FC878537
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878537 vs. ExPASy Swiss-Prot
Match: SYS_CAMFF (Seryl-tRNA synthetase OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=serS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.927e-11 Identity = 44/142 (30.99%), Postives = 70/142 (49.30%), Query Frame = 2 Query: 11 NKINKQISQLKLFGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRT-EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLH 433 N +K++ L G D + + T+ E K+ V E + V N++ D VP+ D+ +N ++T E R K H EL E LG D GA ++G R L+ DG RL++AL+NF +DF + + L++ Sbjct: 53 NAKSKEVGILARSGADTTLLKTELEENKKLMQTASNLVSELETKLDTVASRVPNVIDDDVPLGKDDNDNVCIKTILEPREFNFTPKEHFELGENLGWLDFATGAKLSGSRFTVLRSDGARLSRALVNFMIDFNTARGFELVN 194
BLAST of FC878537 vs. ExPASy Swiss-Prot
Match: SYS_BDEBA (Seryl-tRNA synthetase OS=Bdellovibrio bacteriovorus GN=serS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.927e-11 Identity = 42/131 (32.06%), Postives = 67/131 (51.15%), Query Frame = 2 Query: 11 NKINKQISQLKLFGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWG-EKRTEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLD 400 NK++ +I ++K G D S ++ + + +K Q + E + EA V V+ N H SVPV + E +N ++ G + K K H EL E L I D ++ G R +LKG ++ +ALI F +D Sbjct: 60 NKLSGEIGKIKREGGDASAILAEVDVLKTQVKELEAKAAEADQQVTNLALVIPNKPHSSVPVGSSEKDNKEIKVVGTPTQFSFKAKEHWELGEALNIIDFERAGKTTGTRFAFLKGAAAQMERALIQFMMD 190 The following BLAST results are available for this feature:
BLAST of FC878537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 292
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878537 ID=FC878537; Name=FC878537; organism=Citrus clementina; type=EST; length=580bpback to top |