FC878505
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878505 vs. ExPASy Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.825e-35 Identity = 94/265 (35.47%), Postives = 136/265 (51.32%), Query Frame = 3 Query: 123 LQYRVTHPVKDAYPLWLTSVIC--EIWFALSWLLDQFPKWYPVNRETYLDRLALRYDREGEPSQLAPVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSRYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDG-----TPWPGNNPR-DHPGMIQVFLGRSGGLD-TDGNELPRLVYVSREKRPGFLHHKKAGAMNAL 890 L Y H + A +T ++ +I A W + PV+R ++ A + P +D+F+ T DP KEPP++ NT LS++A +YP DK+S YVSDDG + LTF AL E A+F+++W+PFCKK+N++ R+PE YF+ + D E +K YE+ K R+ +V + E + D W R DHP +IQV +D T +P L+YVSREK HH KAGA+N L Sbjct: 40 LMYHHVHSLVTANNTLITCLLLLSDIVLAFMWATTTSLRLNPVHRTECPEKYAAK------PEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSDKISVYVSDDGGSSLTFFALIEAAKFSKQWLPFCKKNNVQDRSPEVYFSSESHSRSD--------EAENLKMMYEDMKSRVEHVVESGK--VETAFITCDQFRGVFDLWTDKFSRHDHPTIIQVLQNSETDMDNTRKYIMPNLIYVSREKSKVSPHHFKAGALNTL 288
BLAST of FC878505 vs. ExPASy Swiss-Prot
Match: CSLG2_ARATH (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 3.196e-33 Identity = 89/264 (33.71%), Postives = 131/264 (49.62%), Query Frame = 3 Query: 123 LQYRVTHPVKDAYPLWLTSVIC--EIWFALSWLLDQFPKWYPVNRETYLDRLALRYDREGEPSQLAPVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSRYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDGTP-----WPGNNPR-DHPGMIQVFLGRSGGLDTDGNELPRLVYVSREKRPGFLHHKKAGAMNAL 890 L Y H + +A +T ++ +I A W + P++R Y ++ A + P +D+F+ T DP KEPP++ NT LS++A +YP K+S YVSDDG + LT AL E A+F++ W+PFCK +N++ R+PE YF+ K D E +K YE+ K R+ +V + E + D W R DHP +I V + +P L+YVSREK HH KAGA+N L Sbjct: 37 LMYHHVHSIVNANNTLITCLLLLSDIVLAFMWATTTSLRLNPIHRTEYPEKYAAK------PEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSHKISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKNNNVQDRSPEVYFSSKSHSSSD--------EAENLKMMYEDMKSRVEHVVESGK--VETAFIACDQFSCVFDLWTDKFTRHDHPTIIMVL------QHNETEMMPNLIYVSREKSKVSPHHFKAGALNTL 278
BLAST of FC878505 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSJ (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3) HSP 1 Score: 115.931 bits (289), Expect = 3.204e-25 Identity = 68/171 (39.77%), Postives = 93/171 (54.39%), Query Frame = 3 Query: 165 LWLTSVICEIWFALSWLLDQFPKWYPVNRETYLDRLALR----YDREGEPSQLAPVDIFVSTVDPLKEPPLVTANTVLSILAVDYPV--DKVSRYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKID-YLKDKIQPSFVKERRAMKREYEEFKVRI 656 +W +++CE WFA L+ KW PV T + L E +L VD+ V+T DP EPPLVT NTVLS+LA+DYP ++++ YVSDDG + LT AL E A FA WVPFC+++ + RAP YF+ F+ + MK EY++ RI Sbjct: 82 VWRVALVCEAWFAALCALNVSAKWSPVRFVTRPENLVAEGRTPSTTAAEYGELPAVDMLVTTADPALEPPLVTVNTVLSLLALDYPRAGERLACYVSDDGCSPLTCHALREAAGFAAAWVPFCRRYGVAVRAPFRYFSSSSSPESGGPADRKFLDDWTFMKDEYDKLVRRI 252
BLAST of FC878505 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSI (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica GN=CSLH2 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 3.204e-25 Identity = 68/171 (39.77%), Postives = 93/171 (54.39%), Query Frame = 3 Query: 165 LWLTSVICEIWFALSWLLDQFPKWYPVNRETYLDRLALR----YDREGEPSQLAPVDIFVSTVDPLKEPPLVTANTVLSILAVDYPV--DKVSRYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKID-YLKDKIQPSFVKERRAMKREYEEFKVRI 656 +W +++CE WFA L+ KW PV T + L E +L VD+ V+T DP EPPLVT NTVLS+LA+DYP ++++ YVSDDG + LT AL E A FA WVPFC+++ + RAP YF+ F+ + MK EY++ RI Sbjct: 82 VWRVALVCEAWFAALCALNVSAKWSPVRFVTRPENLVAEGRTPSTTAAEYGELPAVDMLVTTADPALEPPLVTVNTVLSLLALDYPRAGERLACYVSDDGCSPLTCHALREAAGFAAAWVPFCRRYGVAVRAPFRYFSSSSSPESGGPADRKFLDDWTFMKDEYDKLVRRI 252
BLAST of FC878505 vs. ExPASy Swiss-Prot
Match: CSLH3_ORYSJ (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 2.224e-18 Identity = 61/169 (36.09%), Postives = 85/169 (50.30%), Query Frame = 3 Query: 417 KVSRYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDG---TPWPGNNPRDHPGMIQVF--------LGRSGGLDTDGNELPRLVYVSREKRPGFLHHKKAGAMNAL 890 +++ YVSDDG + +T+ AL E A FAR WVPFC++H + RAP YFA ++ F+ + MK EY++ LV + + E Q G + +H +++V +G GG P L+YVSREK PG HH KAGAMNAL Sbjct: 173 RLACYVSDDGCSPVTYYALREAAGFARTWVPFCRRHGVAVRAPFRYFASAPEF--GPADRKFLDDWTFMKSEYDK-------LVRRIEDADETTLLRQGGGEFAEFMDAKRTNHRAIVKVIWDNNSKNRIGEEGG-------FPHLIYVSREKSPGHHHHYKAGAMNAL 325 The following BLAST results are available for this feature:
BLAST of FC878505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878505 ID=FC878505; Name=FC878505; organism=Citrus clementina; type=EST; length=915bpback to top |