FC878332

Overview
NameFC878332
Unique NameFC878332
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length868
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878332 vs. ExPASy Swiss-Prot
Match: F16PA_MAGSA (Fructose-1,6-bisphosphatase class 1 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=fbp PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.363e-38
Identity = 85/179 (47.49%), Postives = 119/179 (66.48%), Query Frame = 2
Query:  329 MTITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVEPSKRGRYCVVFDPLDGSSNIDCGVSIGTIFGIYMMKD-SHEPTLDDVLQPGNNMLAAGYCMYGSSCTLVLSTGSGVHGFTLD 862
            +T+T F+L EQ +   S G F+ L++ I+  CK +   VN+  LA  +G+AG  NVQGEEQKKLDVL+ND+F+      G    + SEE E+   V  +  G+Y ++FDPLDGSSNID  +S+G+IF I  + + ++  + D  LQPG   +AAGY +YGSS  LVL+TG+GV+GFTLD
Sbjct:    6 ITLTHFLLQEQRRLGGS-GSFTALMTDIIFACKMISHEVNRGALAGNLGVAGSENVQGEEQKKLDVLANDIFLHMNALGGSYAGMASEELEDVHAVHGAADGKYLLLFDPLDGSSNIDVNISVGSIFSILKLPEGANAGSKDAFLQPGVKQVAAGYALYGSSTMLVLTTGNGVNGFTLD 183          
BLAST of FC878332 vs. ExPASy Swiss-Prot
Match: F16PA_LAWIP (Fructose-1,6-bisphosphatase class 1 OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=fbp PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.363e-38
Identity = 82/183 (44.81%), Postives = 119/183 (65.03%), Query Frame = 2
Query:  329 MTITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVEPS-KRGRYCVVFDPLDGSSNIDCGVSIGTIFGIYMMK--DSHEPTLDDVLQPGNNMLAAGYCMYGSSCTLVLSTGSGVHGFTLDPS 868
            +T+T  +L +Q + P++ G F+ L   ++L  K +  +VNKAGL  ++G  G+ N+QGE+ +KLD  ++ V +  +  SG  C + SEE  E I V  +  RG Y ++FDPLDGSSNID  +++GTIF I   K   + +  LD+VLQPG+  +AAGY +YG+S  LV + G GVHGFTLDPS
Sbjct:    5 VTVTEHLLLQQQRAPQATGHFTSLFHDLILSAKIISRSVNKAGLLDVLGGTGDINIQGEKVQKLDEFADKVLLYRMERSGVLCAMASEEHAELIKVSAAFPRGDYILIFDPLDGSSNIDVNINVGTIFSILRRKPGKTGDVELDEVLQPGSEQIAAGYFLYGTSTMLVYTAGQGVHGFTLDPS 187          
BLAST of FC878332 vs. ExPASy Swiss-Prot
Match: F16PA_DESDG (Fructose-1,6-bisphosphatase class 1 OS=Desulfovibrio desulfuricans (strain G20) GN=fbp PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.363e-38
Identity = 86/185 (46.49%), Postives = 117/185 (63.24%), Query Frame = 2
Query:  329 MTITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFV-EPSKRGRYCVVFDPLDGSSNIDCGVSIGTIFGIYMMK----DSHEPTLDDVLQPGNNMLAAGYCMYGSSCTLVLSTGSGVHGFTLDPS 868
            +T+T  +L  Q+K P + G F+ LL  ++L  K +  +VNKAGL  ++G  G+ NVQGE  +KLD  +N V +  +  +G  C + SEE+ + I V E  + G Y ++FDPLDGSSNID  +++GTIF I   K     S + TL DVLQ G   +AAGY +YG S  LV S+G GVHGFTLDPS
Sbjct:    4 VTVTEHLLLHQTKSPAATGQFTALLYDLILAAKIISKSVNKAGLLDVLGGTGQVNVQGEHVQKLDEYANRVLIHRMERTGVLCAMASEENADLIRVPERFEAGDYILIFDPLDGSSNIDVNINVGTIFSILKRKPGASGSKDVTLGDVLQSGVEQVAAGYFLYGPSTMLVYSSGQGVHGFTLDPS 188          
BLAST of FC878332 vs. ExPASy Swiss-Prot
Match: F16PA_LEPBP (Fructose-1,6-bisphosphatase class 1 OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=fbp PE=3 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 2.325e-38
Identity = 92/186 (49.46%), Postives = 121/186 (65.05%), Query Frame = 2
Query:  326 LMTITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAK-LIGLAGETNVQGEEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVEPSKR-GRYCVVFDPLDGSSNIDCGVSIGTIFGIY--MMKDSHEPTLD-DVLQPGNNMLAAGYCMYGSSCTLVLSTGSGVHGFTLDPS 868
            L+++++F+L EQ K P + G+FS LLSH+V   K V   V KAGL   ++G   +TNVQGE Q KLD  +++ F ++L   G  C+L SEE E+ I +      G+Y +  DPLDGSSNID  VSIGTIF I+  +  +S EP  + D+LQ G+    AGY +YGSS  LVLSTG GV GFTLDPS
Sbjct:   10 LISLSQFILEEQLKIPHASGEFSALLSHLVYAAKIVGREVRKAGLLDDILGATEDTNVQGETQMKLDQYADNAFNQSLKICGHLCVLASEEHEDIIPIPGGYNIGKYTMAIDPLDGSSNIDTNVSIGTIFSIHQRLEPNSKEPGNERDLLQKGHLQRCAGYIIYGSSTMLVLSTGKGVSGFTLDPS 195          
BLAST of FC878332 vs. ExPASy Swiss-Prot
Match: F16PA_LEPBA (Fructose-1,6-bisphosphatase class 1 OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=fbp PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.325e-38
Identity = 92/186 (49.46%), Postives = 121/186 (65.05%), Query Frame = 2
Query:  326 LMTITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAK-LIGLAGETNVQGEEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVEPSKR-GRYCVVFDPLDGSSNIDCGVSIGTIFGIY--MMKDSHEPTLD-DVLQPGNNMLAAGYCMYGSSCTLVLSTGSGVHGFTLDPS 868
            L+++++F+L EQ K P + G+FS LLSH+V   K V   V KAGL   ++G   +TNVQGE Q KLD  +++ F ++L   G  C+L SEE E+ I +      G+Y +  DPLDGSSNID  VSIGTIF I+  +  +S EP  + D+LQ G+    AGY +YGSS  LVLSTG GV GFTLDPS
Sbjct:   10 LISLSQFILEEQLKIPHASGEFSALLSHLVYAAKIVGREVRKAGLLDDILGATEDTNVQGETQMKLDQYADNAFNQSLKICGHLCVLASEEHEDIIPIPGGYNIGKYTMAIDPLDGSSNIDTNVSIGTIFSIHQRLEPNSKEPGNERDLLQKGHLQRCAGYIIYGSSTMLVLSTGKGVSGFTLDPS 195          
BLAST of FC878332 vs. ExPASy Swiss-Prot
Match: F16PA_HALHL (Fructose-1,6-bisphosphatase class 1 OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=fbp PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.325e-38
Identity = 87/180 (48.33%), Postives = 116/180 (64.44%), Query Frame = 2
Query:  332 TITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNDVFVKALISSGRTCILVSEE-DEEAIFVEPSKRGRYCVVFDPLDGSSNIDCGVSIGTIFGIYMM-KDSHEPTLDDVLQPGNNMLAAGYCMYGSSCTLVLST-GSGVHGFTLD 862
            T+T +++  Q   PE+ G+F+ LL+ I + CK +   VNK  L  ++G A   NVQGE QKKLDV++N+VF++AL  +G    LVSEE D+      PS+RGRY ++ DPLDGSSNID  VS+GTIF I    + S  P+  D LQ G   +AAGYC+YG S  LVL+  G GV  FTL+
Sbjct:    6 TLTNYIIETQRNLPEATGEFTGLLNDISVACKRIADLVNKGDLVGMLGSADSENVQGETQKKLDVVTNEVFIEALTQNGHIAGLVSEEMDDIYTLPNPSQRGRYLLLCDPLDGSSNIDVNVSVGTIFSIVRAPQGSENPSAGDFLQHGTEQVAAGYCLYGPSTILVLAVKGQGVQMFTLN 185          
BLAST of FC878332 vs. ExPASy Swiss-Prot
Match: F16PA_FLAJ1 (Fructose-1,6-bisphosphatase class 1 OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=fbp PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.179e-38
Identity = 84/184 (45.65%), Postives = 120/184 (65.22%), Query Frame = 2
Query:  332 TITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVEPS---KRGRYCVVFDPLDGSSNIDCGVSIGTIFGIY--MMKDSHEPTLDDVLQPGNNMLAAGYCMYGSSCTLVLSTGSGVHGFTLDPS 868
            T+  F++  Q     S G+ S +++ I L  K V   VNKAGL  +IG AGE N+QGE+Q+KLDV +N+VF++ LI+    C + SEE+++ I V+ S      +Y ++ DPLDGSSNID  VS+GTIF ++  +       T +D LQPG N +AAGY +YG+S  LV +TG GV+GFTL+P+
Sbjct:    7 TLGEFIIENQKAFQYSSGELSRIINSIRLAAKVVNYKVNKAGLVDIIGAAGEQNIQGEDQQKLDVYANEVFIQTLINREIVCGIASEENDDFITVQGSDNCHNNKYVILMDPLDGSSNIDVNVSVGTIFSVFRRITPIGTPVTSEDFLQPGINQVAAGYVIYGTSTMLVYTTGFGVNGFTLNPA 190          
BLAST of FC878332 vs. ExPASy Swiss-Prot
Match: F16PA_ECO5E (Fructose-1,6-bisphosphatase class 1 OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=fbp PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.765e-38
Identity = 83/183 (45.36%), Postives = 114/183 (62.30%), Query Frame = 2
Query:  326 LMTITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVEPSKRGRYCVVFDPLDGSSNIDCGVSIGTIFGIY--MMKDSHEPTLDDVLQPGNNMLAAGYCMYGSSCTLVLSTGSGVHGFTLDPS 868
            + T+  F++ +Q +   + G+ + LLS I LG K +   +NKAGL  ++G +G  NVQGE Q+KLD+ +N+    AL +      + SEE++E +  E  +  +Y V+ DPLDGSSNID  VS+GTIF IY  +       T +D LQPGN  +AAGY +YGSS  LV STG GVH FT DPS
Sbjct:    1 MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTMLVYSTGCGVHAFTYDPS 183          
BLAST of FC878332 vs. ExPASy Swiss-Prot
Match: F16PA_ECO57 (Fructose-1,6-bisphosphatase class 1 OS=Escherichia coli O157:H7 GN=fbp PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.765e-38
Identity = 83/183 (45.36%), Postives = 114/183 (62.30%), Query Frame = 2
Query:  326 LMTITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVEPSKRGRYCVVFDPLDGSSNIDCGVSIGTIFGIY--MMKDSHEPTLDDVLQPGNNMLAAGYCMYGSSCTLVLSTGSGVHGFTLDPS 868
            + T+  F++ +Q +   + G+ + LLS I LG K +   +NKAGL  ++G +G  NVQGE Q+KLD+ +N+    AL +      + SEE++E +  E  +  +Y V+ DPLDGSSNID  VS+GTIF IY  +       T +D LQPGN  +AAGY +YGSS  LV STG GVH FT DPS
Sbjct:    1 MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTMLVYSTGCGVHAFTYDPS 183          
BLAST of FC878332 vs. ExPASy Swiss-Prot
Match: F16PA_SALTY (Fructose-1,6-bisphosphatase class 1 OS=Salmonella typhimurium GN=fbp PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.835e-38
Identity = 82/183 (44.81%), Postives = 115/183 (62.84%), Query Frame = 2
Query:  326 LMTITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVEPSKRGRYCVVFDPLDGSSNIDCGVSIGTIFGIY--MMKDSHEPTLDDVLQPGNNMLAAGYCMYGSSCTLVLSTGSGVHGFTLDPS 868
            + T+  F++ +Q +  ++ G+ + LLS I LG K +   +NKAGL  ++G +G  NVQGE Q+KLD+ +N+    AL +      + SEE++E +  E  +  +Y V+ DPLDGSSNID  VS+GTIF IY  +       T +D LQPGN  +AAGY +YGSS  LV +TG GVH FT DPS
Sbjct:    1 MKTLGEFIVEKQHEFSQATGELTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTMLVYTTGCGVHAFTYDPS 183          
The following BLAST results are available for this feature:
BLAST of FC878332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
F16PA_MAGSA1.363e-3847.49Fructose-1,6-bisphosphatase class 1 OS=Magnetospir... [more]
F16PA_LAWIP1.363e-3844.81Fructose-1,6-bisphosphatase class 1 OS=Lawsonia in... [more]
F16PA_DESDG1.363e-3846.49Fructose-1,6-bisphosphatase class 1 OS=Desulfovibr... [more]
F16PA_LEPBP2.325e-3849.46Fructose-1,6-bisphosphatase class 1 OS=Leptospira ... [more]
F16PA_LEPBA2.325e-3849.46Fructose-1,6-bisphosphatase class 1 OS=Leptospira ... [more]
F16PA_HALHL2.325e-3848.33Fructose-1,6-bisphosphatase class 1 OS=Halorhodosp... [more]
F16PA_FLAJ15.179e-3845.65Fructose-1,6-bisphosphatase class 1 OS=Flavobacter... [more]
F16PA_ECO5E6.765e-3845.36Fructose-1,6-bisphosphatase class 1 OS=Escherichia... [more]
F16PA_ECO576.765e-3845.36Fructose-1,6-bisphosphatase class 1 OS=Escherichia... [more]
F16PA_SALTY8.835e-3844.81Fructose-1,6-bisphosphatase class 1 OS=Salmonella ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA12AH09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12AH09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878332 ID=FC878332; Name=FC878332; organism=Citrus clementina; type=EST; length=868bp
CATACACGTCCTCTTCAACATACACGCAAAACAACATAACCGTCGAATCA
GATCGTTTCATCGAGTACAAGCTGACGAAACACGCTATCTTCACTTTTCA
GTGACGACCACCCAACCTTTCTCTCACTTTCCACCCGCCACGTGTCCTTC
CACTCTTCCATTTCCTGCCGATAACACAATCCCCTACGCTTACACATATA
TCCGCTCTCAATCTCACGCCCTTGAATCCAGCGCTTTATCTTTGCATATC
TCTTAGAAAACGACAGCGTTTCTCTTTTAACCGCCGAAGAAGATGGATCA
CGAAGCGGACGCGCACCGGACGGACTTGATGACTATTACTCGTTTTGTGC
TGAACGAGCAGTCGAAGCACCCGGAGTCCCGCGGCGACTTCAGCATCTTG
CTTAGTCACATTGTTCTCGGCTGCAAGTTCGTTTGTTCTGCTGTTAACAA
GGCGGGTCTTGCCAAGCTAATTGGACTTGCTGGAGAAACCAATGTTCAGG
GTGAAGAGCAAAAGAAATTAGATGTCCTCTCTAATGATGTCTTTGTCAAA
GCTTTGATCAGCAGTGGCCGAACATGCATCCTTGTCTCCGAAGAAGATGA
AGAGGCAATATTTGTGGAGCCCTCTAAGCGTGGAAGGTACTGTGTTGTTT
TTGATCCGTTGGATGGGTCTTCTAACATTGATTGTGGTGTTTCCATTGGA
ACGATATTTGGGATTTATATGATGAAAGATAGCCATGAACCGACTCTAGA
TGATGTGTTGCAACCTGGCAACAATATGTTGGCTGCTGGCTATTGCATGT
ATGGAAGCTCTTGCACGCTTGTATTGAGCACTGGGAGTGGTGTTCATGGG
TTTACGCTTGATCCGTCT
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