FC878462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878462 vs. ExPASy Swiss-Prot
Match: WRK36_ARATH (Probable WRKY transcription factor 36 OS=Arabidopsis thaliana GN=WRKY36 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.220e-18 Identity = 58/160 (36.25%), Postives = 84/160 (52.50%), Query Frame = 3 Query: 468 STDEESCKKPREEHIKA--KISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQ-SVLVATYEGEHNHPLPCQ---MDAASGSTSRCVTAGSVPCSTG----------------------QTITLDLTRSN 863 S E+ + EEH + K +RV + D + + DG QWRKYGQK + NP PRAY++CS + +CPV+K+VQR E++ S + TYEG H+HPLP + M A + + + + +GS S+ T+TLDLTR N Sbjct: 168 SVRNENHQDVLEEHEQTGLKKTRVCVKASCEDPS---INDGCQWRKYGQKTAKTNPLPRAYYRCSMSSNCPVRKQVQRCGEEETSAFMTTYEGNHDHPLPMEASHMAAGTSAAASLLQSGSSSSSSSTSASLSYFFPFHHFSISTTNSHPTVTLDLTRPN 324
BLAST of FC878462 vs. ExPASy Swiss-Prot
Match: WRKY8_ARATH (Probable WRKY transcription factor 8 OS=Arabidopsis thaliana GN=WRKY8 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.057e-18 Identity = 51/140 (36.43%), Postives = 81/140 (57.86%), Query Frame = 3 Query: 459 ESSSTDEESCK--KPREEHIKAKISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAA--SGSTSRCVTAGSVPCSTGQTITLDLTRSNN 866 + D+ S K K +++ K K RV + T+ T ++DGY+WRKYGQK +++P PR+Y++C+ C VKK+V+RS +D +V++ TYE +HNHP+P A SG+T+ S P + I + SN+ Sbjct: 145 DGGEDDQRSQKVVKTKKKEEKKKEPRVSFMTK---TEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCT-TQKCNVKKRVERSYQDPTVVITTYESQHNHPIPTNRRTAMFSGTTASDYNPSSSPIFSDLIINTPRSFSND 280
BLAST of FC878462 vs. ExPASy Swiss-Prot
Match: WRK28_ARATH (Probable WRKY transcription factor 28 OS=Arabidopsis thaliana GN=WRKY28 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.033e-17 Identity = 51/133 (38.35%), Postives = 78/133 (58.65%), Query Frame = 3 Query: 453 NSESSSTD---EESCKKPREEHI------------KAKISRVHYRTEPSD---TTSLV--VKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAASGSTS 791 NS SS D E+S K R+ + K K + V + EP T S V ++DGY+WRKYGQK +++P PR+Y++C+ C VKK+V+RS +D +V++ TYEG+HNHP+P + +S + + Sbjct: 111 NSSSSEADHPGEDSGKSRRKRELVGEEDQISKKVGKTKKTEVKKQREPRVSFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCT-TQKCNVKKRVERSFQDPTVVITTYEGQHNHPIPTNLRGSSAAAA 242
BLAST of FC878462 vs. ExPASy Swiss-Prot
Match: WRK56_ARATH (Probable WRKY transcription factor 56 OS=Arabidopsis thaliana GN=WRKY56 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.762e-17 Identity = 44/111 (39.64%), Postives = 70/111 (63.06%), Query Frame = 3 Query: 447 MGNSESSSTDEESCKKPREEHIKAKISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAAS 779 + N+ ++S ++C K + + A + R+ + T D V+ DGY+WRKYGQK ++N PR+Y++C++ +C VKK+VQR +D +V+V TYEG HNHP M+ S Sbjct: 75 VSNNSNNSDHNKNCNKGKGKRTLA-MQRIAFHTRSDDD---VLDDGYRWRKYGQKSVKNNAHPRSYYRCTY-HTCNVKKQVQRLAKDPNVVVTTYEGVHNHPCEKLMETLS 180
BLAST of FC878462 vs. ExPASy Swiss-Prot
Match: WRKY2_ARATH (Probable WRKY transcription factor 2 OS=Arabidopsis thaliana GN=WRKY2 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.006e-17 Identity = 48/117 (41.03%), Postives = 69/117 (58.97%), Query Frame = 3 Query: 450 GNSESSSTDEESCKKPREEHIKAKIS-RVHYRTEPS---DTTSLV--VKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAASG 782 G DE K+ + E A++S EP TTS V + DGY+WRKYGQKV + NP+PR+Y+KC+ AP C V+K V+R+ D ++ TYEG+HNH +P +++ G Sbjct: 439 GGGGGGEGDESESKRRKLEAFAAEMSGSTRAIREPRVVVQTTSDVDILDDGYRWRKYGQKVVKGNPNPRSYYKCT-APGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARNSSHG 554
BLAST of FC878462 vs. ExPASy Swiss-Prot
Match: WRK75_ARATH (Probable WRKY transcription factor 75 OS=Arabidopsis thaliana GN=WRKY75 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.006e-17 Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 3 Query: 441 LTMGNSESSSTDEESCKKPREEHIK-AKISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPL 755 L G ESS E C K E K K R ++T ++ DGY+WRKYGQK ++N PR+Y++C++ C VKK+VQR DQ V+V TYEG H+HP+ Sbjct: 24 LHQGEEESSKVRSEGCSKSVESSKKKGKKQRYAFQTRSQVD---ILDDGYRWRKYGQKAVKNNKFPRSYYRCTYG-GCNVKKQVQRLTVDQEVVVTTYEGVHSHPI 125
BLAST of FC878462 vs. ExPASy Swiss-Prot
Match: WRK71_ARATH (Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.926e-17 Identity = 46/103 (44.66%), Postives = 69/103 (66.99%), Query Frame = 3 Query: 450 GNSESSSTDEESCKKPREEHIKAKISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLP 758 G ESS + KK E+ K + RV + T+ S+ L +DGY+WRKYGQK +++P PR+Y++C+ C VKK+V+RS +D S+++ TYEG+HNHP+P Sbjct: 99 GVGESSKQLTKQGKKKGEK--KEREVRVAFMTK-SEIDHL--EDGYRWRKYGQKAVKNSPYPRSYYRCT-TQKCNVKKRVERSFQDPSIVITTYEGKHNHPIP 195
BLAST of FC878462 vs. ExPASy Swiss-Prot
Match: WRKY4_ARATH (Probable WRKY transcription factor 4 OS=Arabidopsis thaliana GN=WRKY4 PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 8.746e-17 Identity = 50/127 (39.37%), Postives = 74/127 (58.27%), Query Frame = 3 Query: 447 MGNSESSSTD-EESCKKPREEHIKAKISR----VHYRT--EPS---DTTSLV--VKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAASGSTS 791 +GN E+ + +E+ P+ + +IS +RT EP TTS V + DGY+WRKYGQKV + NP PR+Y+KC+ P C V+K V+R+ D +V TYEG+HNH LP ++ + + Sbjct: 354 VGNGETDVREKDENEPDPKRRSTEVRISEPAPAASHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCT-TPGCGVRKHVERAATDPKAVVTTYEGKHNHDLPAAKSSSHAAAA 479 HSP 2 Score: 75.485 bits (184), Expect = 4.492e-13 Identity = 40/119 (33.61%), Postives = 64/119 (53.78%), Query Frame = 3 Query: 522 ISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAASGSTSRCVTAGSVPCSTGQTITLDLTRSNNKSSN 878 ++ + +R++ DGY WRKYGQK + + PR+Y+KC+ P CPVKKKV+RS++ Q V Y+G+HNH P + + + S+ + G + L ++ SSN Sbjct: 211 VTIIEHRSQQPLNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCT-NPGCPVKKKVERSLDGQ-VTEIIYKGQHNHEPPQNTKRGNKDNTANINGSSINNNRGSS-ELGASQFQTNSSN 326
BLAST of FC878462 vs. ExPASy Swiss-Prot
Match: WRK58_ARATH (Probable WRKY transcription factor 58 OS=Arabidopsis thaliana GN=WRKY58 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.142e-16 Identity = 35/77 (45.45%), Postives = 54/77 (70.13%), Query Frame = 3 Query: 570 VVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAASGSTSRCV 800 ++ DGY+WRKYGQKV + NP PR+Y+KC+ P+C V+K V+R+ D ++ TYEG+HNH +P + + +T+ V Sbjct: 304 LLDDGYRWRKYGQKVVKGNPHPRSYYKCT-TPNCTVRKHVERASTDAKAVITTYEGKHNHDVPAARNGTAAATAAAV 379
BLAST of FC878462 vs. ExPASy Swiss-Prot
Match: WRK35_ARATH (Probable WRKY transcription factor 35 OS=Arabidopsis thaliana GN=WRKY35 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.142e-16 Identity = 52/150 (34.67%), Postives = 76/150 (50.67%), Query Frame = 3 Query: 453 NSESSSTDEESCKKPREEHIKAKIS---RVHYRTEPSDTTS-----LVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAASGSTSRCVTAGSVPCSTGQTITLDLTRSNNKSSN 878 N+ SS + + PR IK + S +V P+ S +V D + WRKYGQK + +P PR Y++CS + C +K+V+RS D ++LV TY EHNHP P Q +A +GST ++ P S T + S+ N Sbjct: 166 NNTSSCSQVQISSSPRNLGIKRRKSQAKKVVCIPAPAAMNSRSSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSSSSSSLNPSSKSSTAAATTSPSSRVFQN 315 The following BLAST results are available for this feature:
BLAST of FC878462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878462 ID=FC878462; Name=FC878462; organism=Citrus clementina; type=EST; length=880bpback to top |