FC878509

Overview
NameFC878509
Unique NameFC878509
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878509 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 3.496e-86
Identity = 154/248 (62.10%), Postives = 183/248 (73.79%), Query Frame = 1
Query:   46 SGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAQKFGVTEFVNPKD 789
            S T GQVI CKAAVAWEA KP+ IE+V+VAPPQ  EVR+KILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT++QPGDHV+P +  EC+EC  C S ++N+C  +R  T  GVM+ND +SRFSI GKPIYHF+GTSTFS+YTV H   VAKINP APLDKVC+L CG+STG GA  N AK + G  VAIF             + +GASRIIG+D++  +F+ A+ FGVTEFVNPKD
Sbjct:    3 SSTQGQVITCKAAVAWEANKPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKD 250          
BLAST of FC878509 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 7.789e-86
Identity = 153/248 (61.69%), Postives = 183/248 (73.79%), Query Frame = 1
Query:   46 SGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAQKFGVTEFVNPKD 789
            S T GQVI CKAAVAWEA +P+ IE+V+VAPPQ  EVR+KILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT++QPGDHV+P +  EC+EC  C S ++N+C  +R  T  GVM+ND +SRFSI GKPIYHF+GTSTFS+YTV H   VAKINP APLDKVC+L CG+STG GA  N AK + G  VAIF             + +GASRIIG+D++  +F+ A+ FGVTEFVNPKD
Sbjct:    3 SSTQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKD 250          
BLAST of FC878509 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.918e-84
Identity = 151/248 (60.89%), Postives = 182/248 (73.39%), Query Frame = 1
Query:   46 SGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAQKFGVTEFVNPKD 789
            S T GQVI CKAAVA+E  KPLVIE+V+VAPPQ  EVR+KILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVTD+QPGDHV+P +  ECKEC  C S ++N+C  +R  T  GVM+ND +SRFS+ GKPIYHF+GTSTFS+YTV H   VAKINP APLDKVC+L CG+ TG GA  N AK + G  VA+F             + +GASR+IG+D++  +F+ A+ FGVTEFVNPK+
Sbjct:    3 SPTQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTDVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVRSATGVGVMMNDMKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVPTGLGAVWNTAKVESGSVVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDNKKFDVAKNFGVTEFVNPKE 250          
BLAST of FC878509 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 306.99 bits (785), Expect = 8.060e-83
Identity = 146/246 (59.35%), Postives = 180/246 (73.17%), Query Frame = 1
Query:   52 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAQKFGVTEFVNPKD 789
            T GQVI CKAAVA+E  KPLVIE+V+VAPPQ  EVR+KIL+T+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT++Q GDHV+P +  EC+EC  C S ++N+C  +R  T  G+M+ND +SRFS+ GKPIYHF+GTSTFS+YTV H   VAKI+P APLDKVC+L CG+ TG GA  N AK + G +VAIF             + +GASRIIG+D++  ++  A+KFGV EFVNPKD
Sbjct:    3 TQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKD 248          
BLAST of FC878509 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 3.063e-82
Identity = 148/246 (60.16%), Postives = 180/246 (73.17%), Query Frame = 1
Query:   52 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAQKFGVTEFVNPKD 789
            T GQVI CKAAVAWE  KPL IE+VEVAPPQ NEVR++ILFT+LCHTD Y    K    LFP I GHEA GIVESVGEGVTD++PGDHV+P +  EC EC  C S ++N+C  +R  T  GVM+ D +SRFS+KGKPIYHF+GTSTFS+YTV H   VAKI+P APLDKVC+L CG+ TG GA  N AK + G  VAIF             + +GASRIIG+D++ ++++ A+ FGVTEF+NPKD
Sbjct:    2 TQGQVITCKAAVAWEPNKPLTIEDVEVAPPQANEVRIQILFTALCHTDAYTLGGKDPEGLFPCILGHEAAGIVESVGEGVTDVKPGDHVIPSYQAECGECKFCKSPKTNLCGKVRAATGVGVMMADRKSRFSVKGKPIYHFMGTSTFSQYTVVHDVSVAKIHPDAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSNKYDTAKNFGVTEFINPKD 247          
BLAST of FC878509 vs. ExPASy Swiss-Prot
Match: ADH1_ZEALU (Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurians GN=ADH1 PE=3 SV=2)

HSP 1 Score: 290.426 bits (742), Expect = 7.807e-78
Identity = 139/175 (79.43%), Postives = 149/175 (85.14%), Query Frame = 1
Query:  265 IVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAQKFGVTEFVNPKD 789
            I+ESVGEGVTD+ PGDHVLPVFTGECKEC HC S ESNMCDLLRINTDRGVMI DG+SRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKVCVLSCGISTG GA++NVAKP KG +VA+F             R++GASRIIGVDLNPSRF EA+KFG TEFVNPKD
Sbjct:    1 IIESVGEGVTDVAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPQAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAVFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFEEARKFGCTEFVNPKD 175          
BLAST of FC878509 vs. ExPASy Swiss-Prot
Match: ADHL6_ARATH (Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2)

HSP 1 Score: 283.878 bits (725), Expect = 7.307e-76
Identity = 133/245 (54.29%), Postives = 179/245 (73.06%), Query Frame = 1
Query:   61 QVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAQKFGVTEFVNPKDMT 795
            QVI C AAVAW AG+PLV+EEVEV+PPQ  E+R+K++ TSLC +D+  WE++    L PRIFGHEA GIVES+GEGVT+ + GDHVL VFTGEC  C HC S +SNMC +L +   +G+M +D ++RFSIKGKP+YH+   S+FSEYTV H GC  K++P APL K+C+LSCG++ G GA  NVA  +KG SV IF             ++ GA++I+GVD+NP++  +A+ FGVT+F+N  D++
Sbjct:   12 QVITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWESQS---LLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLGMER-KGLMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAKTFGVTDFINSNDLS 252          
BLAST of FC878509 vs. ExPASy Swiss-Prot
Match: ADHX_RAT (Alcohol dehydrogenase class-3 OS=Rattus norvegicus GN=Adh5 PE=1 SV=2)

HSP 1 Score: 283.108 bits (723), Expect = 1.246e-75
Identity = 138/247 (55.87%), Postives = 177/247 (71.66%), Query Frame = 1
Query:   55 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAQKFGVTEFVNPKDMT 795
            A QVIRCKAAVAWEAGKPL IEE+EVAPPQ +EVR+KI+ T++CHTD Y          FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R+   +G+M  DG SRF+ KGKPI HF+GTSTFSEYTV     VAKI+P+APLDKVC+L CGISTG+GA VN AK + G + A+F             +V+GASRIIG+D+N  +F +A++FG TE +NP+D +
Sbjct:    2 ANQVIRCKAAVAWEAGKPLSIEEIEVAPPQAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKPILHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGATECINPQDFS 247          
BLAST of FC878509 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 2.351e-74
Identity = 133/246 (54.07%), Postives = 173/246 (70.33%), Query Frame = 1
Query:   52 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAQKFGVTEFVNPKD 789
            TAG+VI+CKAAVAWE GKPL IEEVEVAPP  +EVR+K+  T +CHTD Y         LFP I GHE  G VESVGEGVT  +PGD V+P++  +C EC  C + ++N+C  +RI   +G ++ D  SRF+ KGK ++HF+GTSTFSEYTV     +AK+N  AP+DKVC+L CGISTG+GA +N AK + G + A+F             +V+GA+RIIG+DLNP++F  A++FG TEFVNPKD
Sbjct:    3 TAGKVIKCKAAVAWEPGKPLSIEEVEVAPPNAHEVRIKLFATGVCHTDAYTLSGSDPEGLFPVILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRITQGQG-LLPDKTSRFTCKGKQVFHFMGTSTFSEYTVVADISLAKVNEKAPMDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGAVGLAVIMGCKVAGATRIIGIDLNPAKFETAKEFGATEFVNPKD 247          
BLAST of FC878509 vs. ExPASy Swiss-Prot
Match: ADHX_MOUSE (Alcohol dehydrogenase class-3 OS=Mus musculus GN=Adh5 PE=1 SV=3)

HSP 1 Score: 276.944 bits (707), Expect = 8.932e-74
Identity = 134/247 (54.25%), Postives = 177/247 (71.66%), Query Frame = 1
Query:   55 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAQKFGVTEFVNPKDMT 795
            A QVIRCKAAVAWEAGKPL IEE+EVAPP+ +EVR+KIL T++CHTD Y          FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R+   +G+M  DG SRF+ KGK ++HF+GTSTFSEYTV     VAKI+P+APLDKVC+L CGISTG+GA VN AK + G + A+F             +V+GASRIIG+D+N  +F +A++FG +E ++P+D +
Sbjct:    2 ANQVIRCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKILATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKSVFHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGASECISPQDFS 247          
The following BLAST results are available for this feature:
BLAST of FC878509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
ADHX_ORYSI3.496e-8662.10Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ORYSJ7.789e-8661.69Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_MAIZE1.918e-8460.89Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHX_ARATH8.060e-8359.35Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHX_PEA3.063e-8260.16Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADH1_ZEALU7.807e-7879.43Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurian... [more]
ADHL6_ARATH7.307e-7654.29Alcohol dehydrogenase-like 6 OS=Arabidopsis thalia... [more]
ADHX_RAT1.246e-7555.87Alcohol dehydrogenase class-3 OS=Rattus norvegicus... [more]
ADHX_SPAAU2.351e-7454.07Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
ADHX_MOUSE8.932e-7454.25Alcohol dehydrogenase class-3 OS=Mus musculus GN=A... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAQ5YP14RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ5YP14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878509 ID=FC878509; Name=FC878509; organism=Citrus clementina; type=EST; length=809bp
CTAATTTTACAGGTGTTGAGAGTATCATCATTCATCATCAATATGTCTGG
CACAGCTGGTCAAGTTATTCGCTGCAAAGCGGCGGTGGCATGGGAGGCGG
GGAAGCCACTGGTGATTGAAGAAGTGGAGGTGGCTCCACCACAGAAAAAT
GAAGTTCGATTGAAGATCCTCTTCACCTCTTTATGCCATACTGATGTTTA
CTTCTGGGAAGCCAAGGGACAAACACCTCTCTTTCCTCGCATTTTTGGTC
ACGAAGCTGGAGGGATTGTAGAAAGTGTAGGGGAGGGGGTAACTGATCTC
CAACCAGGAGACCATGTTCTTCCTGTGTTCACAGGAGAGTGCAAGGAATG
TCCTCACTGTCATTCAGAGGAAAGCAATATGTGTGACCTCCTCAGGATCA
ATACTGACAGGGGTGTTATGATTAATGATGGTCAGTCGAGATTCTCGATT
AAGGGGAAGCCAATTTACCATTTTGTGGGCACTTCTACCTTCAGTGAATA
CACTGTTACCCATGTCGGTTGTGTTGCTAAGATCAATCCTGCTGCCCCTC
TTGACAAAGTTTGTGTGCTTAGCTGTGGAATCTCCACAGGTTTTGGGGCT
ACTGTTAATGTCGCCAAACCGAAGAAGGGCCAGTCTGTTGCCATTTTTGG
ATTGGGTGCAGTTGGCCTCGCTGCTGCCGAAGGGGCAAGGGTATCAGGGG
CTTCCAGGATCATTGGTGTTGATTTGAACCCAAGCAGATTCAATGAAGCC
CAGAAGTTTGGGGTTACCGAGTTTGTGAATCCAAAGGATATGACAAACCT
GTTCAACAG
back to top