FC878449
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878449 vs. ExPASy Swiss-Prot
Match: NQO3_THET8 (NADH-quinone oxidoreductase subunit 3 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=nqo3 PE=1 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 6.578e-32 Identity = 79/213 (37.09%), Postives = 109/213 (51.17%), Query Frame = 1 Query: 298 IEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLV---------------------EVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFG-----SDRG--------RFTEMKRSVVDKN--LGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSGEEIGT 828 + V V+ +++P G +V+ A AG D+P FC LS G CRMCLV E++ PK ASC GM + T + + ++A+ G++EF L+NHPLDCP CD+GG C+LQD+++ +G +G RF E R VDK+ L P V RCI C RCVR+ EV G + L + RG IGT Sbjct: 2 VRVKVNDRIVEVPPGTSVMDAVFHAGYDVPLFCSEKHLSPIGACRMCLVRIGLPKKGPDGKPLLNEKGEPEIQWQPKLAASCVTAVADGMVVDTLSDVVREAQAGMVEFTLLNHPLDCPTCDKGGACELQDRTVEYGLYEKYYQKGPLELPVYTRF-EFTRRHVDKHHPLSPFVILDRERCIHCKRCVRYFEEVPGDEVLDFIERGVHTFIGT 213 HSP 2 Score: 32.3426 bits (72), Expect = 6.578e-32 Identity = 15/28 (53.57%), Postives = 18/28 (64.29%), Query Frame = 3 Query: 843 MTSELSGNVIDICPVGALTFKPFAFKAR 926 + S SGN+ DICPVGAL F+AR Sbjct: 218 LPSGFSGNITDICPVGALLDLTARFRAR 245
BLAST of FC878449 vs. ExPASy Swiss-Prot
Match: NUOG_BUCAP (NADH-quinone oxidoreductase subunit G OS=Buchnera aphidicola subsp. Schizaphis graminum GN=nuoG PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.838e-30 Identity = 63/180 (35.00%), Postives = 96/180 (53.33%), Query Frame = 1 Query: 301 EVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLV-----EVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSGEEIG 825 +++VDG + + +LQAC +G++IP FC+H L G CR C V ++ K + SC P + G I + +KK R ++E LL NHP DCP+C++GG C LQD ++ + + KR+ ++ LG +K M RCI C RCVR+ + A DL + G + G Sbjct: 3 KIYVDGKAYCMSESDNLLQACLSSGLNIPYFCWHPILGSLGACRQCAVTQYNSSLDNQGKLIMSCMTPVIDGTIISINDDTSKKFRSNIVELLLTNHPHDCPVCEEGGNCHLQDMTVMTTHNFRNYRFSKRTHKNQYLGSFIKHEMNRCIGCYRCVRYYRDYADGTDLDVYGANNNIYFG 182 HSP 2 Score: 28.4906 bits (62), Expect = 5.838e-30 Identity = 12/27 (44.44%), Postives = 18/27 (66.67%), Query Frame = 3 Query: 840 LMTSELSGNVIDICPVGALTFKPFAFK 920 ++ +E SGN+I+ICP G T K + K Sbjct: 188 VLENEHSGNLIEICPTGVFTDKTHSKK 214
BLAST of FC878449 vs. ExPASy Swiss-Prot
Match: NUOG_BUCAI (NADH-quinone oxidoreductase subunit G OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=nuoG PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.678e-29 Identity = 61/180 (33.89%), Postives = 92/180 (51.11%), Query Frame = 1 Query: 301 EVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEV-----EKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSGEEIG 825 +++VD + + +LQAC G++IP FC+H L G CR C V ++ + + SC P G I + ++ R ++E LL NHP DCP+C++GG C LQD ++ + KR+ ++ LGP +K M RCI C RCVR+ E A D G+ G + G Sbjct: 3 KIYVDSKIYNVNESDNLLQACLSVGINIPYFCWHPLLGSLGACRQCAVTQYDNFQDRKGRLIMSCMTPVTDGAIISIKSTESEVFRSAIVELLLTNHPHDCPVCEEGGHCHLQDMTVMVKHSMRNYRFKKRTHKNQYLGPFIKHEMNRCIACYRCVRYYNEYADGVDFGVYGSNNNVYFG 182 HSP 2 Score: 28.8758 bits (63), Expect = 1.678e-29 Identity = 12/27 (44.44%), Postives = 18/27 (66.67%), Query Frame = 3 Query: 840 LMTSELSGNVIDICPVGALTFKPFAFK 920 ++ SE SGN+I++CP G T K + K Sbjct: 188 VLESEHSGNLIELCPTGVFTDKTHSKK 214
BLAST of FC878449 vs. ExPASy Swiss-Prot
Match: NUOG_BLOFL (NADH-quinone oxidoreductase subunit G OS=Blochmannia floridanus GN=nuoG PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.063e-28 Identity = 61/199 (30.65%), Postives = 98/199 (49.25%), Query Frame = 1 Query: 298 IEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKS------------PKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSGEEIGTYVENL*QVNF 858 I ++++ + VL+ C G ++P FC+H L G+CR C V++ + + V SC P + M I ++ R+ ++E L++NHP DCP+C++GG C LQD ++ R+ KR+ ++ LGP + M RCI C RCVR+ + AG DLG+ G G + + Q F Sbjct: 3 IPIYIEEKKYMVEDTKNVLEVCLSLGFNVPYFCWHPALGSIGSCRQCAVKLYDNLHCVPDSKHINFGRLVMSCMTPVIKDMYISLFDKELQEFRKNILELLMVNHPHDCPVCEEGGNCHLQDMAVMVEHTYRRYRFTKRTHYNQYLGPFITHEMNRCITCYRCVRYYKDYAGGNDLGVFGVHDNIYFGRVQDGILQSEF 201 HSP 2 Score: 30.4166 bits (67), Expect = 1.063e-28 Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 3 Query: 840 LMTSELSGNVIDICPVGALTFK 905 ++ SE SGN+++ICP G T K Sbjct: 196 ILQSEFSGNLVEICPTGVFTDK 217
BLAST of FC878449 vs. ExPASy Swiss-Prot
Match: HOXU_RALEH (NAD-reducing hydrogenase hoxS subunit gamma OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=hoxU PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 1.081e-12 Identity = 45/160 (28.12%), Postives = 70/160 (43.75%), Query Frame = 1 Query: 295 AIEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVA 774 +I++ +DG L +G T++ GV IP CY G CR+C V+V + A+C + G+ ++ + P R+ ++EFL +CP C++ G C LQ RF V + + RCI C RCV F + A Sbjct: 2 SIQITIDGKTLTTEEGRTLVDVAAENGVYIPTLCYLKDKPCLGTCRVCSVKV--NGNVAAACTVRVSKGLNVEVNDPELVDMRKALVEFLFAEGNHNCPSCEKSGRCQLQAVGYEVDMMVSRFPYRFPVRVVDHASEKIWLERDRCIFCQRCVEFIRDKA 159
BLAST of FC878449 vs. ExPASy Swiss-Prot
Match: FDHL_BACSU (Putative formate dehydrogenase yrhE OS=Bacillus subtilis GN=yrhE PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.479e-11 Identity = 48/158 (30.38%), Postives = 72/158 (45.57%), Query Frame = 1 Query: 295 AIEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICD-QGGECDLQDQSMAFGSDRGRF----TEMKRSVVDKNLGPLVKTVMTRCIQCTRCV 753 +I V VDG ++ G T+L G++ P+ C+ + C C+VE + K V SCA A GM I K+A+ M+ LL NH L C +CD G C L + + G + ++ E VD + P + +CI C +CV Sbjct: 6 SISVRVDGTEIQARAGATILDILNENGIEYPQICHVPEVDPIQTCDTCIVEA--NGKLVRSCATVAENGMSIDLSGNRVKEAQTEAMDRLLENHLLYCTVCDNNNGNCTLHNTAEMMGIEHQKYPYTPKEDPSCAVDMS-HPFYRYDPNQCIACGQCV 160 The following BLAST results are available for this feature:
BLAST of FC878449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878449 ID=FC878449; Name=FC878449; organism=Citrus clementina; type=EST; length=926bpback to top |