FC878526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878526 vs. ExPASy Swiss-Prot
Match: ATB17_ARATH (Homeobox-leucine zipper protein ATHB-17 OS=Arabidopsis thaliana GN=ATHB-17 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.316e-25 Identity = 55/83 (66.27%), Postives = 70/83 (84.34%), Query Frame = 3 Query: 618 DEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDE 866 D+ RKKLRLT+EQS LLE+SF+Q+ TLNPKQK+ LA+ L LRPRQ+EVWFQNRRAR+KLKQTE++CE+LK+ +LT+E Sbjct: 131 DDGSAPPRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEE 213
BLAST of FC878526 vs. ExPASy Swiss-Prot
Match: ATHBX_ARATH (Homeobox-leucine zipper protein ATHB-X OS=Arabidopsis thaliana GN=ATHB-X PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.153e-21 Identity = 53/85 (62.35%), Postives = 64/85 (75.29%), Query Frame = 3 Query: 612 DEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDE 866 D+ G RKKLRLTKEQS LLEESF Q+ TL PKQK+ LA L L RQVEVWFQNRRAR+KLK TE++CE+LK+ +L ++ Sbjct: 59 DDSNSGGRRRKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRARSKLKHTEMECEYLKRWFGSLKEQ 143
BLAST of FC878526 vs. ExPASy Swiss-Prot
Match: HOX26_ORYSJ (Putative homeobox-leucine zipper protein HOX26 OS=Oryza sativa subsp. japonica GN=HOX26 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.757e-21 Identity = 50/80 (62.50%), Postives = 63/80 (78.75%), Query Frame = 3 Query: 618 DEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETL 857 DE+G + RKKLRLT EQ+ LLE+SF+ H+ L+ +KQ LA +L L RQVEVWFQNRRARTKLKQTE DC+ L++ C+ L Sbjct: 110 DEEGAS-RKKLRLTGEQATLLEDSFRAHNILSHAEKQELAGKLGLSARQVEVWFQNRRARTKLKQTEADCDLLRRWCDHL 188
BLAST of FC878526 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSJ (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica GN=HOX16 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.845e-14 Identity = 41/72 (56.94%), Postives = 50/72 (69.44%), Query Frame = 3 Query: 642 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETL 857 KK RLT EQ LLE SF++ + L P++K LAR+L L+PRQV VWFQNRRAR K KQ E D + LK + L Sbjct: 77 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDAL 148
BLAST of FC878526 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSI (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica GN=HOX16 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.845e-14 Identity = 41/72 (56.94%), Postives = 50/72 (69.44%), Query Frame = 3 Query: 642 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETL 857 KK RLT EQ LLE SF++ + L P++K LAR+L L+PRQV VWFQNRRAR K KQ E D + LK + L Sbjct: 79 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDAL 150
BLAST of FC878526 vs. ExPASy Swiss-Prot
Match: HAT5_ARATH (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana GN=HAT5 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.845e-14 Identity = 42/82 (51.22%), Postives = 53/82 (64.63%), Query Frame = 3 Query: 612 DEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETL 857 D+ D KK RLT EQ LLE+SF+ + L P++K LA++L L+PRQV VWFQNRRAR K KQ E D + LK + L Sbjct: 58 DDFYDDQLPEKKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYDQL 139
BLAST of FC878526 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSJ (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. japonica GN=HOX5 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.970e-13 Identity = 41/82 (50.00%), Postives = 52/82 (63.41%), Query Frame = 3 Query: 612 DEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETL 857 +E D KK RLT EQ +LE SF++ + L P++K LAR+L + PRQV VWFQNRRAR K KQ E D + LK + L Sbjct: 76 EEYYDEQAPEKKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDAL 157
BLAST of FC878526 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSI (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica GN=HOX5 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.970e-13 Identity = 41/82 (50.00%), Postives = 52/82 (63.41%), Query Frame = 3 Query: 612 DEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETL 857 +E D KK RLT EQ +LE SF++ + L P++K LAR+L + PRQV VWFQNRRAR K KQ E D + LK + L Sbjct: 76 EEYYDEQAPEKKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDAL 157
BLAST of FC878526 vs. ExPASy Swiss-Prot
Match: HOX23_ORYSJ (Homeobox-leucine zipper protein HOX23 OS=Oryza sativa subsp. japonica GN=HOX23 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.361e-13 Identity = 41/86 (47.67%), Postives = 54/86 (62.79%), Query Frame = 3 Query: 606 ASDEDEDGVNA-------RKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKK 842 AS+++EDG KK RL+ EQ LE SF+ + L P++K LAR L L+PRQV +WFQNRRAR K KQ E D + L++ Sbjct: 85 ASEDEEDGCGGGGGGGGGEKKRRLSVEQVRTLERSFESGNKLEPERKAQLARALGLQPRQVAIWFQNRRARWKTKQLEKDFDALRR 170
BLAST of FC878526 vs. ExPASy Swiss-Prot
Match: HOX23_ORYSI (Homeobox-leucine zipper protein HOX23 OS=Oryza sativa subsp. indica GN=HOX23 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.361e-13 Identity = 41/86 (47.67%), Postives = 54/86 (62.79%), Query Frame = 3 Query: 606 ASDEDEDGVNA-------RKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKK 842 AS+++EDG KK RL+ EQ LE SF+ + L P++K LAR L L+PRQV +WFQNRRAR K KQ E D + L++ Sbjct: 85 ASEDEEDGCGGGGGGGGGEKKRRLSVEQVRTLERSFESGNKLEPERKAQLARALGLQPRQVAIWFQNRRARWKTKQLEKDFDALRR 170 The following BLAST results are available for this feature:
BLAST of FC878526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878526 ID=FC878526; Name=FC878526; organism=Citrus clementina; type=EST; length=868bpback to top |