FC878537
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878537 vs. ExPASy Swiss-Prot
Match: SYSC_CANAL (Seryl-tRNA synthetase, cytoplasmic OS=Candida albicans GN=SES1 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.430e-17 Identity = 55/153 (35.95%), Postives = 84/153 (54.90%), Query Frame = 2 Query: 8 LNKINKQISQLKLFGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWG-EKRTEP-----------KLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLL 430 LN + K+I + +D +++ + ++ + + + EA +++K+ VGN+VH+SV S DE NN +VRTW E +P KL +H L+ L G D ++G I G RG++L+ GV LNQALIN+GL FL K Y L Sbjct: 56 LNSVQKEIGKRFKAKEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLRSKINQVGNIVHESVVDSQDEENNELVRTWTPENYKKPEQIAAATGAPAKLSHHEVLLRLDGY-DPERGVRIVGHRGYFLRNYGVFLNQALINYGLSFLSSKGYVPL 207
BLAST of FC878537 vs. ExPASy Swiss-Prot
Match: SYS_THEPX (Seryl-tRNA synthetase OS=Thermoanaerobacter sp. (strain X514) GN=serS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.868e-17 Identity = 53/145 (36.55%), Postives = 81/145 (55.86%), Query Frame = 2 Query: 2 NHLNKINKQISQLKLFGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRT---EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDF-LEKKSYT 424 N N + I++LK GKD S+++ + E+ + + E EV+E ++ L + N+ H+SVP+ + + +N +R WGE R EP K H E+ + L I D + A + G R + KG G RL +ALINF LD +EK YT Sbjct: 49 NRRNVESDNIAKLKREGKDASDLIAEMKELSDKIKEMEQEVKEVEEELERILWTIPNIPHESVPIGDSDEDNVEIRRWGEPRKFDFEP--KPHWEIGQELDILDFEAAARVTGSRFTFYKGLGARLERALINFMLDLHIEKHGYT 191
BLAST of FC878537 vs. ExPASy Swiss-Prot
Match: SYS_THEP3 (Seryl-tRNA synthetase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=serS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.868e-17 Identity = 53/145 (36.55%), Postives = 81/145 (55.86%), Query Frame = 2 Query: 2 NHLNKINKQISQLKLFGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRT---EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDF-LEKKSYT 424 N N + I++LK GKD S+++ + E+ + + E EV+E ++ L + N+ H+SVP+ + + +N +R WGE R EP K H E+ + L I D + A + G R + KG G RL +ALINF LD +EK YT Sbjct: 49 NRRNVESDNIAKLKREGKDASDLIAEMKELSDKIKEMEQEVKEVEEELERILWTIPNIPHESVPIGDSDEDNVEIRRWGEPRKFDFEP--KPHWEIGQELDILDFEAAARVTGSRFTFYKGLGARLERALINFMLDLHIEKHGYT 191
BLAST of FC878537 vs. ExPASy Swiss-Prot
Match: SYS_HALOH (Seryl-tRNA synthetase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=serS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.868e-17 Identity = 48/139 (34.53%), Postives = 80/139 (57.55%), Query Frame = 2 Query: 11 NKINKQISQLKLFGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRT-EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYT 424 N ++ +I +LK G+D S+++ + E+ + E+R ++ + + N+ HDSVPV DE +N VR WGE R + + K H +L E L I D ++G+ ++G R +LKG G RL ++LI+F +D + YT Sbjct: 52 NVVSSKIGELKRAGEDASDIIAEMKEVSATIKKYDEELRGIEERLQQVVLSIPNMPHDSVPVGEDEDDNVEVRRWGEPRKFDFEFKPHWDLGEALDILDFERGSKVSGARFTFLKGAGARLERSLISFMIDHHTQNGYT 190
BLAST of FC878537 vs. ExPASy Swiss-Prot
Match: SYS_GEOSW (Seryl-tRNA synthetase OS=Geobacillus sp. (strain WCH70) GN=serS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.868e-17 Identity = 50/136 (36.76%), Postives = 77/136 (56.62%), Query Frame = 2 Query: 2 NHLNKINKQISQLKLFGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRT---EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLD 400 N N++++QI+ LK KD ++ + ++ + + E+R+ + A L + N+ H+SVPV E +N VR WGE R+ EP K H ++ E LGI D ++ A + G R + KG G RL +ALINF LD Sbjct: 50 NKRNEVSQQIAVLKREKKDADHLIAEMRDVGDRIKTMDDEIRQVEEELNALLLSIPNIPHESVPVGKSEEDNVEVRKWGEPRSFSFEP--KPHWDIAEQLGILDFERAAKVTGSRFVFYKGLGARLERALINFMLD 183
BLAST of FC878537 vs. ExPASy Swiss-Prot
Match: SYS_UNCMA (Seryl-tRNA synthetase OS=Uncultured methanogenic archaeon RC-I GN=serS PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.161e-17 Identity = 48/139 (34.53%), Postives = 82/139 (58.99%), Query Frame = 2 Query: 11 NKINKQISQLKLFGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEK-RTEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYT 424 N+I+++I++ + GKD S ++ + +I +Q + E E+ E+ V L + N++ DSVPV D+ N V+ WGE + + ++KNH L G AD ++ A +AG ++LKG+ V L+ AL F +D L K+ +T Sbjct: 55 NEISREINEARKAGKDTSALMAEARDIPRQIKEAETEMEESRNKVHYYLMRLPNILDDSVPVGKDDTENVEVKRWGEPVQKDFEIKNHGLLAVEHGWADFERAAKVAGAGFYFLKGNMVLLDMALQRFAMDLLVKRGFT 193
BLAST of FC878537 vs. ExPASy Swiss-Prot
Match: SYS_PELTS (Seryl-tRNA synthetase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=serS PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.435e-17 Identity = 49/134 (36.57%), Postives = 77/134 (57.46%), Query Frame = 2 Query: 2 NHLNKINKQISQLKLFGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRTEP-KLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLD 400 N N ++++I +LK GKD EMV + ++ +Q + + E++E ++ L + N+ H+SVP A N +VRTWG+ R + H E+ E L I D ++G +AG R + KG G RL +A+INF LD Sbjct: 49 NRRNVVSEEIGRLKKSGKDAPEMVLEMRDLSRQIKEIDEEIKELDGRLQDMLLNIPNIPHESVPEGAGAAENPVVRTWGKPRDFGFTPRPHWEIGEQLDIIDFERGGKVAGARFSFYKGYGARLERAVINFMLD 182
BLAST of FC878537 vs. ExPASy Swiss-Prot
Match: SYSC_YEAST (Seryl-tRNA synthetase, cytoplasmic OS=Saccharomyces cerevisiae GN=SES1 PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 5.435e-17 Identity = 54/148 (36.49%), Postives = 78/148 (52.70%), Query Frame = 2 Query: 11 NKINKQISQLKLFGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRTE-----------PKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSY 421 NK+ K I +D S ++ + ++ QQ + + ++ +K K+ VGN+VH SV VSNDE NN +VRTW + E P +H E++ L D +G I G RG++ + GV LNQALIN+GL FL K Y Sbjct: 57 NKLQKDIGLKFKNKEDASGLLAEKEKLTQQKKELTEKEQQEDKDLKKKVFQVGNIVHPSVVVSNDEENNELVRTWKPEDLEAVGPIASVTGKPASLSHHEILLRLDGYDPDRGVKICGHRGYFFRNYGVFLNQALINYGLQFLAAKGY 204
BLAST of FC878537 vs. ExPASy Swiss-Prot
Match: SYS_DESRM (Seryl-tRNA synthetase OS=Desulfotomaculum reducens (strain MI-1) GN=serS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.098e-17 Identity = 49/134 (36.57%), Postives = 76/134 (56.72%), Query Frame = 2 Query: 2 NHLNKINKQISQLKLFGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKR-TEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLD 400 N N ++++I +LK G+D E + ++ Q+ D + E+R ++ L + N+ H+SVPV DE +N +R WG+ R E + K H +L E L I D ++G + G R + KG G RL +ALINF LD Sbjct: 49 NTRNVVSQEIGKLKKAGQDAEEKTLEMRKVSQKIKDMDDEIRNIEEKLQEILLSIPNIPHESVPVGKDENDNVEIRRWGKPRGFEFEPKPHWDLGEDLNILDFERGGKVTGARFSFYKGMGARLERALINFMLD 182
BLAST of FC878537 vs. ExPASy Swiss-Prot
Match: SYS_CENSY (Seryl-tRNA synthetase OS=Cenarchaeum symbiosum GN=serS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.270e-17 Identity = 48/140 (34.29%), Postives = 74/140 (52.86%), Query Frame = 2 Query: 11 NKINKQISQLKLFGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRTEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLL 430 N +Q++Q K G D + + + ++ ++ E E + A + + N++ SVP DE N ++R W T K H EL G+ D+K+ A ++G R +YLKG VRLNQALI+ LDFL + YTL+ Sbjct: 52 NFAGRQVAQFKRDGVDTTAAIKEMKDLSEKLYQAEGEQQSAESEYLELAWTIPNMIDKSVPRGPDETANVVLRKWVGTPTPSVPKGHEELAVGRGLLDMKRAAKVSGARFYYLKGSLVRLNQALISHSLDFLGSRGYTLV 191 The following BLAST results are available for this feature:
BLAST of FC878537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 292
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878537 ID=FC878537; Name=FC878537; organism=Citrus clementina; type=EST; length=580bpback to top |