FC878379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878379 vs. ExPASy Swiss-Prot
Match: GBB1_CRIGR (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Cricetulus griseus GN=GNB1 PE=2 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 1.907e-14 Identity = 46/163 (28.22%), Postives = 80/163 (49.08%), Query Frame = 1 Query: 418 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSNLAFSMEGQLLASGGLDGLVQIWDTSSGNLKCTLEGPG--GGVEWVSWHPRGRIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 900 T F+GH+ +V S++ +P D L +G D W + +G GH+ ++ + F G A+G D +++D + T G+ VS+ GR++LAG +D +W+A +A + +GH + V+C T DG + TGS D+ L++ Sbjct: 177 TTTFTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338
BLAST of FC878379 vs. ExPASy Swiss-Prot
Match: GBB1_CANFA (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Canis familiaris GN=GNB1 PE=2 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 1.907e-14 Identity = 46/163 (28.22%), Postives = 80/163 (49.08%), Query Frame = 1 Query: 418 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSNLAFSMEGQLLASGGLDGLVQIWDTSSGNLKCTLEGPG--GGVEWVSWHPRGRIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 900 T F+GH+ +V S++ +P D L +G D W + +G GH+ ++ + F G A+G D +++D + T G+ VS+ GR++LAG +D +W+A +A + +GH + V+C T DG + TGS D+ L++ Sbjct: 177 TTTFTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338
BLAST of FC878379 vs. ExPASy Swiss-Prot
Match: GBB1_BOVIN (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Bos taurus GN=GNB1 PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 1.907e-14 Identity = 46/163 (28.22%), Postives = 80/163 (49.08%), Query Frame = 1 Query: 418 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSNLAFSMEGQLLASGGLDGLVQIWDTSSGNLKCTLEGPG--GGVEWVSWHPRGRIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 900 T F+GH+ +V S++ +P D L +G D W + +G GH+ ++ + F G A+G D +++D + T G+ VS+ GR++LAG +D +W+A +A + +GH + V+C T DG + TGS D+ L++ Sbjct: 177 TTTFTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338
BLAST of FC878379 vs. ExPASy Swiss-Prot
Match: CIAO1_IXOSC (Probable cytosolic iron-sulfur protein assembly protein OS=Ixodes scapularis GN=ISCW023049 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.907e-14 Identity = 50/163 (30.67%), Postives = 78/163 (47.85%), Query Frame = 1 Query: 433 GHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASE---IQGHKDSVSNLAFSMEGQLLASGGLDGLVQIWDTSSGNLK--CTLEGPGGGVEWVSWHPRGRIVLAGSEDSTVWMWNA---DRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLR 897 GH D V++VA +P+ T++A+ GGD W + G W + + GH+ +V +++S G+ LAS DG IW + TLEG V+ W P GR + S D TVW+W + ++ + H V + PD + + S D T+R Sbjct: 11 GHEDRVWNVAWNPS-GTILASCGGDKSIRLWGLEGGSWVCKSVLLDGHQRTVRGVSWSNCGRYLASSSFDGTTCIWRRQDDTFESCATLEGHENEVKACGWSPSGRFLATCSRDKTVWIWEVGEDEEFECASVQTCHSQDVKKVLWHPDRDELASASYDNTIR 172
BLAST of FC878379 vs. ExPASy Swiss-Prot
Match: LIS1_XENTR (Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 2.490e-14 Identity = 49/160 (30.63%), Postives = 73/160 (45.62%), Query Frame = 1 Query: 421 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSNLAFSMEGQLLASGGLDGLVQIWDTSSGNLKCTLEGPGGGVEWVSWHPRGRIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 900 + SGH V V P + +V T D W GD+ ++GH DSV +++F G+LLAS D +++WD T+ G V V+ P G +++ S D T+ MW + F+GH V DG I + S+D T+RV Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMV-TASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260 HSP 2 Score: 70.0922 bits (170), Expect = 1.973e-11 Identity = 47/178 (26.40%), Postives = 79/178 (44.38%), Query Frame = 1 Query: 427 FSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSNLAFSME--------------------GQLLASGGLDGLVQIWDTSSGNLKCTLEGPGGGVEWVSWHPRGRIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 900 F+GH + V V + D TL+A+ D W + + +E++ H+ V ++++ E G L SG D +++WD S G TL G V V +HP G+ +L+ ++D T+ +W+ + + H VT DF + TGS D T++V Sbjct: 230 FTGHREWVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
BLAST of FC878379 vs. ExPASy Swiss-Prot
Match: LIS1A_XENLA (Lissencephaly-1 homolog A OS=Xenopus laevis GN=pafah1b1-A PE=2 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 2.490e-14 Identity = 49/160 (30.63%), Postives = 73/160 (45.62%), Query Frame = 1 Query: 421 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSNLAFSMEGQLLASGGLDGLVQIWDTSSGNLKCTLEGPGGGVEWVSWHPRGRIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 900 + SGH V V P + +V T D W GD+ ++GH DSV +++F G+LLAS D +++WD T+ G V V+ P G +++ S D T+ MW + F+GH V DG I + S+D T+RV Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMV-TASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260 HSP 2 Score: 70.0922 bits (170), Expect = 1.973e-11 Identity = 47/178 (26.40%), Postives = 79/178 (44.38%), Query Frame = 1 Query: 427 FSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSNLAFSME--------------------GQLLASGGLDGLVQIWDTSSGNLKCTLEGPGGGVEWVSWHPRGRIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 900 F+GH + V V + D TL+A+ D W + + +E++ H+ V ++++ E G L SG D +++WD S G TL G V V +HP G+ +L+ ++D T+ +W+ + + H VT DF + TGS D T++V Sbjct: 230 FTGHREWVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
BLAST of FC878379 vs. ExPASy Swiss-Prot
Match: GBB1_PONAB (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Pongo abelii GN=GNB1 PE=2 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 2.490e-14 Identity = 46/163 (28.22%), Postives = 79/163 (48.47%), Query Frame = 1 Query: 418 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSNLAFSMEGQLLASGGLDGLVQIWDTSSGNLKCTLEGPG--GGVEWVSWHPRGRIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 900 T F+GH+ +V S++ +P D L +G D W + +G GH+ ++ + F G A+G D +++D + T G+ VS+ GR++LAG +D +W+A +A + +GH V+C T DG + TGS D+ L++ Sbjct: 177 TTTFTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDDRVSCLGVTDDGMAVATGSWDSFLKI 338
BLAST of FC878379 vs. ExPASy Swiss-Prot
Match: CIAO1_DROWI (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila willistoni GN=Ciao1 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.252e-14 Identity = 61/215 (28.37%), Postives = 87/215 (40.47%), Query Frame = 1 Query: 421 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGF-FWRINQGDWASEI---QGHKDSVSNLAFSMEGQLLASGGLDGLVQIWDTSSGNLKC--TLEGPGGGVEWVSWHPRGRIVLAGSEDSTVWMWNA------DRAAYLN----------------------------MF---------------SGHGSSVTCGDFTPDGKTICTGSDDATLRV 900 H GH ++ VA P T + G +DK W ++ W+++ GHK ++ + +S GQ LAS D IW SSG +C TLEG V+ VSW G ++ S D +VW+W + AA LN MF S H S+V DF DG+ + + SDD TL++ Sbjct: 8 HTLQGHKGRIWGVAWHPKGNTFASCG--EDKAIRIWSLSGNSWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSKSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKEILASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDFDADGERLVSCSDDTTLKI 220
BLAST of FC878379 vs. ExPASy Swiss-Prot
Match: CIAO1_DROAN (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila ananassae GN=Ciao1 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.252e-14 Identity = 50/169 (29.59%), Postives = 76/169 (44.97%), Query Frame = 1 Query: 421 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGF-FWRINQGDWASEI---QGHKDSVSNLAFSMEGQLLASGGLDGLVQIWDTSSGNLKC--TLEGPGGGVEWVSWHPRGRIVLAGSEDSTVWMWNA---DRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 900 H GH ++ VA P + G +DK W +N W ++ GHK ++ + +S GQ LAS DG IW SSG +C TLEG V+ VSW G ++ S D +VW+W D + + H V + P + + + S D T+++ Sbjct: 8 HTLQGHKGRIWGVAWHPKGNVFASCG--EDKAIRIWSLNGNTWTTKTILSDGHKRTIREIRWSPCGQYLASASFDGTTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKELLASASYDNTIKM 174
BLAST of FC878379 vs. ExPASy Swiss-Prot
Match: TAF5_YEAST (Transcription initiation factor TFIID subunit 5 OS=Saccharomyces cerevisiae GN=TAF5 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.247e-14 Identity = 50/170 (29.41%), Postives = 76/170 (44.71%), Query Frame = 1 Query: 394 NTEQPDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGF-FWRINQGDWASEIQGHKDSVSNLAFSMEGQLLASGGLDGLVQIWDTSSGNLKCTLEGPGGGVEWVSWHPRGRIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 900 N + D + GHS VYS + SP + L++ G +DK W ++ +GH V +++FS G A+ D ++W G V+ VS+HP G V GS D T MW+ + +F GH + V PDG+ + TGS+D + V Sbjct: 510 NDKDEDPTCKTLVGHSGTVYSTSFSPDNKYLLS--GSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINV 677 The following BLAST results are available for this feature:
BLAST of FC878379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 243
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878379 ID=FC878379; Name=FC878379; organism=Citrus clementina; type=EST; length=900bpback to top |