FC878476

Overview
NameFC878476
Unique NameFC878476
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length867
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878476 vs. ExPASy Swiss-Prot
Match: CCPR_CRYNV (Cytochrome c peroxidase, mitochondrial OS=Cryptococcus neoformans var. grubii GN=CCP1 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.502e-29
Identity = 72/156 (46.15%), Postives = 100/156 (64.10%), Query Frame = 3
Query:  354 PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPET 818
            P+L+RL WH +GTY K        GG+N A++RF+ E +H+AN GL  A + ++ IK ++  ++Y DL+ L    AI+E+GGP IP + GR+D    +  P +GRLP A      +HLR +F RMG ND+EIVALSGAH +GR  P RSG+  P T
Sbjct:  130 PVLLRLAWHASGTYSKA----DGTGGSNFATMRFKPEAEHSANNGLHVAREHMEKIKQEFPWISYGDLWTLGGVCAIQESGGPTIPWRPGRIDGYAAQVTP-DGRLPDA--TQAQDHLRFIFNRMGFNDQEIVALSGAHAMGRCHPNRSGFDGPWT 278          
BLAST of FC878476 vs. ExPASy Swiss-Prot
Match: CCPR_CRYNE (Cytochrome c peroxidase, mitochondrial OS=Cryptococcus neoformans GN=CCP1 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.453e-29
Identity = 70/156 (44.87%), Postives = 100/156 (64.10%), Query Frame = 3
Query:  354 PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPET 818
            P+L+RL WH +GTY+K        GG+N A++RF+ E +H+AN GL  A + ++ IK ++  ++Y DL+ L    A++E+GGP IP + GR+D    +  P +GRLP A      +HLR +F RMG ND+EIVALSGAH +GR    RSG+  P T
Sbjct:  130 PVLLRLAWHSSGTYNKE----DGTGGSNFATMRFKPEAEHSANNGLHVAREHMEKIKQEFPWISYGDLWTLGGVCAVQESGGPTIPWRPGRIDGFEAQVTP-DGRLPDAS--QAQDHLRFIFNRMGFNDQEIVALSGAHAMGRCHTNRSGFEGPWT 278          
BLAST of FC878476 vs. ExPASy Swiss-Prot
Match: CCPR3_YARLI (Putative heme-binding peroxidase OS=Yarrowia lipolytica GN=YALI0D25366g PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.660e-28
Identity = 70/156 (44.87%), Postives = 91/156 (58.33%), Query Frame = 3
Query:  354 PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPET 818
            P+L+RL WH   TYDK    + R GG+N A++R+ +E     N GL  A   ++PIK K+  +TYADL+ LA   +IE   GP I  + GRVD       P  GRLP  G    A H+R +F RMG ND+E VAL GAH++GR    RSG+  P T
Sbjct:   66 PLLIRLAWHSCATYDK----YTRTGGSNGATMRYHLEASDEGNVGLEVARLSLEPIKRKHPWITYADLWILAGVVSIEACKGPSIKWRDGRVDYEDDLLVPPNGRLPLGG--GDASHVRTIFSRMGFNDQETVALIGAHSLGRLHHHRSGFDGPWT 215          
BLAST of FC878476 vs. ExPASy Swiss-Prot
Match: CCPR2_DEBHA (Putative heme-binding peroxidase OS=Debaryomyces hansenii GN=DEHA2G12166g PE=3 SV=3)

HSP 1 Score: 125.561 bits (314), Expect = 3.699e-28
Identity = 74/195 (37.95%), Postives = 107/195 (54.87%), Query Frame = 3
Query:  267 TTKCAASDPDQLKSAREDIRELLKST-----FCHPILVRLGWHDAGTYDKNIEEWPRRGGANAS-LRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKD 833
            T   +  D + ++  +  I+++L           P+++RL WH   TY+K    +   GG+N S +RF  E+    N+GL  A   ++PIK K+  +TY+DL+ LA   +I+E GGPKIP + GRVD       P  GRLP A     A H+R  F RMG ND+E V+L GAH +GR     SGW   E K+T++
Sbjct:  146 TKSISVDDVEYVEKVKHAIKQVLPKPDYDDGSLGPVILRLAWHCCATYNK----FTGNGGSNGSTMRFVPEITDDGNSGLDIARSALEPIKQKFPDITYSDLWTLAGKISIQEMGGPKIPWRCGRVDCIDDRYVPPNGRLPFA--YKNANHIRETFGRMGFNDRETVSLLGAHGLGRCHKRFSGW---EGKWTEN 331          
BLAST of FC878476 vs. ExPASy Swiss-Prot
Match: CCPR_YEAST (Cytochrome c peroxidase, mitochondrial OS=Saccharomyces cerevisiae GN=CCP1 PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 1.076e-27
Identity = 65/164 (39.63%), Postives = 97/164 (59.15%), Query Frame = 3
Query:  354 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKD 833
            P+LVRL WH +GT+DK+       GG   + RF+ E    +NAGL N  K ++PI  ++  ++  DLF L   TA++E  GPKIP + GRVD +  +  P+ GRLP A     A+++R  F R+ +ND+E+VAL GAH +G++  + SG    WG     +T +
Sbjct:  111 PVLVRLAWHTSGTWDKHDNTGGSYGG---TYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVD-TPEDTTPDNGRLPDA--DKDADYVRTFFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNE 268          
BLAST of FC878476 vs. ExPASy Swiss-Prot
Match: CCPR_CANGA (Cytochrome c peroxidase, mitochondrial OS=Candida glabrata GN=CAGL0K08184g PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.131e-27
Identity = 63/164 (38.41%), Postives = 96/164 (58.54%), Query Frame = 3
Query:  354 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKD 833
            P+LVRL WH +GT+DKN       GG   + R++ E +  +NAGL NA K ++P+K ++  ++Y DL+ L     I+E  GPKIP + GR D+   +  P+ GRLP       A ++RN + R+  ND+E+VAL GAH +G++  + SG    WG     +T +
Sbjct:  108 PVLVRLAWHSSGTWDKNDNTGGSYGG---TYRYKKESQDPSNAGLENAAKFLEPVKKQFPWISYGDLYTLGGVVGIQELQGPKIPWRSGRTDLP-EDMTPDNGRLPDG--DKDANYVRNFYKRLDFNDREVVALLGAHALGKTHLKNSGFEGPWGAANNIFTNE 265          
BLAST of FC878476 vs. ExPASy Swiss-Prot
Match: CCPR_KLULA (Cytochrome c peroxidase, mitochondrial OS=Kluyveromyces lactis GN=CCP1 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.462e-26
Identity = 66/164 (40.24%), Postives = 95/164 (57.93%), Query Frame = 3
Query:  354 PILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKD 833
            P+LVRL WH AGT+D         GG   + RF +E    +N GL NA K ++PI +KY  +++ DL+ LA  TAI+E  GP IP + GRVD    +  PE GRLP A     A+++R  F+R+   D+++VAL GAH +G++  + SG    WG     +T +
Sbjct:   97 PVLVRLAWHCAGTWDAKDNTGGPYGG---TYRFAMETNDPSNNGLQNAAKFLEPIHEKYPWLSHGDLYSLAGVTAIQEMQGPTIPWRSGRVD-QPEDTTPENGRLPDAS--KDAKYVRCFFHRLNFEDRQVVALLGAHALGKTHLKNSGFEGPWGAATNIFTNE 254          
BLAST of FC878476 vs. ExPASy Swiss-Prot
Match: CCPR2_CANAL (Putative heme-binding peroxidase OS=Candida albicans GN=CCP2 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.522e-26
Identity = 70/160 (43.75%), Postives = 89/160 (55.62%), Query Frame = 3
Query:  354 PILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTK 830
            PI++RL WH   TYD         GG+N A++RF  E+    N GL  A   ++PIK +Y  ++YADL+ LA   AIE  GGP I  K GRVD +     P  G LP A     A H+R  F R+G ND++ VAL GAH VGR     SGW   E K+T+
Sbjct:   53 PIILRLAWHCCATYDVTTNT----GGSNGATMRFVPEITDEGNYGLDIARAALEPIKQRYPAISYADLWTLAGKVAIEYMGGPTIIWKSGRVDYTNDRCTPSNGLLPFA--DKDANHIRKTFTRLGYNDQQTVALIGAHGVGRCHKRFSGW---EGKWTR 203          
BLAST of FC878476 vs. ExPASy Swiss-Prot
Match: CCPR2_CRYNE (Putative heme-binding peroxidase OS=Cryptococcus neoformans GN=CNE03890 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.316e-25
Identity = 72/181 (39.78%), Postives = 103/181 (56.91%), Query Frame = 3
Query:  303 KSAREDIRELLKST-----FCHPILVRLGWHDAGTYDKNIEEWPRRGGAN-ASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPE-----EGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSGWGKP 812
            ++ +E+I++++K          P+LVRL WH +G    N       GG+N A +RF  E    ANAGL  A+  + P++   S +++ADL+ LA  TAIE  GGP+IP + GR+D    +   E       RLP       A H+R+VF RMG +D+EIVALSGAH +GR   +RSG+  P
Sbjct:   10 QALKEEIKKIMKQPGYDDGSAGPVLVRLAWHASG----NFSLVEHNGGSNGAGMRFPPESVDPANAGLHYAISFLLPLQSANSWISHADLWTLAGVTAIEAMGGPQIPWEPGRLDYESEQAAVEHRGDVSNRLPDGA--LGAAHIRDVFGRMGFSDQEIVALSGAHNLGRCHADRSGFDGP 184          
BLAST of FC878476 vs. ExPASy Swiss-Prot
Match: CCPR_DEBHA (Cytochrome c peroxidase, mitochondrial OS=Debaryomyces hansenii GN=CCP1 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.240e-24
Identity = 61/163 (37.42%), Postives = 89/163 (54.60%), Query Frame = 3
Query:  357 ILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAANAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDKEIVALSGAHTVGRSRPERSG----WGKPETKYTKD 833
            +L RL WH +GTY K        GG   ++ ++ E     N+GL +    +Q  KDKYS +++ DL+ L    A++E GGPKI  + GR D+S   + PE GRLP A     A++++ VF RMG N++E V L GAH +G+   E +     WG     +T D
Sbjct:  111 LLTRLAWHTSGTYKKEDNTGGSYGG---TMIYKPESTDGENSGLNHGRDFLQEFKDKYSWLSHGDLWTLGGVVAVQECGGPKIKWRPGRQDISDKTRVPENGRLPDAS--KDADYVKGVFGRMGFNERETVCLIGAHCLGKCHKENTNYDGPWGPSFNMFTND 268          
The following BLAST results are available for this feature:
BLAST of FC878476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
CCPR_CRYNV1.502e-2946.15Cytochrome c peroxidase, mitochondrial OS=Cryptoco... [more]
CCPR_CRYNE7.453e-2944.87Cytochrome c peroxidase, mitochondrial OS=Cryptoco... [more]
CCPR3_YARLI1.660e-2844.87Putative heme-binding peroxidase OS=Yarrowia lipol... [more]
CCPR2_DEBHA3.699e-2837.95Putative heme-binding peroxidase OS=Debaryomyces h... [more]
CCPR_YEAST1.076e-2739.63Cytochrome c peroxidase, mitochondrial OS=Saccharo... [more]
CCPR_CANGA3.131e-2738.41Cytochrome c peroxidase, mitochondrial OS=Candida ... [more]
CCPR_KLULA3.462e-2640.24Cytochrome c peroxidase, mitochondrial OS=Kluyvero... [more]
CCPR2_CANAL4.522e-2643.75Putative heme-binding peroxidase OS=Candida albica... [more]
CCPR2_CRYNE1.316e-2539.78Putative heme-binding peroxidase OS=Cryptococcus n... [more]
CCPR_DEBHA3.240e-2437.42Cytochrome c peroxidase, mitochondrial OS=Debaryom... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA56DA04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA56DA04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878476 ID=FC878476; Name=FC878476; organism=Citrus clementina; type=EST; length=867bp
CTCGGCCAGCGTCACTGACACAACAACAGATACGACTGCAATCAAAATCA
CAATCACCGATGGCTTCCTCTTTGAGCACCGCCGCTTCTTCTCGCCTTCT
TTGCTCCACCACCGCCGCCGCCGCCGCAGCTGCTAAGCTTTCTTTCTCTT
CCGCTTCTTCACTCTCTTTCTCTCTCTCCTCCTCTTCCTCCCTCAAATGC
CTCAGATTCTCTCCTCTCATCAGCCAGAGGAGATCGTCTGTGAACAGAGG
ATATAGCACCGTAGCTACGACGAAATGTGCGGCGTCGGATCCTGATCAGT
TGAAGAGTGCTAGAGAAGATATTAGGGAGCTTCTCAAGTCTACATTTTGC
CATCCTATTTTGGTTCGTCTAGGATGGCATGATGCTGGTACTTATGACAA
GAACATTGAGGAGTGGCCTCGAAGGGGAGGAGCTAATGCAAGTCTTAGAT
TTGAGGTTGAGCTAAAACACGCAGCCAATGCTGGGCTTGTGAATGCATTG
AAACTGATTCAACCTATCAAGGACAAATATTCCGGTGTCACATATGCTGA
CTTATTCCAGTTGGCTAGCGCTACTGCTATAGAGGAAGCCGGGGGTCCTA
AGATCCCAATGAAGTATGGAAGAGTGGATGTCTCAGGACCTGAGCAGTGC
CCTGAAGAAGGAAGGCTTCCCGCTGCTGGGCCTCCATCACCTGCTGAACA
TTTAAGAAATGTCTTTTATAGAATGGGATTAAATGACAAGGAAATAGTTG
CCTTATCTGGTGCACACACAGTGGGAAGGTCTAGACCTGAACGAAGTGGT
TGGGGCAAGCCAGAAACAAAGTACACGAAAGATGGACCAGGAGCACCTGG
TGGGCAGTCCTGGACGG
back to top