FC878452

Overview
NameFC878452
Unique NameFC878452
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length879
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC878452 vs. ExPASy Swiss-Prot
Match: 1433_ENCCU (14-3-3 protein homolog OS=Encephalitozoon cuniculi GN=ECU03_1010 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.507e-21
Identity = 61/158 (38.61%), Postives = 88/158 (55.70%), Query Frame = 1 
Query:   64 EENVYMAKLAEQAERYEEMVQYMEKVVASASTGEE-LTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQ---KLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSA 525
            EE +  A L++ AERY++M + M   V  A   +  L V  RNL SVAYKN++ +RR+SWR++ S  QK E + +   V VI E    +E EL   C  +L ++      L  A    +  +F+LKMKGDY+RY AE  TG E    +++   +YK A
Sbjct:    7 EEALQKANLSDMAERYDDMAKEMRLAVTLAHEDKHILNVMARNLFSVAYKNLVSSRRSSWRMLCSERQKLEGK-DPSVVHVINEKIKVVEEELLRFCDEVLDIITTYILSLEEAQKNIEYNIFFLKMKGDYYRYKAEVVTGPEHSEVSKHAAESYKEA 163
The following BLAST results are available for this feature:
BLAST of FC878452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
1433_ENCCU4.507e-2138.6114-3-3 protein homolog OS=Encephalitozoon cuniculi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ5YP04RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ5YP04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878452 ID=FC878452; Name=FC878452; organism=Citrus clementina; type=EST; length=879bp
AAGAAAACCGAAAGAAAGAAACAAACACAACTGAACGGAACAATGGCAGC
CCCTTCTCCACGGGAAGAAAACGTATACATGGCGAAACTTGCGGAGCAAG
CCGAGCGGTACGAGGAGATGGTCCAATACATGGAAAAAGTCGTCGCCTCC
GCCTCAACCGGCGAGGAACTCACCGTCGAGGAGCGCAACCTCCTCTCCGT
CGCCTACAAGAACGTCATCGGCGCACGCCGCGCCTCCTGGCGCATCGTGT
CCTCCATCGAGCAGAAGGAGGAGTCGCGAGGCAACCAGGACCATGTCTCC
GTGATTAAGGAGTACAGATCGAAGATCGAGGCCGAGTTGACGGAGATCTG
TGGCGGGATCTTGAAATTATTGGACCAGAAATTGGTTCCCGCCGCTGCCG
CTGCCGATTCCAAGGTGTTTTATTTGAAGATGAAGGGAGATTATCATAGG
TACTTGGCCGAGTTTAAGACTGGCGATGAGAGGAAAGTCGCCGCTGAGAA
TACTCTTAATGCCTATAAATCTGCTCAGGTTTAATCTATTTGCACTGCGT
TTATTTATTTTTTTATTACTTTGAAATGTGGAGTATTTGTTGTTTTGTGT
TTTAAAATTATTTTAGATGCTGCATTATTCATTTTCTTAAGGCATGTTTG
ATCTAAAATTTTGTTTGATTAGGATGGGCTTGTATACTGTGACTAAGCAA
AAAGGATCAGAAATGAATGCTAATAAGGCTCTGTTAAGAGTTTCGTTTAT
GCAGCAATAAGCATTCATCTTATTATTGAAATTACTGATGGCTCATCACT
AAATGCAGGATCCTAATAACTTCATTTCTTTCCTCCAATTTTTTTGTGCT
CTATTTACAATTCTATCATGTGCGGTTTG
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