FC878533

Overview
NameFC878533
Unique NameFC878533
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length546
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP68_DROME (Heat shock protein 68 OS=Drosophila melanogaster GN=Hsp68 PE=1 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.001e-75
Identity = 133/165 (80.61%), Postives = 153/165 (92.73%), Query Frame = 2
Query:   50 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            PA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP N++FDAKRLIGR+F+D+ +Q D+KHWPF V++D GKPKI V +KG +K F PEE+SSMVLTKMKETAEAYLG TV++AVITVPAYFNDSQRQATKD+G I+G+NV
Sbjct:    2 PAIGIDLGTTYSCVGVFQYGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPKNSVFDAKRLIGRRFDDSKIQEDIKHWPFKVINDNGKPKISVEFKGANKCFSPEEISSMVLTKMKETAEAYLGTTVKDAVITVPAYFNDSQRQATKDAGAIAGINV 166          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP71_DROSI (Major heat shock 70 kDa protein Ab OS=Drosophila simulans GN=Hsp70Ab PE=2 SV=2)

HSP 1 Score: 281.182 bits (718), Expect = 2.230e-75
Identity = 134/165 (81.21%), Postives = 150/165 (90.91%), Query Frame = 2
Query:   50 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            PA+GIDLGTTYSCVGV+QHG+VEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP NT+FDAKRLIGRK++D  +  D+KHWPF VVSDGGKPKI V YKGE K F PEE+SSMVL KMKETAEAYLG+++ +AVITVPAYFNDSQRQATKD+G I+GLNV
Sbjct:    2 PAIGIDLGTTYSCVGVYQHGEVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDIKHWPFKVVSDGGKPKIGVEYKGESKRFAPEEISSMVLVKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNV 166          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP72_DROSI (Major heat shock 70 kDa protein Ba OS=Drosophila simulans GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 280.796 bits (717), Expect = 2.912e-75
Identity = 135/165 (81.82%), Postives = 149/165 (90.30%), Query Frame = 2
Query:   50 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            PA+GIDLGTTYSCVGV+QHGKVEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP NT+FDAKRLIGRK++D  +  DMKHWPF VVSD GKPKI V YKGE K F PEE+SSMVL KMKETAEAYLG+++ +AVITVPAYFNDSQRQATKD+G I+GLNV
Sbjct:    2 PAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDCGKPKIGVEYKGESKRFAPEEISSMVLAKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNV 166          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP74_PARLI (Heat shock 70 kDa protein IV OS=Paracentrotus lividus GN=HSP70IV PE=3 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 3.803e-75
Identity = 135/169 (79.88%), Postives = 151/169 (89.35%), Query Frame = 2
Query:   38 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            M   PA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTIFDAKRLIGR+F D+++QADMKHWPF V++  GKP ++  Y GE KT  PEEVSSMVLTKMKETAEAYLGK V +AVITVPAYFND+QRQATKD+G I+G+NV
Sbjct:    1 MESGPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTIFDAKRLIGRRFNDSSIQADMKHWPFRVINKDGKPMLQAEYMGETKTLSPEEVSSMVLTKMKETAEAYLGKKVTSAVITVPAYFNDAQRQATKDAGVIAGINV 169          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP72_USTMA (Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=UMS2 PE=3 SV=2)

HSP 1 Score: 279.256 bits (713), Expect = 8.473e-75
Identity = 133/164 (81.10%), Postives = 153/164 (93.29%), Query Frame = 2
Query:   53 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            A+GIDLGTTYSCV V+Q+ +VE+IANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP+NT+FDAKRLIGRKF+DA VQ+DMKHWPF+V S GGKP+I++ YKGE KTF PEE+SSMVL KM+ETAEAYLG TV++AV+TVPAYFNDSQRQATKD+G ISGLNV
Sbjct:    4 AIGIDLGTTYSCVAVWQNDRVEVIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFDDAEVQSDMKHWPFEVTSVGGKPQIRIEYKGEKKTFTPEEISSMVLLKMRETAEAYLGGTVKDAVVTVPAYFNDSQRQATKDAGIISGLNV 167          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP70_CERCA (Heat shock protein 70 OS=Ceratitis capitata PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 1.445e-74
Identity = 135/164 (82.32%), Postives = 147/164 (89.63%), Query Frame = 2
Query:   53 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            A+GIDLGTTYSC GVFQHGKVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NT+FDAKRLIGRK++D  +  D+KHWPF VVSDGGKPKI V YK E+K F PEE+SSMVLTKMKETAE  LG TV +AVITVPAYFNDSQRQATKD+G I+GLNV
Sbjct:    3 AIGIDLGTTYSCFGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPKNTVFDAKRLIGRKYDDPKIMEDVKHWPFKVVSDGGKPKISVEYKEENKQFAPEEISSMVLTKMKETAEVILGTTVTDAVITVPAYFNDSQRQATKDAGRIAGLNV 166          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP70_SCHMA (Heat shock 70 kDa protein homolog OS=Schistosoma mansoni PE=2 SV=2)

HSP 1 Score: 276.559 bits (706), Expect = 5.492e-74
Identity = 134/164 (81.71%), Postives = 148/164 (90.24%), Query Frame = 2
Query:   53 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP NT+FDAKRLIGR+F+D +VQ+DMKHWPF+V   GGK KI V YKGE K F  EE+SSMVLTKMKE AE+YLG+TV +AVITVPAYFNDSQRQATKD+G I+GLNV
Sbjct:    4 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDGAKNQVAMNPTNTVFDAKRLIGRRFDDPSVQSDMKHWPFEVTQVGGKLKICVEYKGEKKMFSAEEISSMVLTKMKEVAESYLGRTVSDAVITVPAYFNDSQRQATKDAGAIAGLNV 167          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 5.492e-74
Identity = 135/166 (81.33%), Postives = 150/166 (90.36%), Query Frame = 2
Query:   47 APAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            APAVGIDLGTTYSCVGVF+  +++IIANDQGNRTTPS+VAFTDTERLIGDAAKNQVAMNP+NT+FDAKRLIGR+F DA VQADMKHWPF VV   GKP I+V +KGE K F PEE+SSMVLTKM+ETAEA+LG TV NAVITVPAYFNDSQRQATKD+G I+GLNV
Sbjct:    2 APAVGIDLGTTYSCVGVFRDDRIDIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPHNTVFDAKRLIGRRFGDAEVQADMKHWPFKVVDKSGKPIIEVEFKGETKQFTPEEISSMVLTKMRETAEAFLGGTVNNAVITVPAYFNDSQRQATKDAGLIAGLNV 167          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP70_TRIRU (Heat shock 70 kDa protein OS=Trichophyton rubrum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 7.173e-74
Identity = 135/166 (81.33%), Postives = 150/166 (90.36%), Query Frame = 2
Query:   47 APAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            APAVGIDLGTTYSCVG+F+  ++EIIANDQGNRTTPS+VAFTDTERLIGDAAKNQVAMNP NT+FDAKRLIGRKF DA VQADMKH+PF VV   GKP ++V +KGE+K F PEE+SSMVLTKM+ETAEAYLG TV NAVITVPAYFNDSQRQATKD+G I+GLNV
Sbjct:    2 APAVGIDLGTTYSCVGIFRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRKFNDAEVQADMKHFPFKVVEKSGKPIVQVEFKGEEKQFTPEEISSMVLTKMRETAEAYLGGTVNNAVITVPAYFNDSQRQATKDAGLIAGLNV 167          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 274.248 bits (700), Expect = 2.726e-73
Identity = 135/165 (81.82%), Postives = 148/165 (89.70%), Query Frame = 2
Query:   53 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVV-SDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            ++GIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NT+FDAKRLIGRKF D  VQ+DMKHWPF V+  DG KP I+V +KGE K F PEE+SSMVL KMKETAEAYLGKT+ NAVITVPAYFNDSQRQATKD+GTIS LNV
Sbjct:    3 SIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFSDKEVQSDMKHWPFKVIPKDGDKPHIQVEFKGETKVFSPEEISSMVLLKMKETAEAYLGKTINNAVITVPAYFNDSQRQATKDAGTISKLNV 167          
The following BLAST results are available for this feature:
BLAST of FC878533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP68_DROME1.001e-7580.61Heat shock protein 68 OS=Drosophila melanogaster G... [more]
HSP71_DROSI2.230e-7581.21Major heat shock 70 kDa protein Ab OS=Drosophila s... [more]
HSP72_DROSI2.912e-7581.82Major heat shock 70 kDa protein Ba OS=Drosophila s... [more]
HSP74_PARLI3.803e-7579.88Heat shock 70 kDa protein IV OS=Paracentrotus livi... [more]
HSP72_USTMA8.473e-7581.10Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=... [more]
HSP70_CERCA1.445e-7482.32Heat shock protein 70 OS=Ceratitis capitata PE=2 S... [more]
HSP70_SCHMA5.492e-7481.71Heat shock 70 kDa protein homolog OS=Schistosoma m... [more]
HSP70_EMENI5.492e-7481.33Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HSP70_TRIRU7.173e-7481.33Heat shock 70 kDa protein OS=Trichophyton rubrum G... [more]
HS7C1_DICDI2.726e-7381.82Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ5YP20RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ5YP20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878533 ID=FC878533; Name=FC878533; organism=Citrus clementina; type=EST; length=546bp
CTGATTTTACGACTGAAAATATAGTAAATTATTTAATATGGCCAAGGCAC
CCGCAGTAGGTATCGACTTGGGCACCACTTACTCGTGCGTGGGAGTATTC
CAGCACGGTAAGGTGGAGATCATCGCCAACGACCAGGGCAACAGGACTAC
ACCCTCATATGTAGCCTTCACCGATACGGAGCGTCTCATCGGAGATGCTG
CCAAGAACCAGGTTGCGATGAACCCCAACAACACCATCTTTGATGCCAAA
CGTCTTATTGGACGCAAGTTCGAAGATGCCACAGTCCAAGCTGACATGAA
ACATTGGCCTTTTGATGTCGTAAGTGATGGAGGTAAACCAAAGATCAAGG
TAGCATACAAGGGTGAAGACAAAACATTCTTCCCCGAAGAAGTTAGCTCA
ATGGTACTCACAAAAATGAAGGAAACTGCCGAGGCATACCTTGGCAAAAC
GGTGCAGAATGCAGTAATCACGGTTCCAGCCTATTTCAATGATTCACAGA
GGCAAGCCACAAAAGATTCCGGTACCATCTCTGGCTTAAACGTTTT
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