FC878476

Overview
NameFC878476
Unique NameFC878476
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length867
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878476 vs. ExPASy Swiss-Prot
Match: APX1_ARATH (L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis thaliana GN=APX1 PE=1 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 4.988e-33
Identity = 77/169 (45.56%), Postives = 106/169 (62.72%), Query Frame = 3
Query:  300 LKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYR-MGLNDKEIVALSGAHTVGRSRPERSGW 803
            ++  R  +R L+    C PI+VRL WH AGT+D       R GG   ++RF+ E  H AN+G+  AL+L+ PI++++  +++AD  QLA   A+E  GGP IP   GR D   P   P EGRLP A      +HLR+VF + MGL+DK+IVALSGAHT+GR   +RSG+
Sbjct:   16 VEKCRRKLRGLIAEKNCAPIMVRLAWHSAGTFDCQ----SRTGGPFGTMRFDAEQAHGANSGIHIALRLLDPIREQFPTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQP---PPEGRLPDA--TKGCDHLRDVFAKQMGLSDKDIVALSGAHTLGRCHKDRSGF 175          
BLAST of FC878476 vs. ExPASy Swiss-Prot
Match: CCPR_MAGGR (Cytochrome c peroxidase, mitochondrial OS=Magnaporthe grisea GN=CCP1 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.508e-33
Identity = 78/156 (50.00%), Postives = 99/156 (63.46%), Query Frame = 3
Query:  354 PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPET 818
            P+LVRL WH +GTYDK        GG+N A++RF  E  H ANAGL  A   ++PIK KY  +TY+DL+ L    AI+E  GPKIP + GR D      C  +GRLP A      +H+RN+FYRMG ND+EIVAL+GAH +GR   +RSG+  P T
Sbjct:  113 PVLVRLAWHASGTYDKETGT----GGSNGATMRFSPEGGHGANAGLKAARDFLEPIKAKYPWITYSDLWILGGVCAIQEMLGPKIPYRPGRSD-KDAAACTPDGRLPDAA--QRQDHVRNIFYRMGFNDQEIVALAGAHALGRCHTDRSGFDGPWT 261          
BLAST of FC878476 vs. ExPASy Swiss-Prot
Match: CCPR_GIBZE (Cytochrome c peroxidase, mitochondrial OS=Gibberella zeae GN=CCP1 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.111e-32
Identity = 80/158 (50.63%), Postives = 101/158 (63.92%), Query Frame = 3
Query:  354 PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRV--DVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPET 818
            P+LVRL WH +GTYDK        GG+N A++RF  E  H ANAGL  A   +QP+K+K+  +TY+DL+ LA   AI+E  GP IP + GR   DVSG   C  +GRLP A      +HLR +F RMG ND+EIVALSGAH +GR   +RSG+  P T
Sbjct:  108 PVLVRLAWHASGTYDKETGT----GGSNGATMRFAPESDHGANAGLAAARDFLQPVKEKFPWITYSDLWILAGVCAIQEMLGPAIPYRPGRSDRDVSG---CTPDGRLPDAS--KRQDHLRGIFGRMGFNDQEIVALSGAHALGRCHTDRSGYSGPWT 256          
BLAST of FC878476 vs. ExPASy Swiss-Prot
Match: APX2_ORYSJ (L-ascorbate peroxidase 2, cytosolic OS=Oryza sativa subsp. japonica GN=APX2 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.111e-32
Identity = 83/188 (44.15%), Postives = 114/188 (60.64%), Query Frame = 3
Query:  243 NRGYSTVATTKCAASDPDQLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVF-YRMGLNDKEIVALSGAHTVGRSRPERSGW 803
            ++ Y TV+    AA     +  A+  +R L+    C P+++RL WH AGT+D +     R GG   +++   E  HAANAGL  A++L+ PIKD+   ++YAD +QLA   A+E  GGP++P   GR D   P   P EGRLP A   S  +HLR VF  +MGL+DK+IVALSG HT+GR   ERSG+
Sbjct:    3 SKSYPTVSDEYLAA-----VGKAKRKLRGLIAEKNCAPLMLRLAWHSAGTFDVS----SRTGGPFGTMKNPGEQSHAANAGLDIAVRLLDPIKDQLPILSYADFYQLAGVVAVEVTGGPEVPFHPGRQDKPEP---PPEGRLPDATQGS--DHLRQVFSAQMGLSDKDIVALSGGHTLGRCHKERSGF 176          
BLAST of FC878476 vs. ExPASy Swiss-Prot
Match: CCPR_NEUCR (Cytochrome c peroxidase, mitochondrial OS=Neurospora crassa GN=ccp-1 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.451e-32
Identity = 77/156 (49.36%), Postives = 99/156 (63.46%), Query Frame = 3
Query:  354 PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPET 818
            P+LVRL WH +GTYDK        GG+N A++RF  E  H ANAGL  A   ++P+K K+  +TY+DL+ L    AI+E  GP+IP + GR D      C  +GRLP A      +HLRN+FYRMG ND+EIVALSGAH +GR   +RSG+  P T
Sbjct:  111 PVLVRLAWHASGTYDKETGT----GGSNGATMRFAPESDHGANAGLKAARDFLEPVKAKFPWITYSDLWILGGVCAIQEMLGPQIPYRPGRQD-RDAAGCTPDGRLPDAS--QAQDHLRNIFYRMGFNDQEIVALSGAHALGRCHADRSGFDGPWT 259          
BLAST of FC878476 vs. ExPASy Swiss-Prot
Match: APX1_PEA (L-ascorbate peroxidase, cytosolic OS=Pisum sativum GN=APX1 PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.451e-32
Identity = 75/174 (43.10%), Postives = 110/174 (63.22%), Query Frame = 3
Query:  300 LKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYR-MGLNDKEIVALSGAHTVGRSRPERSGWGKPET 818
            ++ A+  +R  +    C P+++RL WH AGT+D       + GG   +++ + EL H AN GL  A++L++PIK+++  V+YAD +QLA   A+E  GGP++P   GR D   P   P EGRLP A   S  +HLR+VF + MGL+D++IVALSG HT+G +  ERSG+  P T
Sbjct:   16 IEKAKRKLRGFIAEKKCAPLILRLAWHSAGTFDSKT----KTGGPFGTIKHQAELAHGANNGLDIAVRLLEPIKEQFPIVSYADFYQLAGVVAVEITGGPEVPFHPGREDKPEP---PPEGRLPDATKGS--DHLRDVFGKAMGLSDQDIVALSGGHTIGAAHKERSGFEGPWT 180          
BLAST of FC878476 vs. ExPASy Swiss-Prot
Match: CCPR2_GIBZE (Putative heme-binding peroxidase OS=Gibberella zeae GN=FG10606 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.475e-32
Identity = 84/209 (40.19%), Postives = 114/209 (54.55%), Query Frame = 3
Query:  270 TKCAASDPDQLKSAREDIRELLKST-----FCHPILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKDGPGAPGGQSWT 866
            +K   S P    + ++ I +LL           P+LVRL WH +GTYDK  +     GG+N A +R+E E    ANAGL NA   ++P+K  +  +TY+DL+ LA  TAI   GGP+I    GR D     + P  GRLP A     AEH+R++FYRMG ND+EIVALSGAH +GR     SG    W    T+++         ++WT
Sbjct:    9 SKGQESTPGDFAAVQKSIIDLLNQPDYDDGSAGPVLVRLAWHSSGTYDKVTDT----GGSNGAGMRYEAEGGDPANAGLQNARVFLEPVKRLHPWITYSDLWTLAGVTAIHAMGGPEIDWLPGRTDFVDDSKLPPRGRLPDAA--QGAEHIRHIFYRMGFNDREIVALSGAHNLGRCHTANSGFEGKWVNNPTRFSNQYFRLLLSETWT 211          
BLAST of FC878476 vs. ExPASy Swiss-Prot
Match: CCPR2_USTMA (Putative heme-binding peroxidase OS=Ustilago maydis GN=CCP2 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.222e-32
Identity = 76/154 (49.35%), Postives = 97/154 (62.99%), Query Frame = 3
Query:  354 PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKP 812
            P+LVRL WH +GTY    +     GG+N A +R+E E    ANAGL +A   ++PIK+K+S +TYADL+ LA   AIE  GGP I  K GR D +   + P  GRLP       A+HLR +F RMG ND+EIVALSGAH +GR   +RSG+  P
Sbjct:   30 PVLVRLAWHASGTYCARTDT----GGSNGAGMRYEAEGGDPANAGLQHARVFLEPIKEKHSWITYADLWTLAGVVAIEAMGGPSIQWKPGRTDFADDSRLPPRGRLPDGA--QGADHLRFIFNRMGFNDQEIVALSGAHNLGRCHSDRSGFEGP 177          
BLAST of FC878476 vs. ExPASy Swiss-Prot
Match: CCPR_YARLI (Cytochrome c peroxidase, mitochondrial OS=Yarrowia lipolytica GN=CCP1 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.737e-31
Identity = 75/165 (45.45%), Postives = 101/165 (61.21%), Query Frame = 3
Query:  354 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQC-PEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKD 833
            P+L+RL WH +GTY+K+  ++   GG   ++RF+ E  HAAN GLVNA   ++PI +K+  ++  DL+ L   TA++E GGP IP K GRVD   PE   P +G LP A     A H+RNVF R G ND+E+VAL GAH +GR   + SG    W    T +T D
Sbjct:   93 PVLLRLAWHSSGTYNKSDNKFGSSGG---TMRFKPEASHAANNGLVNARNFLKPIHEKFPWISTGDLYTLGGVTAVQELGGPIIPWKRGRVD--EPESASPPDGSLPDAS--QGATHVRNVFNRQGFNDQEMVALIGAHALGRCHKQNSGFEGPWTFSPTMFTND 250          
BLAST of FC878476 vs. ExPASy Swiss-Prot
Match: CCPR_EMENI (Cytochrome c peroxidase, mitochondrial OS=Emericella nidulans GN=ccp1 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.358e-30
Identity = 76/156 (48.72%), Postives = 100/156 (64.10%), Query Frame = 3
Query:  354 PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGR--VDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKP 812
            P+LVRL WH +GTYD         GG+N A++RF  E  H ANAGL  A   ++PIK K+  +TY+DL+ LA A AI+E GGP IP + GR   DVSG   C  +GRLP A      +H+R +F RMG +D+E+VAL GAH +GR+  +RSG+  P
Sbjct:  114 PVLVRLAWHASGTYDAETGT----GGSNGATMRFAPESDHGANAGLKYARDFLEPIKAKFPWITYSDLWTLAGACAIQELGGPDIPWRPGRQDKDVSG---CTPDGRLPDA--TKNQDHIRAIFGRMGFDDREMVALIGAHALGRAHTDRSGFDGP 260          
The following BLAST results are available for this feature:
BLAST of FC878476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
APX1_ARATH4.988e-3345.56L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis... [more]
CCPR_MAGGR8.508e-3350.00Cytochrome c peroxidase, mitochondrial OS=Magnapor... [more]
CCPR_GIBZE1.111e-3250.63Cytochrome c peroxidase, mitochondrial OS=Gibberel... [more]
APX2_ORYSJ1.111e-3244.15L-ascorbate peroxidase 2, cytosolic OS=Oryza sativ... [more]
CCPR_NEUCR1.451e-3249.36Cytochrome c peroxidase, mitochondrial OS=Neurospo... [more]
APX1_PEA1.451e-3243.10L-ascorbate peroxidase, cytosolic OS=Pisum sativum... [more]
CCPR2_GIBZE2.475e-3240.19Putative heme-binding peroxidase OS=Gibberella zea... [more]
CCPR2_USTMA4.222e-3249.35Putative heme-binding peroxidase OS=Ustilago maydi... [more]
CCPR_YARLI2.737e-3145.45Cytochrome c peroxidase, mitochondrial OS=Yarrowia... [more]
CCPR_EMENI1.358e-3048.72Cytochrome c peroxidase, mitochondrial OS=Emericel... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA56DA04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA56DA04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878476 ID=FC878476; Name=FC878476; organism=Citrus clementina; type=EST; length=867bp
CTCGGCCAGCGTCACTGACACAACAACAGATACGACTGCAATCAAAATCA
CAATCACCGATGGCTTCCTCTTTGAGCACCGCCGCTTCTTCTCGCCTTCT
TTGCTCCACCACCGCCGCCGCCGCCGCAGCTGCTAAGCTTTCTTTCTCTT
CCGCTTCTTCACTCTCTTTCTCTCTCTCCTCCTCTTCCTCCCTCAAATGC
CTCAGATTCTCTCCTCTCATCAGCCAGAGGAGATCGTCTGTGAACAGAGG
ATATAGCACCGTAGCTACGACGAAATGTGCGGCGTCGGATCCTGATCAGT
TGAAGAGTGCTAGAGAAGATATTAGGGAGCTTCTCAAGTCTACATTTTGC
CATCCTATTTTGGTTCGTCTAGGATGGCATGATGCTGGTACTTATGACAA
GAACATTGAGGAGTGGCCTCGAAGGGGAGGAGCTAATGCAAGTCTTAGAT
TTGAGGTTGAGCTAAAACACGCAGCCAATGCTGGGCTTGTGAATGCATTG
AAACTGATTCAACCTATCAAGGACAAATATTCCGGTGTCACATATGCTGA
CTTATTCCAGTTGGCTAGCGCTACTGCTATAGAGGAAGCCGGGGGTCCTA
AGATCCCAATGAAGTATGGAAGAGTGGATGTCTCAGGACCTGAGCAGTGC
CCTGAAGAAGGAAGGCTTCCCGCTGCTGGGCCTCCATCACCTGCTGAACA
TTTAAGAAATGTCTTTTATAGAATGGGATTAAATGACAAGGAAATAGTTG
CCTTATCTGGTGCACACACAGTGGGAAGGTCTAGACCTGAACGAAGTGGT
TGGGGCAAGCCAGAAACAAAGTACACGAAAGATGGACCAGGAGCACCTGG
TGGGCAGTCCTGGACGG
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