FC878533

Overview
NameFC878533
Unique NameFC878533
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length546
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP7C_HUMAN (Heat shock cognate 71 kDa protein OS=Homo sapiens GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 1.883e-82
Identity = 146/169 (86.39%), Postives = 160/169 (94.67%), Query Frame = 2
Query:   38 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            M+K PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NT+FDAKRLIGR+F+DA VQ+DMKHWPF VV+D G+PK++V YKGE K+F+PEEVSSMVLTKMKE AEAYLGKTV NAV+TVPAYFNDSQRQATKD+GTI+GLNV
Sbjct:    1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNV 169          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP7C_HORSE (Heat shock cognate 71 kDa protein OS=Equus caballus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 1.883e-82
Identity = 146/169 (86.39%), Postives = 160/169 (94.67%), Query Frame = 2
Query:   38 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            M+K PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NT+FDAKRLIGR+F+DA VQ+DMKHWPF VV+D G+PK++V YKGE K+F+PEEVSSMVLTKMKE AEAYLGKTV NAV+TVPAYFNDSQRQATKD+GTI+GLNV
Sbjct:    1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNV 169          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 304.679 bits (779), Expect = 1.883e-82
Identity = 146/169 (86.39%), Postives = 160/169 (94.67%), Query Frame = 2
Query:   38 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            M+K PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NT+FDAKRLIGR+F+DA VQ+DMKHWPF VV+D G+PK++V YKGE K+F+PEEVSSMVLTKMKE AEAYLGKTV NAV+TVPAYFNDSQRQATKD+GTI+GLNV
Sbjct:    1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNV 169          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 2.459e-82
Identity = 146/169 (86.39%), Postives = 160/169 (94.67%), Query Frame = 2
Query:   38 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            M+K PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NT+FDAKRLIGR+F+DA VQ+DMKHWPF VV+D G+PK++V YKGE K+F+PEEVSSMVLTKMKE AEAYLGKTV NAV+TVPAYFNDSQRQATKD+GTI+GLNV
Sbjct:    1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGEAKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNV 169          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 5.479e-82
Identity = 146/167 (87.43%), Postives = 158/167 (94.61%), Query Frame = 2
Query:   44 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            K PA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTIFDAKRLIGRK++D TVQ+DMKHWPF VV++GGKPK++V YKGE KTFFPEE+SSMVLTKMKE AEAYLGK V+ AVITVPAYFNDSQRQATKD+GTI+GLNV
Sbjct:    4 KGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKYDDPTVQSDMKHWPFRVVNEGGKPKVQVEYKGEMKTFFPEEISSMVLTKMKEIAEAYLGKKVETAVITVPAYFNDSQRQATKDAGTITGLNV 170          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP7C_PONAB (Heat shock cognate 71 kDa protein OS=Pongo abelii GN=HSPA8 PE=2 SV=2)

HSP 1 Score: 302.753 bits (774), Expect = 7.156e-82
Identity = 145/169 (85.80%), Postives = 159/169 (94.08%), Query Frame = 2
Query:   38 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            M+K PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NT+FDAKRLIGR+F+DA VQ+DMKHWPF VV+D G+PK++V YKGE K+F+PEEVSSMVL KMKE AEAYLGKTV NAV+TVPAYFNDSQRQATKD+GTI+GLNV
Sbjct:    1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLAKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNV 169          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP7C_CHICK (Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 9.346e-82
Identity = 143/169 (84.62%), Postives = 159/169 (94.08%), Query Frame = 2
Query:   38 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            M+K PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NT+FDAKRLIGR+F+D+ VQ+DMKHWPF VV+D G+PK++V YKGE K+F+PEE+SSMVLTKMKE AEAYLGKTV NAV+TVPAYFNDSQRQ TKD+GTI+GLNV
Sbjct:    1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDSVVQSDMKHWPFTVVNDAGRPKVQVEYKGETKSFYPEEISSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQGTKDAGTIAGLNV 169          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 1.221e-81
Identity = 144/169 (85.21%), Postives = 158/169 (93.49%), Query Frame = 2
Query:   38 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            M+K PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTIFDAKRLIGR+FED+ VQADMKHWPF V+SDGG+P+++V YKGE K F+PEE+SSMVL KMKE AEAYLGK++ NAVITVPAYFNDSQRQ TKD+GTISGLNV
Sbjct:    1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTIFDAKRLIGRRFEDSVVQADMKHWPFKVISDGGRPRLEVEYKGEAKNFYPEEISSMVLVKMKEIAEAYLGKSINNAVITVPAYFNDSQRQRTKDAGTISGLNV 169          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 7.912e-81
Identity = 144/168 (85.71%), Postives = 156/168 (92.86%), Query Frame = 2
Query:   41 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            AK P++GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT+FDAKRLIGRKF D  VQADMKHWPF VVSDGGKPK++V YKGE+K+F PEE+SSMVL KM+E AEAYLG+ V NAVITVPAYFNDSQRQATKD+G I+GLNV
Sbjct:    4 AKGPSIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTVFDAKRLIGRKFNDQVVQADMKHWPFKVVSDGGKPKVQVDYKGENKSFNPEEISSMVLVKMREIAEAYLGQKVSNAVITVPAYFNDSQRQATKDAGVIAGLNV 171          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP7A_DROME (Heat shock 70 kDa protein cognate 1 OS=Drosophila melanogaster GN=Hsc70-1 PE=1 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 1.350e-80
Identity = 143/169 (84.62%), Postives = 160/169 (94.67%), Query Frame = 2
Query:   38 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            M K PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT++ERLIGDAAKNQVAMNPNNTIFDAKRLIGR+F+DATVQ+DMKHWPF+V ++ GKP+I+V YKGE K+F+PEEVSSMVLTKM+ETAEAYLG TV +AV+TVPAYFNDSQRQATKD+G I+GLNV
Sbjct:    1 MPKLPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTESERLIGDAAKNQVAMNPNNTIFDAKRLIGRRFDDATVQSDMKHWPFEVFAENGKPRIRVEYKGERKSFYPEEVSSMVLTKMRETAEAYLGGTVTDAVVTVPAYFNDSQRQATKDAGAIAGLNV 169          
The following BLAST results are available for this feature:
BLAST of FC878533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_HUMAN1.883e-8286.39Heat shock cognate 71 kDa protein OS=Homo sapiens ... [more]
HSP7C_HORSE1.883e-8286.39Heat shock cognate 71 kDa protein OS=Equus caballu... [more]
HSP7C_BOVIN1.883e-8286.39Heat shock cognate 71 kDa protein OS=Bos taurus GN... [more]
HSP7C_CRIGR2.459e-8286.39Heat shock cognate 71 kDa protein OS=Cricetulus gr... [more]
HSP70_CHICK5.479e-8287.43Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]
HSP7C_PONAB7.156e-8285.80Heat shock cognate 71 kDa protein OS=Pongo abelii ... [more]
HSP7C_CHICK9.346e-8284.62Heat shock cognate 71 kDa protein OS=Gallus gallus... [more]
HSP7C_ICTPU1.221e-8185.21Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HSP70_ONCTS7.912e-8185.71Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HSP7A_DROME1.350e-8084.62Heat shock 70 kDa protein cognate 1 OS=Drosophila ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ5YP20RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ5YP20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878533 ID=FC878533; Name=FC878533; organism=Citrus clementina; type=EST; length=546bp
CTGATTTTACGACTGAAAATATAGTAAATTATTTAATATGGCCAAGGCAC
CCGCAGTAGGTATCGACTTGGGCACCACTTACTCGTGCGTGGGAGTATTC
CAGCACGGTAAGGTGGAGATCATCGCCAACGACCAGGGCAACAGGACTAC
ACCCTCATATGTAGCCTTCACCGATACGGAGCGTCTCATCGGAGATGCTG
CCAAGAACCAGGTTGCGATGAACCCCAACAACACCATCTTTGATGCCAAA
CGTCTTATTGGACGCAAGTTCGAAGATGCCACAGTCCAAGCTGACATGAA
ACATTGGCCTTTTGATGTCGTAAGTGATGGAGGTAAACCAAAGATCAAGG
TAGCATACAAGGGTGAAGACAAAACATTCTTCCCCGAAGAAGTTAGCTCA
ATGGTACTCACAAAAATGAAGGAAACTGCCGAGGCATACCTTGGCAAAAC
GGTGCAGAATGCAGTAATCACGGTTCCAGCCTATTTCAATGATTCACAGA
GGCAAGCCACAAAAGATTCCGGTACCATCTCTGGCTTAAACGTTTT
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