FC878509

Overview
NameFC878509
Unique NameFC878509
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878509 vs. ExPASy Swiss-Prot
Match: ADH2_KLUMA (Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus GN=ADH2 PE=3 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 2.829e-11
Identity = 57/221 (25.79%), Postives = 90/221 (40.72%), Query Frame = 1
Query:   76 KAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPL---FPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCH-SEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVD 723
            K  + +E G  L  +++ V  P+ NE+ + + ++ +CHTD++ W  KG  PL    P + GHE  G+V ++G+ V   + GD   +    G C  C  C  S ESN  D      D     +DG                  +F +Y        A I     L +V  + C   T + A +  A+ K G  VAI                +   R++G+D
Sbjct:    8 KGVIFYENGGQLYYKDIPVPKPKSNELLINVKYSGVCHTDLHAW--KGDWPLDTKLPLVGGHEGAGVVVAMGDNVKGWKIGDLAGIKWLNGSCMNCEECELSNESNCPD-----ADLSGYTHDG------------------SFQQYATADAVQAAHIPAGTDLAQVAPILCAGVTVYKA-LKTAEMKAGDWVAISGAAGGLGSLAVQYAKAMGFRVLGID 202          
BLAST of FC878509 vs. ExPASy Swiss-Prot
Match: TDH_PYRFU (Probable L-threonine 3-dehydrogenase OS=Pyrococcus furiosus GN=tdh PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.694e-11
Identity = 71/233 (30.47%), Postives = 96/233 (41.20%), Query Frame = 1
Query:   94 EAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTD--VYFWEAKGQTPLF-PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAQKFGVTEFVNP 783
            E G  LV  EV+V  P   EV +KIL TS+C TD  +Y W    QT +  P+I GHE  G V  VG GV  ++ GD+V       C +C  C   + ++C     NT    +  DG                   F+EY V     V K NP     +   L   +  G      +A P  G+SV I              + SGA  +I  + +  R N A+K G    +NP
Sbjct:   14 EYGAELV--EVDVPKPGPGEVLIKILATSICGTDLHIYEWNEWAQTRIRPPQIMGHEVAGEVVEVGPGVEGIEVGDYVSVETHIVCGKCYACKRGQYHVCQ----NTKIFGVDTDG------------------VFAEYAVVPAQNVWK-NPKNIPPEYATLQEPL--GNAVDTVLAGPIAGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSEFRRNLAKKVGADYVINP 219          
BLAST of FC878509 vs. ExPASy Swiss-Prot
Match: ADH2_CANAL (Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH2 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.694e-11
Identity = 56/239 (23.43%), Postives = 94/239 (39.33%), Query Frame = 1
Query:   76 KAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPL---FPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAQKFGVTEFVN 780
            KA +    G  L  +++ V  P+ NE+ + + ++ +CHTD++ W  KG  PL    P + GHE  G+V ++GE V   + GD+  +    G C  C +C S     C       D     +DG                  +F +Y        A+I     L  V  + C   T + A +  A+ + GQ VAI                +   R++ +D    +    +  G   F++
Sbjct:    8 KAVIFETNGGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAW--KGDWPLATKLPLVGGHEGAGVVVALGENVKGWKVGDYAGVKWLNGSCLNCEYCQSGAEPNC----AEADLSGYTHDG------------------SFQQYATADAVQAARIPAGTDLANVAPILCAGVTVYKA-LKTAELEAGQWVAISGAAGGLGSLAVQYAKAMGYRVLAIDGGEDKGEFVKSLGAETFID 221          
BLAST of FC878509 vs. ExPASy Swiss-Prot
Match: YJJN_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yjjN OS=Escherichia coli (strain K12) GN=yjjN PE=3 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 4.825e-11
Identity = 31/99 (31.31%), Postives = 52/99 (52.53%), Query Frame = 1
Query:  103 KPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRI 399
            K LV ++ E+  P  NE  +KI    +C TD++ W        +PR+ GHE  G +  +G+ + DL+ G  V  +    C++CP C S  +N C+ + +
Sbjct:   13 KELVWKQREIPIPGDNEALIKIKSVGICGTDIHAWGGNQPFFSYPRVLGHEICGEIVGLGKNIADLKNGQQVAVIPYVACQQCPACKSGRTNCCEKISV 111          
BLAST of FC878509 vs. ExPASy Swiss-Prot
Match: CAD8A_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8A OS=Oryza sativa subsp. japonica GN=CAD8A PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.230e-11
Identity = 50/221 (22.62%), Postives = 91/221 (41.18%), Query Frame = 1
Query:  142 QKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDLLRI---NTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEA-QKFGVTEFVNPKD 789
            ++++V +K+L+  +CHTD++  + +    ++P + GHE  G+V  VG GVT  + GD V +  F   C+ C  C   + N C  + I    TD G     G                   FS+  V     V ++  + P D    L C   T +   V       G+ + +              +  G  ++  +  +P++  EA ++ G   F++ +D
Sbjct:   31 EEDDVTIKVLYCGICHTDLHTIKNEWGNAMYPVVPGHEIVGVVAGVGAGVTRFKAGDTVGVGYFVDSCRACDSCGKGDENYCPTMVITSNGTDYGGATTQG------------------GFSDVMVVRQDYVLRVPASLPPDGAAPLLCAGVTVYSPMVEYGLNAPGKHLGVVGLGGLGHLGVKFGKAFG-MKVTVISSSPAKREEALERLGADAFLSSRD 232          
The following BLAST results are available for this feature:
BLAST of FC878509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
ADH2_KLUMA2.829e-1125.79Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus... [more]
TDH_PYRFU3.694e-1130.47Probable L-threonine 3-dehydrogenase OS=Pyrococcus... [more]
ADH2_CANAL3.694e-1123.43Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH... [more]
YJJN_ECOLI4.825e-1131.31Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
CAD8A_ORYSJ8.230e-1122.62Probable cinnamyl alcohol dehydrogenase 8A OS=Oryz... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ5YP14RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ5YP14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878509 ID=FC878509; Name=FC878509; organism=Citrus clementina; type=EST; length=809bp
CTAATTTTACAGGTGTTGAGAGTATCATCATTCATCATCAATATGTCTGG
CACAGCTGGTCAAGTTATTCGCTGCAAAGCGGCGGTGGCATGGGAGGCGG
GGAAGCCACTGGTGATTGAAGAAGTGGAGGTGGCTCCACCACAGAAAAAT
GAAGTTCGATTGAAGATCCTCTTCACCTCTTTATGCCATACTGATGTTTA
CTTCTGGGAAGCCAAGGGACAAACACCTCTCTTTCCTCGCATTTTTGGTC
ACGAAGCTGGAGGGATTGTAGAAAGTGTAGGGGAGGGGGTAACTGATCTC
CAACCAGGAGACCATGTTCTTCCTGTGTTCACAGGAGAGTGCAAGGAATG
TCCTCACTGTCATTCAGAGGAAAGCAATATGTGTGACCTCCTCAGGATCA
ATACTGACAGGGGTGTTATGATTAATGATGGTCAGTCGAGATTCTCGATT
AAGGGGAAGCCAATTTACCATTTTGTGGGCACTTCTACCTTCAGTGAATA
CACTGTTACCCATGTCGGTTGTGTTGCTAAGATCAATCCTGCTGCCCCTC
TTGACAAAGTTTGTGTGCTTAGCTGTGGAATCTCCACAGGTTTTGGGGCT
ACTGTTAATGTCGCCAAACCGAAGAAGGGCCAGTCTGTTGCCATTTTTGG
ATTGGGTGCAGTTGGCCTCGCTGCTGCCGAAGGGGCAAGGGTATCAGGGG
CTTCCAGGATCATTGGTGTTGATTTGAACCCAAGCAGATTCAATGAAGCC
CAGAAGTTTGGGGTTACCGAGTTTGTGAATCCAAAGGATATGACAAACCT
GTTCAACAG
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