 (60.09%), Query Frame = 2 Query: 200 GKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGDR----LNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 841 G L S+I A AVA+ +R++LGP G+DK++ D G VT++NDGATI+ ++D+ H AK++V+++KSQD E+GDGTT VV+LA L EA+ ++ G+HP + + A+ AI+ + +++ S+ + + L + A TTL SK++ A + V+AV + D +R +I ++ GG + D+ L+ GV K FS+ Q PKK Sbjct: 30 GLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEP--LIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSH---PQMPKK 242
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPE_HUMAN (T-complex protein 1 subunit epsilon OS=Homo sapiens GN=CCT5 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 8.776e-34 Identity = 81/218 (37.16%), Postives = 131/218 (60.09%), Query Frame = 2 Query: 200 GKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGDR----LNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 841 G L S+I A AVA+ +R++LGP G+DK++ D G VT++NDGATI+ ++D+ H AK++V+++KSQD E+GDGTT VV+LA L EA+ ++ G+HP + + A+ AI+ + +++ S+ + + L + A TTL SK++ A + V+AV + D +R +I ++ GG + D+ L+ GV K FS+ Q PKK Sbjct: 30 GLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEP--LIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSH---PQMPKK 242
BLAST of FC878202 vs. ExPASy Swiss-Prot
Match: TCPG_OXYGR (T-complex protein 1 subunit gamma OS=Oxytricha granulifera PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.497e-33 Identity = 73/233 (31.33%), Postives = 139/233 (59.66%), Query Frame = 2 Query: 164 IILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKIKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVD-AVGAI-----GDGDRLNM-----IGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQ 829 + +L + QG+ +NI A AV+D+VR+TLGP+ M K++ D G + ++NDG I++ +D+ HPAAK ++++A++QD EVGDGTT+V++LA E L + F+E +HP ++ ++ A + ++ + + I+ ++ + ++++S C T SSK + +++VD AV A+ +GD + + ++K+PGG + +S +++GV F K ++ G + Sbjct: 7 VFILNQNAKREQGRKAQTANIKAARAVSDIVRTTLGPKSMLKMLLDPMGGIVLTNDGNAILREIDVAHPAAKSMIELARAQDEEVGDGTTSVIILAGEILSAVESFLERDIHPTVIVGAYFQALEEIVRLTESYGEPIDIENENDLQKIVSSCIGTKFSSK--------WGNLIVDLAVKAVKSVYKKEGDYVEIDVKRYAKVEKIPGGLLEESVVLDGVMFNKDVTHPGMRR 231 The following BLAST results are available for this feature:
BLAST of FC878202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878202 ID=FC878202; Name=FC878202; organism=Citrus clementina; type=EST; length=944bpback to top |