FC878391
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: HAT2_KLULA (Histone acetyltransferase type B subunit 2 OS=Kluyveromyces lactis GN=HAT2 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.063e-14 Identity = 54/188 (28.72%), Postives = 90/188 (47.87%), Query Frame = 2 Query: 272 GSVKIYDTALPPTAN-PIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSV---RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR-EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820 G V I+D + + I S H + +NPT +++S D TV LW V + +TF H V + W+ S +F + S D TL I D + + + F LA ++K + L+A+A D ++ ++D+R + P+ + GH +V ++FSPH+ LL S D + +WD Sbjct: 145 GIVYIFDRNIKEKDHGAIASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSSAFNTLA--FSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWD 330
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: LIS1_DROME (Lissencephaly-1 homolog OS=Drosophila melanogaster GN=Lis-1 PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 5.306e-14 Identity = 66/237 (27.85%), Postives = 108/237 (45.57%), Query Frame = 2 Query: 206 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDW----------------NK---YDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDH 859 D V D+A+ ++ LL + AD S+K++D + I+++H H V S + P D +++S D T+K+W V V+T+ H V + S +F + S D T+R+W + + HE + W NK + +AS S DK+I+IWDV + + + L+GH VR + F P + L S S D T+ +WD + + Y H Sbjct: 151 DSVQDVAF-DAQGKLLASCSADLSIKLWD--FQQSYECIKTMHGHDHNVSSVAFVPAG-DYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGS-IFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDV-SVGLCLLTLSGHDNWVRGLAFHPGGK-YLVSASDDKTIRVWDLRNKRCMKTLYAH 380
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: KTNB1_DANRE (Katanin p80 WD40-containing subunit B1 OS=Danio rerio GN=katnb1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.306e-14 Identity = 65/215 (30.23%), Postives = 99/215 (46.05%), Query Frame = 2 Query: 176 LTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820 L E+VA + V L +S LL D V I+ + P N I SL HT V +N + + + S +++LW ++ +RT H + + ++P + S S D +++WDVR G H + + C D +ASAS D ++K+WD+ ++ I H AV V+F P+ LLAS S D TV LWD Sbjct: 13 LQEIVAHSS--NVSSLVLGKSSGRLLATGGEDCRVNIWAVSKP---NCIMSLTGHTSAVGCIQFNSSE-ERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPM-GEYLASGSVDSNIKLWDVRRKGCVFRYKGHT-QAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKM-ITEFTSHTSAVNVVQFHPNEY-LLASGSADRTVKLWD 217 HSP 2 Score: 72.4034 bits (176), Expect = 3.803e-12 Identity = 56/187 (29.95%), Postives = 87/187 (46.52%), Query Frame = 2 Query: 308 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFC-SASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHT 865 T+ ++ + H+ V S + T D V +W V +P + + H V +N V S SG +LR+WD+ + H+ I + D++ + L AS SVD +IK+WDVR + + GH AVR + FSP + LAS S D TV LWD ++ ++ + HT Sbjct: 9 TSWKLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSG--SLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYL-ASGSVDSNIKLWDVRR-KGCVFRYKGHTQAVRCLAFSPDGK-WLASASDDSTVKLWD-LIAGKMITEFTSHT 189
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: LIS1_XENTR (Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 6.930e-14 Identity = 64/225 (28.44%), Postives = 101/225 (44.89%), Query Frame = 2 Query: 206 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDW---NKYDDC----------------LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 823 D V D+++ S LL + AD ++K++D IR++H H V S P D +++S D T+K+W V V+TF H V N + + S S D T+R+W V + HE + W + Y + S S DK+IK+WD+ + + + L GH VR V+F P + +L SC+ D T+ +WD+ Sbjct: 151 DSVQDISFDHS-GKLLASCSADMTIKLWDFQ---GFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDI-SIGMCLMTLVGHDNWVRGVQFHPGGKFIL-SCADDKTIRIWDY 367
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: LIS1A_XENLA (Lissencephaly-1 homolog A OS=Xenopus laevis GN=pafah1b1-A PE=2 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 6.930e-14 Identity = 64/225 (28.44%), Postives = 101/225 (44.89%), Query Frame = 2 Query: 206 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDW---NKYDDC----------------LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 823 D V D+++ S LL + AD ++K++D IR++H H V S P D +++S D T+K+W V V+TF H V N + + S S D T+R+W V + HE + W + Y + S S DK+IK+WD+ + + + L GH VR V+F P + +L SC+ D T+ +WD+ Sbjct: 151 DSVQDISFDHS-GKLLASCSADMTIKLWDFQ---GFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDI-SIGMCLMTLVGHDNWVRGVQFHPGGKFIL-SCADDKTIRIWDY 367
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: HAT2_CRYNE (Histone acetyltransferase type B subunit 2 OS=Cryptococcus neoformans GN=HAT2 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.930e-14 Identity = 47/182 (25.82%), Postives = 82/182 (45.05%), Query Frame = 2 Query: 212 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-PTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS--------------TMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWD-VRNYRVP 709 V D+ W ++++ + DG + I+DT TA + H E++ + P+ F+T S D+T+ LW + + T +F+ H V +W+P F SAS D + IWD+ +G+ + H ++ W+ IASAS D +++W+ R+ R P Sbjct: 243 VADVEWHPKNENMFGSVSDDGQIMIWDTRSDNTAKASSQVQGHNAEINCISFAPSSEYLFLTGSSDNTIALWDLRKLSTKHHSFEAHTNDVLQLSWSPTSPVHFASASADRRVHIWDLDAIGAEQTPDDAEDGPPELLFVHGGHTSKVCDISWSPSSPWTIASASEDNILQVWEPSRHLRTP 424 HSP 2 Score: 68.1662 bits (165), Expect = 7.171e-11 Identity = 55/227 (24.23%), Postives = 91/227 (40.09%), Query Frame = 2 Query: 170 PALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS-------VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI---IPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820 P EL+A T G + H+S A A+G K P L T+E + +N + +++S D T+ W + + +R + H+ V + W+P++ ++F S S D + IWD R + + H EI + + L + S D +I +WD+R H V ++ +SP AS S D V +WD Sbjct: 147 PQNPELIATKTVTGEVYVFDRTKHES---KAPANGECK-----------PDIRLKGQTKEGYGLSWNALKEGHILSASEDTTIGHWDIQGYSKQDPSLQPLRLYTGHSAYVADVEWHPKNENMFGSVSDDGQIMIWDTRSDNTAKASSQVQGHNAEINCISFAPSSEYLFLTGSSDNTIALWDLRKLSTKHHSFEAHTNDVLQLSWSPTSPVHFASASADRRVHIWD 359
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: SEC31_CHAGB (Protein transport protein SEC31 OS=Chaetomium globosum GN=SEC31 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.051e-14 Identity = 56/234 (23.93%), Postives = 106/234 (45.30%), Query Frame = 2 Query: 149 LDLSPAAPALTELVAFDTADGVYDLAW---SESHDSLLIA-AVADGSVKIYDTA--LPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKS---IKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820 L+L P A TE YD+AW S+ H ++A A+ DGS++++D A L + +HT + + +NP R T+ + +W T D T+ R A+ + WN + S++ + S + +WD++ +++ + + + A W+ + + +A+ D + I +W++RN + P L GH + + + LL SC D +W+ Sbjct: 56 LELQPVASISTE-------SRFYDIAWGAPSDEHPRGVVAGAMEDGSLQLWDAAKLLAGEEAVMSRDTKHTGPIKALQFNPLRPQVLATAGSKGELFVWDTNDTSTAFRLGTAAAHDIDCVAWNRKVSNILATGSAGGFVTVWDLKTKKASLTLNNNRKPVSAIAWDPTNSTNLLTATSDDNTPLILLWNLRNSQAPEKTLQGHDQGILSLSWCQQDPGLLISCGKDNRTLVWN 282
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: WDR24_CHICK (WD repeat-containing protein 24 OS=Gallus gallus GN=WDR24 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.182e-13 Identity = 48/196 (24.49%), Postives = 90/196 (45.92%), Query Frame = 2 Query: 242 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS-TMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCS--YDMTVCLWD 820 ++LL A +G V ++ P + EH R V+ ++PT ++ S D +K + + + SV TF + V + ++ R F + + +++WD+R + AH + CDW+ D +A+ DK +K+WD+ R +V +VK+ P ++ +A+CS D + +WD Sbjct: 3 ENLLATAATNGVVVTWNLGKPSRNKQDQLFTEHKRTVNKVCFHPTEVYMLLSGSQDGYMKCFDLRKKDSVSTFSGQSESVRDVQFSIRDYFTFAATFENGNVQLWDIRRPDRYERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMNTTRAKEIYCVQTIASVARVKWRPECKHHIATCSMMVDHNIYVWD 198
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: SEC31_NEUCR (Protein transport protein sec-31 OS=Neurospora crassa GN=sec-31 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.182e-13 Identity = 49/234 (20.94%), Postives = 98/234 (41.88%), Query Frame = 2 Query: 149 LDLSPAAPALTELVAFDTADGVYDLAWSESHDS----LLIAAVADGSVKIYDTALPPTANP--IRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKS---IKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 820 LD L + + YD+AW + +D ++ A+ +GS+ ++D I +HT + + +NP R T+ + +W V D R A+ + WNP+ +++ + + +WD++ +++ + H + A W+ + + +AS D + I +W++RN + P L GH + + + LL SC D +W+ Sbjct: 49 LDSQEQGLELQPIASITAESRFYDIAWGQPNDEHPRGVIAGAMENGSLDLWDAEKLIAGEDALISRTTKHTGPIKALQFNPLRPQVLATAGAKGELFVWDVNDTSAPFRLGTAAAHDIDCLAWNPKVANILATGGAGGFVTVWDLKTKKASLTLNNHRKAVSAIAWDPENSTKLLTASSDDTAPVILLWNLRNSQAPEKTLQGHDQGILSLSWCQQDAGLLLSCGKDNRTLIWN 282
BLAST of FC878391 vs. ExPASy Swiss-Prot
Match: LIS1B_XENLA (Lissencephaly-1 homolog B OS=Xenopus laevis GN=pafah1b1-B PE=2 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 1.182e-13 Identity = 63/225 (28.00%), Postives = 101/225 (44.89%), Query Frame = 2 Query: 206 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDW---NKYDDC----------------LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 823 D V D+++ S LL + AD ++K++D +R++H H V S P D +++S D T+K+W V V+TF H V N + + S S D T+R+W V + HE + W + Y + S S DK+IK+WD+ + + + L GH VR V+F P + +L SC+ D T+ +WD+ Sbjct: 151 DSVQDISFDHS-GKLLASCSADMTIKLWDFQ---GFECLRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKRSGKPGPFLLSGSRDKTIKMWDI-SIGMCLMTLVGHDNWVRGVQFHPGGKFIL-SCADDKTIRIWDY 367 The following BLAST results are available for this feature:
BLAST of FC878391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878391 ID=FC878391; Name=FC878391; organism=Citrus clementina; type=EST; length=877bpback to top |