FC878236
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: ANGE2_MOUSE (Protein angel homolog 2 OS=Mus musculus GN=Angel2 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 1.737e-18 Identity = 40/107 (37.38%), Postives = 59/107 (55.14%), Query Frame = 1 Query: 343 FSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEV--DRY-FDILNVMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEF 654 FSV+SYNIL + LY++ R + W+ R I +E+ + D++C+QEV D Y +I +E GY YK +TG DGCA+ +K +F LL +EF Sbjct: 167 FSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGTEIRPSLESLGYHCEYKMKTGRKPDGCAICFKHSRFSLLSVNPVEF 273 HSP 2 Score: 46.9802 bits (110), Expect = 1.737e-18 Identity = 24/61 (39.34%), Postives = 36/61 (59.02%), Query Frame = 2 Query: 722 SRRVLVGNIHVLYNPNRGEVKLGQICFLSSR-AQIVAEKWG-NIPVVLAGDFNITLQSAIY 898 S + + N H+LYNP RG++KL Q+ L + A + K G + P+V+ GDFN S +Y Sbjct: 301 SPSICIANTHLLYNPRRGDIKLTQLAMLLAEIANVTHRKDGSSCPIVMCGDFNSVPGSPLY 361
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: ANGEL_DROME (Protein angel OS=Drosophila melanogaster GN=angel PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 2.393e-17 Identity = 59/172 (34.30%), Postives = 90/172 (52.33%), Query Frame = 1 Query: 274 EPSPDVLRHWIDA-------DPNPISSQERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILNVM---------EKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGL----RENVAQLSAFEADAQHKIKK 729 E S D R W DP+ SS F VVSYNIL +H LY + +E++ W RR++ + +EL+ L+PDI+C+QE+ FD L V+ +K Y YK++TG DGCA+ + + KF LL+ ++E + + R+NVA + F Q + +K Sbjct: 41 ESSHDRNRRWTSLGNQAEGRDPHKCSS---FKVVSYNILAQDLLLEHLFLYVGIPHEFLSWQRRQQNLLRELLKLDPDILCLQEMQ--FDHLPVLVQRLRMGNGKKLAYV--YKKKTGCRTDGCAIVYDSSKFELLDHQAVELYDQAVALLNRDNVALFARFRFKKQQEQQK 205
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: CCR4_YARLI (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Yarrowia lipolytica GN=CCR4 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.544e-16 Identity = 42/130 (32.31%), Postives = 67/130 (51.54%), Query Frame = 1 Query: 328 SSQERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVD--RYFDILNV-MEKTGYAGCY----------KRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLREN 678 +S + F+V+SYN L DK + ++ + W R + +E+IG + DI+C QEVD + D + + + GYAG Y K + VDGCA+F+K F L+E+ S++F L+ N Sbjct: 336 ASSDTFTVMSYNTLCDK--YTTVQMHGYTPLWALGWKHRSETLLKEVIGYDSDILCFQEVDGASFEDFWSPKLHQLGYAGLYHPKTRARTMSKEKDAKRVDGCAIFYKTKSFCLIEKLSLDFSSLALKNN 463 HSP 2 Score: 35.8094 bits (81), Expect = 5.544e-16 Identity = 23/83 (27.71%), Postives = 38/83 (45.78%), Query Frame = 2 Query: 716 TKSRRVLVGNIHVLYNPNRGEVKLGQICFLSSRAQIVAEKW-------------GN---------IPVVLAGDFNITLQSAIY 898 T ++++V N H+ ++P +VKL Q+ L + AE+ GN +P+V+ GDFN T S +Y Sbjct: 491 TTGQKIIVTNTHLHWDPAFNDVKLIQVALLLDEVEKFAERVAKDSNRVSARNQDGNNVKYESGKKLPLVICGDFNSTTDSGVY 573
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: CCR4_USTMA (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Ustilago maydis GN=CCR4 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.550e-16 Identity = 51/154 (33.12%), Postives = 82/154 (53.25%), Query Frame = 1 Query: 277 PSPDVLRHWIDADPN----------PISSQERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEV--DRYFD-ILNVMEKTGYAGCY-----KRRTGDN----VDGCAMFWKADKFRLLEQTSIEFKEFGLR 672 P P R WI DP+ ++QE F+V+SYNIL D+ A +Y + W+ RK I QE++ + DI C+QEV ++Y D L+ + + Y G + R D+ VDGCA+F+K++K++L+E+ +EF + L+ Sbjct: 272 PLPPPEREWIMIDPDLPDLDADKHANDATQESFNVLSYNILFDRYATAQ--MYGYTPSWALAWDYRKEFILQEVMSYSADICCLQEVGVEQYEDYFLHHLSQQDYEGVFYPKSRARTMRDDERRRVDGCAIFYKSNKYQLIEKQLVEFNQIALQ 423 HSP 2 Score: 31.9574 bits (71), Expect = 5.550e-16 Identity = 23/94 (24.47%), Postives = 40/94 (42.55%), Query Frame = 2 Query: 686 NFPLLRQMRNTKS-RRVLVGNIHVLYNPNRGEVKLGQICFLSSRAQ-------------IVAEKW---------GNIPVVLAGDFNITLQSAIY 898 N ++ + N S R++V N+H ++P +VKL Q+ L + VAE + IP ++ GDFN ++ +Y Sbjct: 442 NIAVIALLENKLSGSRIVVANVHTHWDPAFRDVKLVQVAMLMDEVEKAGARFAKLPPKPSVAEGYPPPPKYTHANQIPTIICGDFNSVPETGVY 535
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: CCR4_PHANO (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Phaeosphaeria nodorum GN=CCR4 PE=3 SV=2) HSP 1 Score: 65.4698 bits (158), Expect = 2.063e-15 Identity = 43/132 (32.58%), Postives = 62/132 (46.97%), Query Frame = 1 Query: 295 RHWIDADPNPISSQERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDR------------YFDILNVMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEF 654 R WI D +QE + +SYNIL DK + + Y + W R+ LI EL N DI+C+QE+D+ ++D V A R VDGCA+F+K K+ LL++ I+F Sbjct: 205 RDWIVLDEITDPAQETVTALSYNILCDKYCTQSQ--YGYTPSSALAWETRRELILGELKQRNADIVCLQEIDQDSFNEYFREKLAHYDYKGVFWPKSRARTMAEREAKLVDGCAIFYKNSKYVLLDKQLIDF 334 HSP 2 Score: 38.1206 bits (87), Expect = 2.063e-15 Identity = 17/41 (41.46%), Postives = 22/41 (53.66%), Query Frame = 2 Query: 728 RVLVGNIHVLYNPNRGEVKLGQICFLSSRAQIVAEKWGNIP 850 R +VGN+HV +NP +VKL Q+ L A KW P Sbjct: 374 RFIVGNVHVFWNPAFTDVKLVQVAILMEGISKFATKWSKFP 414
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: NOCT_MOUSE (Nocturnin OS=Mus musculus GN=Ccrn4l PE=2 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 3.821e-15 Identity = 59/197 (29.95%), Postives = 93/197 (47.21%), Query Frame = 1 Query: 283 PDVLRHWIDADPNPISSQERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILN-VMEKTGYAG---------CYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLREN---VAQ-LSAFEADAQH-----KIKKSTGW*HTRSL*SKPRGSEIRSNLFSFLKG 816 P R ++D + SS V+ +NIL + +D + E +KW RK LI +E++ PDI+C+QEVD YFD ++ + GY G C + DGCA+F+ ++F+L+ T+I L+ N +AQ L E+ Q +K TGW RS +G ++ NL + +G Sbjct: 121 PRYQRDFVDLRTDCSSSHSPIRVMQWNILAQALG-EGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLISSTNIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLKARTGWERFRS----AQGCDLLQNLQNITQG 312
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: NOCT_RAT (Nocturnin (Fragment) OS=Rattus norvegicus GN=Ccrn4l PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.512e-15 Identity = 59/197 (29.95%), Postives = 93/197 (47.21%), Query Frame = 1 Query: 283 PDVLRHWIDADPNPISSQERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILN-VMEKTGYAG---------CYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLREN---VAQ-LSAFEADAQH-----KIKKSTGW*HTRSL*SKPRGSEIRSNLFSFLKG 816 P R ++D + SS V+ +NIL + +D + E +KW RK LI +E++ PDI+C+QEVD YFD L ++ + GY G C + DGCA+F+ +F+L+ T+I L+ N +AQ L E+ Q +K TGW RS +G ++ +L + +G Sbjct: 47 PRYQRDFVDLRTDCSSSHPPIRVMQWNILAQALG-EGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFDTLQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQSRFKLINSTNIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLKARTGWERFRS----AQGCDLLQSLQNITEG 238
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: PDE12_HUMAN (2',5'-phosphodiesterase 12 OS=Homo sapiens GN=PDE12 PE=1 SV=2) HSP 1 Score: 59.6918 bits (143), Expect = 1.675e-14 Identity = 45/129 (34.88%), Postives = 62/129 (48.06%), Query Frame = 1 Query: 352 VSYNILGDKNA---FKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYF---DILNVMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLRENVAQLSAFEADAQHK 720 VSYNIL D A F LY ++ + R+ LI +EL G N D+IC+QEVDR ++ +E G G ++ + +G A F++ KF LL Q I F E A E+D HK Sbjct: 298 VSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDRAVFSDSLVPALEAFGLEGVFRIK---QHEGLATFYRKSKFSLLSQHDISFYE-----------ALESDPLHK 412 HSP 2 Score: 40.817 bits (94), Expect = 1.675e-14 Identity = 20/66 (30.30%), Postives = 35/66 (53.03%), Query Frame = 2 Query: 704 QMRNTKSRRVLVGNIHVLYNPNRGEVKLGQICF-LSSRAQIVAEKWGNIPVVLAGDFNITLQSAIY 898 Q S+R+ V N H+ ++P G ++L Q+ L+ + + + IPV+ GDFN T + +Y Sbjct: 441 QSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVALAHIRHVSCDLYPGIPVIFCGDFNSTPSTGMY 506
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: CCR4_SCHPO (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Schizosaccharomyces pombe GN=ccr4 PE=2 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 2.818e-14 Identity = 46/127 (36.22%), Postives = 67/127 (52.76%), Query Frame = 1 Query: 316 PNPISSQERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVD-RYFDILNV--MEKTGYAGCY----KRRTGDN-----VDGCAMFWKADKFRLLEQTSIEFKE 660 P+ S +F+++SYN+L ++ A LY + W+ RK LI QEL G N DIIC+QEVD +D M GY G + + RT + VDGCA F+K K+ + E+ IE+ + Sbjct: 327 PSTTSKNLKFTIMSYNVLCERYATS--TLYGYTPSWALSWSYRKDLIMQELGGYNADIICLQEVDVENYDTFFAPQMSLKGYKGVHFPKSRVRTMNEVERRIVDGCATFFKTSKYVMHEKMVIEYNQ 451 HSP 2 Score: 34.6538 bits (78), Expect = 2.818e-14 Identity = 23/94 (24.47%), Postives = 41/94 (43.62%), Query Frame = 2 Query: 686 NFPLLRQMRNTKS-RRVLVGNIHVLYNPNRGEVKLGQICFLSSRAQIVAEKWGN----------------------IPVVLAGDFNITLQSAIY 898 N ++ + N ++ R++V N H+ ++P +VK+ Q+ L VA K+ N IP+++ GDFN S +Y Sbjct: 475 NISVITLLENKENGSRLIVANCHIHWDPQFRDVKVIQVAMLMDEIAQVATKFRNMPSKIPSDQLKDERPTYPEYLKIPILICGDFNSVQGSGVY 568
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: PDE12_RAT (2',5'-phosphodiesterase 12 OS=Rattus norvegicus GN=Pde12 PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 2.827e-14 Identity = 41/109 (37.61%), Postives = 58/109 (53.21%), Query Frame = 1 Query: 352 VSYNILGDKNA---FKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYF---DILNVMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKE 660 VSYNIL D A F LY ++ + R+ LI +EL G N D+IC+QEVDR ++ +E G G ++ + +G A F++ KFRLL Q I F+E Sbjct: 297 VSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDRAVFSDSLVPALEAFGLEGVFRIK---QHEGLATFYRKSKFRLLSQHDISFQE 402 HSP 2 Score: 38.5058 bits (88), Expect = 2.827e-14 Identity = 25/91 (27.47%), Postives = 44/91 (48.35%), Query Frame = 2 Query: 641 QALNLKSLAFVKMWHNFPLLR----QMRNTKSRRVLVGNIHVLYNPNRGEVKLGQICF-LSSRAQIVAEKWGNIPVVLAGDFNITLQSAIY 898 + L L LA K+ +L+ Q S+++ V N H+ ++P G ++L Q+ L + + + IPV+ GDFN T + +Y Sbjct: 415 EKLALNPLAQEKVLQRSSVLQISVLQSTTDSSKKICVANTHLYWHPKGGYIRLIQMAAALVHIRHVSCDLYPGIPVIFCGDFNSTPSTGMY 505 The following BLAST results are available for this feature:
BLAST of FC878236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878236 ID=FC878236; Name=FC878236; organism=Citrus clementina; type=EST; length=899bpback to top |