FC878533

Overview
NameFC878533
Unique NameFC878533
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length546
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP70_AJECA (Heat shock 70 kDa protein OS=Ajellomyces capsulata GN=HSP70 PE=3 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 3.560e-73
Identity = 133/166 (80.12%), Postives = 148/166 (89.16%), Query Frame = 2
Query:   47 APAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            APAVGIDLGTTYSCVG+F+  ++EIIANDQGNRTTPS+VAFTDTERLIGDAAKNQVAMNP NT+FDAKRLIGRKF D  VQADMKH+PF +   GGKP I+V +KGE K F PEE+SSMVLTKM+ETAEAYLG TV NAV+TVPAYFNDSQRQATKD+G I+GLNV
Sbjct:    2 APAVGIDLGTTYSCVGIFRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPANTVFDAKRLIGRKFADPEVQADMKHFPFKITDKGGKPVIQVEFKGETKEFTPEEISSMVLTKMRETAEAYLGGTVNNAVVTVPAYFNDSQRQATKDAGLIAGLNV 167          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP72_PARLI (Heat shock 70 kDa protein II (Fragment) OS=Paracentrotus lividus GN=HSP70II PE=3 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 4.649e-73
Identity = 134/170 (78.82%), Postives = 151/170 (88.82%), Query Frame = 2
Query:   38 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGK-TVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN+ A NP  ++ DAKRLIGR F D  V+ADMKHWPF V+ +GG+PKIK+ +KGE KTF+ EE+SSMVL KMKETAEAYLGK +V +AV+TVPAYFNDSQRQATK+ G ISG+N+
Sbjct:    1 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNKTASNPYRSL-DAKRLIGRNFSDTNVKADMKHWPFTVIEEGGRPKIKIEFKGESKTFYAEEISSMVLLKMKETAEAYLGKESVTDAVVTVPAYFNDSQRQATKECGVISGMNI 169          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP71_PUCGR (Heat shock protein HSS1 OS=Puccinia graminis GN=HSS1 PE=3 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 4.649e-73
Identity = 132/164 (80.49%), Postives = 150/164 (91.46%), Query Frame = 2
Query:   53 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            A+GIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGD+AKNQVAMNP+NT+FDAKRLIGRKF DA VQ+D+KH+PF V   GGKP I+V Y+GEDK F PEE+SSM+LTKMKE AE+YLG TV +AV+TVPAYFNDSQRQATKD+GTISGLNV
Sbjct:    4 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDSAKNQVAMNPHNTVFDAKRLIGRKFADAEVQSDIKHFPFTVFDKGGKPYIRVQYRGEDKEFSPEEISSMILTKMKEVAESYLGGTVTSAVVTVPAYFNDSQRQATKDAGTISGLNV 167          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 272.322 bits (695), Expect = 1.036e-72
Identity = 130/166 (78.31%), Postives = 149/166 (89.76%), Query Frame = 2
Query:   47 APAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            APA+GIDLGTTYSCVG+F+  ++EIIANDQGNRTTPS+VAFTDTERLIGDAAKNQVAMNP+NT+FDAKRLIGRKF D  VQ+DMKH+PF V+   GKP I V +KGE+K F PEE+SSMVLTKM+ETAE+YLG TV NAV+TVPAYFNDSQRQATKD+G I+GLNV
Sbjct:    2 APAIGIDLGTTYSCVGIFRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPSNTVFDAKRLIGRKFADPEVQSDMKHFPFKVIDKAGKPVISVEFKGEEKQFTPEEISSMVLTKMRETAESYLGGTVNNAVVTVPAYFNDSQRQATKDAGLIAGLNV 167          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 271.937 bits (694), Expect = 1.353e-72
Identity = 132/166 (79.52%), Postives = 147/166 (88.55%), Query Frame = 2
Query:   47 APAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            APAVGIDLGTTYSCVGVF+  + EIIANDQGNRTTPS+VAFTDTERL+GDAAKNQVAMNP NT+FDAKRLIGRKF D  VQADMKH+PF V+  GGKP I+V +KGE K F PEE+S+M+L KMKETAEAYLG TV NAV+TVPAYFNDSQRQATKD+G I+GLNV
Sbjct:    2 APAVGIDLGTTYSCVGVFREDRCEIIANDQGNRTTPSFVAFTDTERLVGDAAKNQVAMNPANTVFDAKRLIGRKFSDPEVQADMKHFPFKVIDRGGKPVIQVEFKGETKVFTPEEISAMILQKMKETAEAYLGGTVNNAVVTVPAYFNDSQRQATKDAGLIAGLNV 167          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP72_SCHPO (Probable heat shock protein ssa2 OS=Schizosaccharomyces pombe GN=ssa2 PE=1 SV=3)

HSP 1 Score: 270.396 bits (690), Expect = 3.936e-72
Identity = 131/164 (79.88%), Postives = 147/164 (89.63%), Query Frame = 2
Query:   53 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            ++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+NTIFDAKRLIGRKF+D  VQ+DMKHWPF V+S  GKP ++V YKGE KTF PEE+SSMVL KM+ETAEAYLG  V +AV+TVPAYFNDSQRQATKD+G I+GLNV
Sbjct:    4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNV 167          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 3.936e-72
Identity = 132/167 (79.04%), Postives = 145/167 (86.83%), Query Frame = 2
Query:   44 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            K  A GIDLGTTYSCVGVFQHGKVEIIAN+QGNRTTPSYVAFTDTERLIG  AKNQV++NP NT+FDAKRLIGRKF D  VQADMKHWPF VVSD  KPK++V YKG++KTFFP+EVSSMVL KMKE AEAYLG  V NAVITVP+Y   SQRQATKD+G ++GLNV
Sbjct:    5 KGVAFGIDLGTTYSCVGVFQHGKVEIIANNQGNRTTPSYVAFTDTERLIGAPAKNQVSLNPQNTVFDAKRLIGRKFNDTVVQADMKHWPFKVVSDEWKPKVQVEYKGDNKTFFPDEVSSMVLIKMKEIAEAYLGHLVSNAVITVPSYLTASQRQATKDAGVLAGLNV 171          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP70_CLAHE (Heat shock 70 kDa protein OS=Cladosporium herbarum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 5.140e-72
Identity = 128/166 (77.11%), Postives = 150/166 (90.36%), Query Frame = 2
Query:   47 APAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            APA+GIDLGTTYSCVG+++  ++EIIANDQGNRTTPS+VAFTDTERLIGD+AKNQVA+NP+NT+FDAKRLIGRKF+DA VQADMKH+PF V+   GKP  +V +KGE K F PEE+SSM+LTKM+ETAE+YLG TV NAVITVPAYFNDSQRQATKD+G I+GLNV
Sbjct:    2 APAIGIDLGTTYSCVGIYRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDSAKNQVAINPHNTVFDAKRLIGRKFQDAEVQADMKHFPFKVIEKAGKPVTQVEFKGETKDFTPEEISSMILTKMRETAESYLGGTVNNAVITVPAYFNDSQRQATKDAGLIAGLNV 167          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP70_LEIAM (Heat shock 70 kDa protein OS=Leishmania amazonensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 1.145e-71
Identity = 132/165 (80.00%), Postives = 148/165 (89.70%), Query Frame = 2
Query:   53 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDG-GKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            A+GIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP+NT+FDAKRLIGRKF D  VQ+DMKHWPF V + G  KP I V Y+GE+KTF PE++SSMVL KMKETAEAYLGK V+ AV+TVPAYFNDSQRQATKD+GTISGL V
Sbjct:    6 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFNDLVVQSDMKHWPFKVTTKGDDKPVISVQYRGEEKTFTPEKISSMVLLKMKETAEAYLGKQVKKAVVTVPAYFNDSQRQATKDAGTISGLEV 170          
BLAST of FC878533 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 1.496e-71
Identity = 131/165 (79.39%), Postives = 149/165 (90.30%), Query Frame = 2
Query:   53 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFDVVSDG-GKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDSGTISGLNV 544
            A+GIDLGTTYSCVGV+Q+ +V+IIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP+NT+FDAKRLIGRKF D+ VQ+DMKHWPF V + G  KP I V Y+GE+KTF PEE+SSMVL KMKETAEAYLGK V+ AV+TVPAYFNDSQRQATKD+GTI+GL V
Sbjct:    6 AIGIDLGTTYSCVGVWQNERVDIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFNDSVVQSDMKHWPFKVTTKGDDKPMIAVQYRGEEKTFTPEEISSMVLLKMKETAEAYLGKQVKKAVVTVPAYFNDSQRQATKDAGTIAGLEV 170          
The following BLAST results are available for this feature:
BLAST of FC878533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_AJECA3.560e-7380.12Heat shock 70 kDa protein OS=Ajellomyces capsulata... [more]
HSP72_PARLI4.649e-7378.82Heat shock 70 kDa protein II (Fragment) OS=Paracen... [more]
HSP71_PUCGR4.649e-7380.49Heat shock protein HSS1 OS=Puccinia graminis GN=HS... [more]
HSP72_PARBA1.036e-7278.31Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
HSP70_NEUCR1.353e-7279.52Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]
HSP72_SCHPO3.936e-7279.88Probable heat shock protein ssa2 OS=Schizosaccharo... [more]
HSP70_PLEWA3.936e-7279.04Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]
HSP70_CLAHE5.140e-7277.11Heat shock 70 kDa protein OS=Cladosporium herbarum... [more]
HSP70_LEIAM1.145e-7180.00Heat shock 70 kDa protein OS=Leishmania amazonensi... [more]
HSP70_LEIDO1.496e-7179.39Heat shock 70 kDa protein OS=Leishmania donovani G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ5YP20RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ5YP20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878533 ID=FC878533; Name=FC878533; organism=Citrus clementina; type=EST; length=546bp
CTGATTTTACGACTGAAAATATAGTAAATTATTTAATATGGCCAAGGCAC
CCGCAGTAGGTATCGACTTGGGCACCACTTACTCGTGCGTGGGAGTATTC
CAGCACGGTAAGGTGGAGATCATCGCCAACGACCAGGGCAACAGGACTAC
ACCCTCATATGTAGCCTTCACCGATACGGAGCGTCTCATCGGAGATGCTG
CCAAGAACCAGGTTGCGATGAACCCCAACAACACCATCTTTGATGCCAAA
CGTCTTATTGGACGCAAGTTCGAAGATGCCACAGTCCAAGCTGACATGAA
ACATTGGCCTTTTGATGTCGTAAGTGATGGAGGTAAACCAAAGATCAAGG
TAGCATACAAGGGTGAAGACAAAACATTCTTCCCCGAAGAAGTTAGCTCA
ATGGTACTCACAAAAATGAAGGAAACTGCCGAGGCATACCTTGGCAAAAC
GGTGCAGAATGCAGTAATCACGGTTCCAGCCTATTTCAATGATTCACAGA
GGCAAGCCACAAAAGATTCCGGTACCATCTCTGGCTTAAACGTTTT
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