FC878413

Overview
NameFC878413
Unique NameFC878413
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length918
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.003e-18
Identity = 65/231 (28.14%), Postives = 113/231 (48.92%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVK--ARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLL----NAVDEIFDKTSKRKQP 829
            I+G+LH    +   H+   +L++K GP+ ++QLG VP V++SS E A++ LKTHD    +RP+  +A+  S    ++        WR+ RK+ V E  S K+V SF+ V +EE +  + +++  A      D+S  +F           FG  F +++   ++   +  +  E ++ LT F + D F      GW  G+     KG   +     N ++ + D   K+ QP
Sbjct:   41 IVGNLHQL--QGMVHRCLHELSKKHGPVMHLQLGFVPLVLISSSEAAEEALKTHDIECCTRPNTNAARVFSRNNKNIGLGAYSDEWRELRKVAVREYFSVKKVQSFRYVREEENHLMVKKLRDLALKQSPVDLSKTLFCLAASTVFRPVFGQSFSDNKHFSEEK--IEELVFEAQKSLT-FKFSDLF-PIPGLGWFIGFVSGQHKGLHKVFIEVDNFLNHMIDDHQKQNQP 265          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.003e-18
Identity = 62/188 (32.98%), Postives = 90/188 (47.87%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLE--TDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIE-VEELLTGFYYGDFF 709
            IIG+LH      KPH S  KL+EK GP+  ++ G V  VV S+ E  K+VLKT D    SRP +     ++    D+ F P   YWR+ RK+ V EL + KRV SF+    EEV   +  +     LE   +++  +        C   FG+       +G K + L    I+   E++  F   D+F
Sbjct:   38 IIGNLHQLGS--KPHSSMFKLSEKYGPLMALRFGSVSTVVASTPETVKEVLKTFDAECCSRPYMTYPARLTYNLKDIGFCPYTKYWREVRKMTVVELYTAKRVQSFQHTRKEEVASLVDFITQAASLEKPVNLNTKLMKLSGSVICRVVFGINL-----KGSKLENLYEEVIQGTMEVVGSFAAADYF 218          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.235e-18
Identity = 65/191 (34.03%), Postives = 92/191 (48.17%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLE-TDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVW 724
            IIG+L   +   KPH++ + +    GPI +++LG V  VV +SK +A+Q LK HD  FASRP    AKH++    D+ F+P G  WR  RKI    L S K +  FK V  EEV   ++R   R G +  ++  L+     +       G R     D   K+    S+  E+  L   F  GDF     W
Sbjct:   42 IIGNLP--HMGTKPHRTLSAMVTTYGPILHLRLGFVDVVVAASKSVAEQFLKIHDANFASRPPNSGAKHMAYNYQDLVFAPYGHRWRLLRKISSVHLFSAKALEDFKHVRQEEVGT-LTRELVRVGTKPVNLGQLVNMCVVNALGREMIGRRLF-GADADHKADEFRSMVTEMMALAGVFNIGDFVPSLDW 228          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.920e-18
Identity = 46/114 (40.35%), Postives = 70/114 (61.40%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEV 496
            I+GHL L    + PHK    LA+K GP+F I+LG  PA+V+S+ E++K++  T+D   +SRP +++ + +S   A V  +P GPYWR+ RKI   E LS +R+     +   EV
Sbjct:   47 ILGHLSLLNGSQTPHKVLGALADKYGPLFTIKLGMKPALVLSNWEMSKELFTTNDLAVSSRPKLVAVEVMSYNQAFVGLAPYGPYWRELRKIVTFEFLSNRRIEQRNHIRVSEV 160          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.109e-17
Identity = 60/194 (30.93%), Postives = 96/194 (49.48%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGP--IFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARC----GLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEW 718
            I+GHLH  +   + H S  +L  K G     +++ G VP ++VSS   A+ V++THD + ASRP  +++  +     DV FSP G YW+Q RK+  T LLS K+V SF+   +EEV   +  ++           DMS+++ A+  D    +  G        +G+ + +       V +LL GF    +   W
Sbjct:   66 IVGHLH--HIGPQTHISLQELVAKYGHNGFLFLRAGAVPTLIVSSPSAAEAVMRTHDHICASRPWSMASHILRYNTCDVAFSPLGEYWQQTRKLMNTHLLSNKKVYSFRHGREEEVCLVVDNLREAAAKSPSTAVDMSEVLAAYTNDVVSRSVLG---STHRKKGRNTLFREMTMTNV-DLLVGFNLEYYIPRW 253          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.472e-17
Identity = 50/138 (36.23%), Postives = 80/138 (57.97%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPK--------RVNSFKVVLDEEVNRFMSRVKARCGLETD 544
            ++GHL L    + PHK+   L +K GPIF I+LG   A+V+S+ ELAK+    +D V +SRP  ++ + +S   A + ++P G YWRQ RKI   E+LS +        RV+  +  + E VN + +++ ++ GL  D
Sbjct:   44 LLGHLPLMRNTQTPHKTLGALVDKYGPIFTIKLGATNALVLSNWELAKECFTKNDIVVSSRPKPVAVELMSYNQAFIGWAPYGAYWRQLRKIVTLEILSNRRIELLSHIRVSEVQTSIKELVNVWSNQISSQYGLLDD 181          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.602e-16
Identity = 47/141 (33.33%), Postives = 83/141 (58.87%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSP-NGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCT 574
            IIG++HL  K   PH+SFA+L++  GP+  ++LG +  VV++S E A++VL+THDQ+ ++R    + + ++   A + + P +   WR  R++ VT+LLSP+R+ + K +   +V   +S +      E  +     AF T
Sbjct:   47 IIGNIHLVGKH--PHRSFAELSKTYGPVMSLKLGSLNTVVIASPEAAREVLRTHDQILSARSPTNAVRSINHQDASLVWLPSSSARWRLLRRLSVTQLLSPQRIEATKALRMNKVKELVSFISESSDREESVDISRVAFIT 185          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.602e-16
Identity = 71/260 (27.31%), Postives = 116/260 (44.62%), Query Frame = 2
Query:  155 IIGHLHLFYKERKPH-KSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVK--ARCGLETDMSDLIFAFCTDFFCLAAFGVRFME-DEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGSRNLLN---AVDEIFDKTSKRKQPLGTGAFLLHGNEDFIDVLRRVKKSDDLD 913
            IIG+LH   + R  H ++   LAE  GP+  +Q G VP V +SSKE A++VLK +D    SRP     +       D+  +P G  W   RK+ V EL S K++ SFK +++EE N  + ++   A      ++   IF    +  C   +G+   E D  E  +   +  + ++ E ++    + DFF     PG +  +   +   +R L N    VD  F          G        +   +D++  +KK  + D
Sbjct:   37 IIGNLH---QRRTLHPRNRRNLAEMYGPVALLQYGFVPVVAISSKEAAEEVLKINDLECCSRPEAAGMRATFYNFKDIGMAPFGDEWSLMRKLSVVELFSVKKLQSFKYIIEEENNLCVKKLSEFATRQSPVNLERAIFTLVGNIVCRIGYGINLYECDFFEADR---VVDLVLKAEAVIRETVFSDFF-----PGRIGRFIDCISGQNRRLKNNFSVVDTFFQNVLNEHLKPG------RESSTIVDLMIDMKKKQEND 279          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.092e-16
Identity = 59/195 (30.26%), Postives = 93/195 (47.69%), Query Frame = 2
Query:  158 IGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVK--ARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDE--DEGQKSKYL-ASVFIEVEELLTGFYYGDF--FSEWV 721
            IG+LH   +E  P      L  K GP+  ++ G VP VV+SSKE A++VLK HD    SRP     + +S    D+ F+P G  W+  RK+ V EL + K+   F+ + +EE +  + ++   A      ++   +F       C   FG    E E  DE   S  +  S  +E+  + + F+ G    F +W+
Sbjct:   38 IGNLHQL-QELPPRN----LNHKYGPVILLRFGFVPLVVISSKEAAEEVLKIHDLECCSRPETAGTRKISYNFKDIGFAPYGEEWKAMRKLSVVELFTAKKHQYFRSIREEENDLLVKKLTELALTRSPVNLKKTLFTLVGSIVCRIGFGFNLHECEFIDENSISDLVDKSEILEMTSMFSDFFPGGIGRFIDWI 227          
BLAST of FC878413 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.951e-16
Identity = 62/226 (27.43%), Postives = 108/226 (47.79%), Query Frame = 2
Query:  155 IIGHLH----LFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVK--ARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEGQKSKYLASVFIEVEELLTGFYYGDFFSEWVWP---GWLTGYTPRVIKGSRNLLNAVDEIFD 805
            IIG+LH    LF      H+    L++K GP+  ++LG +  VV+SSKE A++VLK HD    +RP   ++   S    D+ F+P G   R+ RK+ +    S ++V SF+ + +EE +  + ++K  A+     D+S  +F         A FG R   D+++    + +  +  EV+++      G   S  ++P   GW   +     K    +   VD + +
Sbjct:   38 IIGNLHQLRGLF------HRCLHDLSKKHGPVLLLRLGFIDMVVISSKEAAEEVLKVHDLECCTRPKTNASSKFSRDGKDIAFAPYGEVSRELRKLSLINFFSTQKVRSFRYIREEENDLMVKKLKESAKKKNTVDLSQTLFYLVGSIIFRATFGQRL--DQNKHVNKEKIEELMFEVQKV------GSLSSSDIFPAGVGWFMDFVSGRHKTLHKVFVEVDTLLN 249          
The following BLAST results are available for this feature:
BLAST of FC878413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
C71BP_ARATH1.003e-1828.14Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C71BB_ARATH1.003e-1832.98Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
F3PH_ARATH2.235e-1834.03Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C82A3_SOYBN2.920e-1840.35Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]
C71C3_MAIZE1.109e-1730.93Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C82A1_PEA2.472e-1736.23Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C76C1_ARATH1.602e-1633.33Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C71BF_ARATH1.602e-1627.31Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
C71BT_ARATH2.092e-1630.26Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C71B3_ARATH7.951e-1627.43Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA49BF04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA49BF04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878413 ID=FC878413; Name=FC878413; organism=Citrus clementina; type=EST; length=918bp
AGGAAATTAAGTTGAGGGACTAATGGCCAACTTTAGCCCCGAAATCCTCT
TTCTGTCATTCGTTGTCTCGACGGCAATCCTCTACATGATTAATAATCGG
CGAAGGTCACTGCCAAATTCACCGTCACTGCCGTCACCACCAAACAAACT
TCCGATAATAGGTCACCTTCATCTCTTCTACAAAGAGCGCAAGCCACATA
AAAGTTTCGCTAAACTCGCAGAGAAGCTGGGTCCCATATTTTACATCCAG
CTCGGCCGAGTCCCCGCCGTTGTAGTCTCCTCTAAAGAGCTGGCCAAACA
AGTTCTCAAAACTCACGACCAGGTCTTCGCCAGCCGCCCAAGCATCCTCA
GCGCCAAGCACGTCTCCGTCGGCCCCGCTGACGTCACCTTCTCCCCCAAC
GGCCCTTACTGGCGCCAAGCTCGCAAGATCTGCGTCACCGAGTTACTCAG
CCCAAAACGAGTCAACTCTTTCAAAGTCGTCCTAGATGAGGAAGTGAACC
GGTTTATGAGCCGCGTGAAAGCCCGCTGTGGGTTAGAAACAGACATGAGT
GATCTTATTTTCGCCTTCTGTACTGATTTCTTTTGCCTTGCAGCATTTGG
GGTGAGGTTCATGGAAGATGAAGACGAAGGGCAAAAGAGTAAATACTTGG
CGAGTGTTTTCATAGAGGTTGAAGAGTTGCTGACAGGGTTTTATTATGGG
GATTTTTTCTCGGAGTGGGTTTGGCCCGGCTGGCTCACTGGGTACACACC
TAGGGTGATCAAGGGTTCTCGGAACTTGTTGAATGCTGTTGATGAGATTT
TCGATAAGACTTCCAAGAGGAAGCAGCCGCTGGGTACCGGCGCATTCTTA
TTGCACGGTAATGAAGATTTTATTGATGTTTTGCGTAGAGTCAAAAAAAG
CGACGATTTGGATGTGCC
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