FC878474

Overview
NameFC878474
Unique NameFC878474
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length790
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878474 vs. ExPASy Swiss-Prot
Match: INVX_SCHPO (Putative invertase OS=Schizosaccharomyces pombe GN=SPAC8E11.01c PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.053e-15
Identity = 60/207 (28.99%), Postives = 94/207 (45.41%), Query Frame = 1
Query:   91 GPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSA-------------------TILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGS 654
            G ++  G +HLF+Q+NP     GN  WGHAVS +L  W  LP A+ P    D   +++GSA                   ++ P+ +IV++YT   D   + QN+AY  D      + ++KY  NP+L     I    FRDP   W      W + +   + +    L Y + + + +  L E+  A      +EC DF  + I G+
Sbjct:   21 GLVYSNGKWHLFFQWNPTGNQAGNQHWGHAVSKNLYKWKLLPTALAPGD--DHGLMFSGSAVIDKTNSSGFFESGFFSRKSVDPEERIVLIYTTHYDNR-ETQNIAYSLDGG----ITFIKYKKNPIL----DIKESQFRDPKVFWHEESRAWIMVV--VLAQKYKVLFYHSLNLRDWVKLSEFGSAGVLGYQYECPDFVRLPIEGT 214          
BLAST of FC878474 vs. ExPASy Swiss-Prot
Match: INV_DEBHA (Invertase OS=Debaryomyces hansenii GN=INV PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15
Identity = 57/194 (29.38%), Postives = 89/194 (45.88%), Query Frame = 1
Query:  115 YHLFYQYNPDSAVWGN-ITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGS-------------ATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGS 654
            +H +YQYNP+  +WG  + WGH+ S DL HW    +A+ P    D  G+++GS              +I  D ++V +YT S     Q Q++AY  D  +     + KY  NPV+     +    FRDP   W     KW + + SK  +  I  ++ + D KT++L   +     G   +EC     V I  +
Sbjct:   62 WHAYYQYNPNDTIWGQPLYWGHSSSKDLTHWEEHQVALGPQN--DDEGIFSGSIVIDYNNTSGFFDESIDKDQRVVAIYTNSI-PDTQTQDIAYSLDGGE----TFTKYKKNPVI----DVNSTQFRDPKVFWHEETNKWIMVV-SKSQEYKIQ-IFGSLDLKTWDLHSNFTSGYLG-NQYECPGLIKVPIENT 241          
BLAST of FC878474 vs. ExPASy Swiss-Prot
Match: INU2_ASPFI (Inulinase OS=Aspergillus ficuum GN=inu2 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.913e-15
Identity = 56/181 (30.94%), Postives = 81/181 (44.75%), Query Frame = 1
Query:   25 SQMCRNTFSLGYHLCDENSMIAGP---LFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGV--WTGSATILPDG----------QIVMLYTG-STDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVL-----VPPRHIGPKDFRDPTTAWAGPDGKWRLTI 504
            SQ   N +   YH   +   +  P   +     +HLF+Q+NP + VWGNI WGHA S DL+HW + P A+      D NGV  +TG+A   P+             +  +TG +T    Q Q LA+  D        W K+ GNP++      P    G  + RDP   +    G W + +
Sbjct:   21 SQAQSNDYRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWGNICWGHATSTDLMHWAHKPTAIA-----DENGVEAFTGTAYYDPNNTSGLGDSANPPYLAWFTGYTTSSQTQDQRLAFSVDNG----ATWTKFQGNPIISTSQEAPHDITGGLESRDPKVFFHRQSGNWIMVL 192          
BLAST of FC878474 vs. ExPASy Swiss-Prot
Match: LEVB_BACST (Levanbiose-producing levanase (Fragment) OS=Bacillus stearothermophilus GN=levB PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.179e-14
Identity = 57/190 (30.00%), Postives = 78/190 (41.05%), Query Frame = 1
Query:   94 PLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQ--------IVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTI--GSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFY 633
            P+++ G YH +Y YN          W H VS DL+HW    +A +P        +WTGS  +  +          + ++   S     Q Q L Y  D           Y GNPV+  P   G  DFRDP   W   D KW + +  GSKIG       Y++ + K +     +      TGM EC D Y
Sbjct:    5 PIYFNGKYHYYYLYNRGYPKGNGTEWRHYVSDDLVHWTDEGVA-IPKYTNPDGDIWTGSVVVDKENTAGFGKNALVAIVTQPSAKDKKQEQYLWYSTDKGKSFKF----YSGNPVMPNP---GTDDFRDPKVIWDDQDNKWVMVMAEGSKIG------FYESDNLKDWHYTSGFF--PEQTGMVECPDLY 178          
BLAST of FC878474 vs. ExPASy Swiss-Prot
Match: SCRB_SALTY (Sucrose-6-phosphate hydrolase OS=Salmonella typhimurium GN=scrB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.011e-14
Identity = 61/190 (32.11%), Postives = 95/190 (50.00%), Query Frame = 1
Query:   91 GPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVL-VPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK-IGKTGISLVYQTTDFKTYELLDEYL-HAVPGTG----MWECVDFYPV 639
            G + + G YHLFYQ+NP +       W H  S DL+HW + PIA++PD+ YD NG ++GSA +  +G + + YTG+  K  +    A+    ++    D       PVL +P  + G    RDP   W   D  W + +G++   K G  L++ + D   +  + E   H + G      MWEC D +P+
Sbjct:   44 GFIEFAGRYHLFYQWNPLACDHTFKCWAHWSSIDLLHWQHEPIALMPDEEYDRNGCYSGSA-VDNNGTLTLCYTGNV-KFAEGGRTAWQCLATEN--ADGTFRKIGPVLPLPEGYTG--HVRDP-KVWRHED-LWYMVLGAQDRQKRGKVLLFSSADLHQWTSMGEIAGHGINGLDDVGYMWECPDLFPL 225          
BLAST of FC878474 vs. ExPASy Swiss-Prot
Match: INV4_YEAST (Invertase 4 OS=Saccharomyces cerevisiae GN=SUC4 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.643e-14
Identity = 54/170 (31.76%), Postives = 85/170 (50.00%), Query Frame = 1
Query:  106 KGWYHLFYQYNPDSAVWG-NITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSA-------------TILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYEL 573
            +G +HL++QYNP+  VWG  + WGHA S DL HW   P+A+ P +  + +G ++GS              T+ P  + V ++T +T +S + Q ++Y  D        + +Y  NPVL          FRDP   W  P  KW +T  +K     I  +Y + D K+++L
Sbjct:   52 EGKWHLYFQYNPNDTVWGLPLFWGHATSNDLTHWQDEPVAIAPKR--NDSGAYSGSMVIDHNNTSEFFNDTVDPRQRCVAIWTYNTPES-EEQYISYSLDGG----YTFTEYQKNPVLA----ANSTQFRDPKVFWYEPSQKWIMT-AAKSQDYKIE-IYSSDDLKSWKL 208          
BLAST of FC878474 vs. ExPASy Swiss-Prot
Match: INV1_YEAST (Invertase 1 OS=Saccharomyces cerevisiae GN=SUC1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.982e-14
Identity = 55/170 (32.35%), Postives = 84/170 (49.41%), Query Frame = 1
Query:  106 KGWYHLFYQYNPDSAVWG-NITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSA-------------TILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYEL 573
            +G +HL++QYNP+  VWG  + WGHA S DL HW   P+A+ P +    +G ++GS              TI P  + V ++T +T +S + Q ++Y  D        + +Y  NPVL          FRDP   W  P  KW +T  +K     I  +Y + D K+++L
Sbjct:   52 EGKWHLYFQYNPNDTVWGLPLFWGHATSDDLTHWQDEPVAIAPKR--KDSGAYSGSMVIDYNNTSGFFNDTIDPRQRCVAIWTYNTPES-EEQYISYSLDGG----YTFTEYQKNPVLA----ANSTQFRDPKVFWYEPSKKWIMT-AAKSQDYKIE-IYSSDDLKSWKL 208          
BLAST of FC878474 vs. ExPASy Swiss-Prot
Match: SCRB2_VIBCH (Probable sucrose-6-phosphate hydrolase OS=Vibrio cholerae PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.304e-13
Identity = 52/197 (26.40%), Postives = 91/197 (46.19%), Query Frame = 1
Query:   58 YHLCDENSMIAGP---LFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK-IGKTGISLVYQTTDFKTYELLDEYLHAVPGTG-MWECVDFY 633
            +H+     ++  P   ++++G YHLFYQ++P      +  W H  S DL+HW +  +A+ P  W+D +GV++G A +     + + YTG+T   V  Q              ++ K  G  +   P  +  +  RDP   +    GKW + +G++ +   G   VY + D   +     Y   +   G MWEC D++
Sbjct:   97 WHISPPQGLLNDPNGFIYHQGEYHLFYQWHPFVCEHKDKYWVHLKSLDLVHWQWQSVALTPSDWFDSHGVFSGHA-VSHQQDLWLFYTGNTRLGVDRQRQTMQCAARMNANGEFEKL-GPVIRCLPEGV-TEHIRDPKVIYT--QGKWHMLLGAQTLAHQGRLAVYHSDDLLHWHFDKLYGDELGNYGYMWECPDWF 288          
BLAST of FC878474 vs. ExPASy Swiss-Prot
Match: SCRB_BACSU (Sucrose-6-phosphate hydrolase OS=Bacillus subtilis GN=sacA PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.904e-13
Identity = 60/208 (28.85%), Postives = 96/208 (46.15%), Query Frame = 1
Query:   91 GPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGST-DKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLD-EYLHAVPGTG---------MWECVDFYPVAINGSVGLDTSATG 681
            G +++KG YH+F+Q+ P     G   WGH  + D+++W    IA+ P  W+D NG ++GSA +  D ++ + YTG+  D+    +     A   D L  +     G    +P  +     FRDP   W   +G W + IG++      +L  Q   F +  L +  +L  + G G         MWEC D +  ++ GS  L  S  G
Sbjct:   46 GVIYWKGSYHVFFQWQPFQTGHGAKFWGHYTTQDVVNWKREEIALAPSDWFDKNGCYSGSA-VTKDDRLYLFYTGNVRDQDGNRETYQCLAVSDDGLSFE---KKGVVARLPEGYTA--HFRDP-KVWE-HEGTWYMVIGAQTE----NLKGQAVLFASDNLTEWRFLGPITGAGFNGLDDFGYMWECPDLF--SLQGSDVLIVSPQG 239          
BLAST of FC878474 vs. ExPASy Swiss-Prot
Match: INV_DEBOC (Invertase OS=Debaryomyces occidentalis GN=INV PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.954e-13
Identity = 52/157 (33.12%), Postives = 78/157 (49.68%), Query Frame = 1
Query:   61 HLCDENSMIAGP--LFY----KGWYHLFYQYNPDSAVWGN-ITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGS-------------ATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAW 471
            H   E   +  P  LFY    K W HL++QYNP++  WG  + WGHA S DL+HW    IA+ P+  +D  G+++GS             ++I P+ +IV +YT +    +Q Q++A+  D        + KY  NPV+     +    FRDP   W
Sbjct:   40 HFTPEKGWMNDPNGLFYDKTAKLW-HLYFQYNPNATAWGQPLYWGHATSNDLVHWDEHEIAIGPE--HDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNI-PDLQTQDIAFSLDGG----YTFTKYENNPVI----DVSSNQFRDPKVFW 184          
The following BLAST results are available for this feature:
BLAST of FC878474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
INVX_SCHPO4.053e-1528.99Putative invertase OS=Schizosaccharomyces pombe GN... [more]
INV_DEBHA5.293e-1529.38Invertase OS=Debaryomyces hansenii GN=INV PE=3 SV=... [more]
INU2_ASPFI6.913e-1530.94Inulinase OS=Aspergillus ficuum GN=inu2 PE=3 SV=1[more]
LEVB_BACST1.179e-1430.00Levanbiose-producing levanase (Fragment) OS=Bacill... [more]
SCRB_SALTY2.011e-1432.11Sucrose-6-phosphate hydrolase OS=Salmonella typhim... [more]
INV4_YEAST7.643e-1431.76Invertase 4 OS=Saccharomyces cerevisiae GN=SUC4 PE... [more]
INV1_YEAST9.982e-1432.35Invertase 1 OS=Saccharomyces cerevisiae GN=SUC1 PE... [more]
SCRB2_VIBCH1.304e-1326.40Probable sucrose-6-phosphate hydrolase OS=Vibrio c... [more]
SCRB_BACSU2.904e-1328.85Sucrose-6-phosphate hydrolase OS=Bacillus subtilis... [more]
INV_DEBOC4.954e-1333.12Invertase OS=Debaryomyces occidentalis GN=INV PE=3... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ5YP07RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ5YP07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878474 ID=FC878474; Name=FC878474; organism=Citrus clementina; type=EST; length=790bp
ATTGTTGGATAGCACGTGGTTAAATCTCAAATGTGTAGGAATACTTTTTC
TCTTGGCTACCATTTGTGTGACGAAAATTCTATGATTGCAGGTCCATTAT
TTTATAAGGGATGGTACCATCTGTTCTATCAATACAATCCTGATTCAGCT
GTATGGGGCAACATTACGTGGGGCCATGCTGTGTCAGCGGACCTGATTCA
CTGGCTCTATCTCCCAATTGCGATGGTCCCCGATCAGTGGTATGATATCA
ACGGTGTGTGGACGGGGTCCGCCACGATCCTTCCCGACGGCCAGATCGTA
ATGCTTTACACTGGGAGCACTGATAAATCAGTGCAGGTGCAAAATCTTGC
ATACCCGGCAGATCCCTCTGACCCTCTCCTCCTTGATTGGGTCAAGTACC
CGGGTAACCCGGTATTGGTGCCCCCACGTCACATTGGACCGAAAGACTTT
AGGGACCCAACAACTGCATGGGCCGGGCCTGACGGAAAATGGAGGCTCAC
AATTGGGTCAAAAATTGGTAAGACGGGTATTTCGCTTGTGTACCAAACGA
CCGACTTCAAAACTTACGAGCTTTTGGATGAGTATTTACATGCGGTTCCC
GGTACGGGTATGTGGGAATGTGTGGACTTTTACCCTGTTGCAATAAACGG
GTCAGTTGGTTTGGATACATCCGCCACTGGTCCGGGAATTAAGCATGTGT
TGAAGGCTAGTTTGGATGATACAAAGGTGGACCATTATGCAATCGGGACC
TATAACCCGGAGAACGACAAGTGGACACCCGATAACCCGG
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