FC878505
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878505 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.889e-47 Identity = 103/256 (40.23%), Postives = 146/256 (57.03%), Query Frame = 3 Query: 123 LQYRVTHPVKDAYPLWLTSVICEIWFALSWLLDQFPKWYPVNRETYLDRLALRYDREGEPSQLAPVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSRYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGRSGGLDTDGNELPRLVYVSREKRPGFLHHKKAGAMNAL 890 L YR+ H V +W+ + +CE F WLL KW P + +TY +RL R +L PVD+FV+T DP++EPPL+ NTVLS+LAV+YP +K++ YVSDDG + LT+ +L E ++FA+ WVPFCKK+N+ RAP YF + + F K+ KREYE+ ++ + + E D + DH +++V GG+ D E+P +VY+SREKRP HH KAGAMN L Sbjct: 37 LLYRILH-VNQKDTVWIVAFLCETCFTFVWLLITNIKWSPADYKTYPERLDERVH------ELPPVDMFVTTADPVREPPLIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNVRVRAPFMYFRNSPEAAEGS---EFSKDWEMTKREYEKLSQKVEDATGSSHWLDAE----DDFEAFLNTKSNDHSTIVKVVWENKGGVG-DEKEVPHVVYISREKRPNHFHHYKAGAMNFL 277
BLAST of FC878505 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 5.079e-47 Identity = 109/262 (41.60%), Postives = 157/262 (59.92%), Query Frame = 3 Query: 123 LQYRVTH--PVKDAYPLWLTSVICEIWFALSWLLDQFPKWYPVNRETYLDRLALRYDREGEPSQLAPVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSRYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDG-TPWPGN-NPRDHPGMIQVFL-GRS-GGLDTDGNELPRLVYVSREKRPGFLHHKKAGAMNAL 890 L YR T + WL E+WFA+ W++ Q +W PV R T+ +RLA RY L VD+FV T DP EPP + +T+LS++A +YP +K+S Y+SDDG ++LTF AL E + FA+KW+PFC+++NIEPR+P YF++ + + P KE +K YEE + RI++ V K+PEE G W ++H ++QV + G+S +D DGN LP LVY++REK P + H+ KAGA+NAL Sbjct: 38 LYYRATRVPAAGEGRAAWLGMAAAELWFAVYWVITQSVRWCPVRRRTFKNRLAERYKEN-----LPGVDVFVCTADPHAEPPSLVISTILSVMAYNYPSEKISVYLSDDGGSILTFYALWEASMFAKKWLPFCRRYNIEPRSPAAYFSESEGH-HNLCSP---KEWSFIKNLYEEMRERIDSAVMSG-KIPEEIKLKHKGFDEWNSEMTSKNHQPIVQVLIDGKSQNAVDDDGNVLPTLVYMAREKSPQYHHNFKAGALNAL 289
BLAST of FC878505 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 3.292e-46 Identity = 99/242 (40.91%), Postives = 144/242 (59.50%), Query Frame = 3 Query: 165 LWLTSVICEIWFALSWLLDQFPKWYPVNRETYLDRLALRYDREGEPSQLAPVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSRYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGRSGGLDTDGNELPRLVYVSREKRPGFLHHKKAGAMNAL 890 +W+ + +CE +F+ WLL KW P + ++Y +RL R L VD+FV+T DP++EPP++ ANT+LS+LAV+YP +K++ YVSDDG + LT+ +L E ++FA+ WVPFCKK+NI+ RAP YF + F K+ KREYE+ R+ + + E D + P DH +++V GG+ + NE+P VY+SREKRP +LHH KAGAMN L Sbjct: 50 VWVVAFLCESFFSFIWLLITSIKWSPASYKSYPERLDERVH------DLPSVDMFVTTADPVREPPILVANTLLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNIKVRAPFRYFLNPPAATESS---EFSKDWEITKREYEKLSRRVEDATGDSHWLDAE----DDFEDFSNTKPNDHSTIVKVVWENKGGVGVE-NEVPHFVYISREKRPNYLHHYKAGAMNFL 277
BLAST of FC878505 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2) HSP 1 Score: 182.57 bits (462), Expect = 2.787e-45 Identity = 99/256 (38.67%), Postives = 145/256 (56.64%), Query Frame = 3 Query: 123 LQYRVTHPVKDAYPLWLTSVICEIWFALSWLLDQFPKWYPVNRETYLDRLALRYDREGEPSQLAPVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSRYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGRSGGLDTDGNELPRLVYVSREKRPGFLHHKKAGAMNAL 890 L YR+ H ++ +WL + +CE F+ WL+ KW P + Y +RL R L VD+FV T DP++EPP++ NTVLS+LAV+YP +K++ YVSDDG + LT+ +L E ++F + W PFCKK+N+ RAP YF + D + F K+ + MKREY + ++ + + + D + P DH +++V GG+ D E+P LVY+SREKRP +LHH K GAMN L Sbjct: 37 LWYRILHMCENN-TIWLVAFLCESCFSFMWLIITCIKWSPAEDKPYPNRLDERVH------DLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYFLNPLVATDDSV---FSKDWKMMKREYVKLCRKVEDATGDSHWLDAD----DDFEAFSNTKPNDHSTIVKVVWENKGGVG-DEKEVPHLVYISREKRPNYLHHYKTGAMNFL 277
BLAST of FC878505 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 4.754e-45 Identity = 100/243 (41.15%), Postives = 141/243 (58.02%), Query Frame = 3 Query: 165 LWLTSVICEIWFALSWLLDQFPKWYPVNRETYLDRLALR-YDREGEPSQLAPVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSRYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGRSGGLDTDGNELPRLVYVSREKRPGFLHHKKAGAMNAL 890 +WL + +CE F+ WLL KW P + Y DRL R YD L VD+FV T DP++EPP++ NTVLS+LAV+YP +K++ YVSDDG + LT+ +L E ++FA+ WVPFCKK+N++ RAP YF + F ++ KREYE+ ++ + + T + + P DH +I+V GG+ D E+P +VY+SREKRP +LHH KAGAMN L Sbjct: 50 IWLVAFLCESCFSFVWLLSTCTKWSPAETKPYPDRLDERVYD-------LPSVDMFVPTADPVREPPIMVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNLKVRAPFRYFLNPFAATEGS---EFSRDWEMTKREYEKLCRKVEDATGDSHLL----GTDNELEAFSNTKPNDHSTIIKVVWENKGGVG-DEKEVPHIVYISREKRPNYLHHYKAGAMNFL 277
BLAST of FC878505 vs. ExPASy Swiss-Prot
Match: CSLE1_ARATH (Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.383e-44 Identity = 106/246 (43.09%), Postives = 144/246 (58.54%), Query Frame = 3 Query: 165 LWLTSVICEIWFALSWLLDQFPKWYPVNRETYLDRLALRYDREGEPSQLAPVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSRYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQ-DG-TPWPGN-NPRDHPGMIQVFL-GRSGGLDTDGNELPRLVYVSREKRPGFLHHKKAGAMNAL 890 +W I EIWF L W++ Q +W PV R + DRL+ RY S L +D+FV T DP+ EPPL+ NTVLS+ A+DYP +K++ Y+SDDG + LTF AL+E AEFA+ WVPFCKK N+EP +P Y + K + L + + + Y E RI A+ ++PEE DG + W + R+H ++QV + GR G +P LVY+SREKRP H+ KAGAMNAL Sbjct: 65 IWFVMFIVEIWFGLYWVVTQSSRWNPVWRFPFSDRLSRRYG-----SDLPRLDVFVCTADPVIEPPLLVVNTVLSVTALDYPPEKLAVYLSDDGGSELTFYALTEAAEFAKTWVPFCKKFNVEPTSPAAYLSSKANCLDSAAE--------EVAKLYREMAARIET-AARLGRIPEEARVKYGDGFSQWDADATRRNHGTILQVLVDGREGNTIA----IPTLVYLSREKRPQHHHNFKAGAMNAL 292
BLAST of FC878505 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 3.407e-43 Identity = 97/256 (37.89%), Postives = 143/256 (55.86%), Query Frame = 3 Query: 123 LQYRVTHPVKDAYPLWLTSVICEIWFALSWLLDQFPKWYPVNRETYLDRLALRYDREGEPSQLAPVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSRYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGRSGGLDTDGNELPRLVYVSREKRPGFLHHKKAGAMNAL 890 L YR+ H + + +WL + CE F+L WL+ KW P Y++ L R L +D+FV T D ++E P++T NTVLS+LAV+YP +K++ YVSDDG + LT+ +L E ++F + W PFCKK+N+ RAP YF + D + F K+ + MKREY + ++ + + + D + P DH +++V GG+ D E+P LVY+SREKRP +LHH K GAMN L Sbjct: 37 LLYRILH-ISENDNVWLLAFFCESCFSLVWLIFTCLKWSPAEDIPYINTLNERVH------DLPSLDMFVPTADTVRESPIITVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYFLNPLVATDDSV---FSKDWKMMKREYVKLCRKVEDATGDSHWLDAD----DDFEAFSNTKPNDHSTIVKVVWENKGGVG-DEKEVPHLVYISREKRPNYLHHYKTGAMNFL 277
BLAST of FC878505 vs. ExPASy Swiss-Prot
Match: CSLB1_ARATH (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 5.811e-43 Identity = 96/256 (37.50%), Postives = 146/256 (57.03%), Query Frame = 3 Query: 123 LQYRVTHPVKDAYPLWLTSVICEIWFALSWLLDQFPKWYPVNRETYLDRLALRYDREGEPSQLAPVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSRYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGRSGGLDTDGNELPRLVYVSREKRPGFLHHKKAGAMNAL 890 L +R+ H + +WL + CE F L LL KW P + + + DRL R L VD+FV T DP++EPP++ +TVLS+LAV+YP +K++ YVSDDG + LT+ +L E ++FA+ WVPFCKK+N RAP YF + I + + F ++ KREYE+ + ++ + + E D + P DH +++V GG+ D E+P ++Y+SREKRP ++H++K GAMN L Sbjct: 37 LLHRIRH-TSEYDNVWLVAFFCESCFFLVCLLITCLKWSPADTKPFPDRLDERVH------DLPSVDMFVPTADPVREPPIMVVDTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNTRVRAPSRYFLKPISVATEDYE--FNRDWEKTKREYEKLRRKVEDATGDSHMLDVE----DDFEAFSNTKPNDHSTLVKVVWENKGGVG-DEKEIPHIIYISREKRPNYVHNQKCGAMNFL 278
BLAST of FC878505 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 1.295e-42 Identity = 109/258 (42.25%), Postives = 142/258 (55.04%), Query Frame = 3 Query: 123 LQYRVTHPVKDAYPLWLTSVICEIWFALSWLLDQFPKWYPVNRETYLDRLALRYDREGEPSQLAPVDIFVSTVDPLKEPPLVTANTVLSILAVDYPV--DKVSRYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGRSGGLDTDGNELPRLVYVSREKRPGFLHHKKAGAMNAL 890 L +RV H P ++ CE WF WLL+ KW PV +T+ + LA R D +L VD+FV+T DP+ EPPLVT NTVLS+LA+DYP +K++ YVSDDG + LT AL E A FAR WVPFC++H + RAP YF+ ++ F+++ MK EYE+ RI + G + GN HP +I+V + DG PRL+YVSREK P HH KAGAMNAL Sbjct: 37 LLHRVLHD--SGAPWRRAALACEAWFTFMWLLNVNAKWSPVRFDTFPENLAERID------ELPAVDMFVTTADPVLEPPLVTVNTVLSLLALDYPAAGEKLACYVSDDGCSPLTCYALREAARFARTWVPFCRRHGVAVRAPFRYFSSTPEF--GPADGKFLEDWTFMKSEYEKLVHRIEDADEPSLLRHGGGEFAEFLDVERGN----HPTIIKVLWDNNRSRTGDG--FPRLIYVSREKSPNLHHHYKAGAMNAL 278
BLAST of FC878505 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 7.351e-38 Identity = 97/265 (36.60%), Postives = 137/265 (51.70%), Query Frame = 3 Query: 123 LQYRVTHPVKDAYPLWLTSVIC--EIWFALSWLLDQFPKWYPVNRETYLDRLALRYDREGEPSQLAPVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSRYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDG-----TPWPGNNPR-DHPGMIQVFLGRSGGL-DTDGNELPRLVYVSREKRPGFLHHKKAGAMNAL 890 L Y H + A +TS++ +I A W ++ PV R Y ++ A EP +D+F+ T DP KEPP++ NT LS++A +YP DK+S YVSDDG + LT AL E A+F++ W+PFCKK+N++ R+PE YF+ K+ D E +K YE+ K R+ +V + E + D W R DHP +IQV + DT +P L+YVSREK HH KAGA+N L Sbjct: 59 LMYHHVHSLLTANTTLITSLLLLSDIVLAFMWATTTSLRYKPVRRTEYPEKYA------AEPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSDKISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKKNNVQDRSPEVYFSSKLRSRSD--------EAENIKMMYEDMKSRVEHVVESGK--VETAFITCDQFRGVFDLWTDKFTRHDHPTIIQVLQNSENDMDDTKKYIMPNLIYVSREKSKVSSHHFKAGALNTL 307 The following BLAST results are available for this feature:
BLAST of FC878505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878505 ID=FC878505; Name=FC878505; organism=Citrus clementina; type=EST; length=915bpback to top |