FC878553

Overview
NameFC878553
Unique NameFC878553
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length838
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878553 vs. ExPASy Swiss-Prot
Match: GDL28_ARATH (GDSL esterase/lipase At1g71250 OS=Arabidopsis thaliana GN=At1g71250 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.447e-37
Identity = 84/233 (36.05%), Postives = 132/233 (56.65%), Query Frame = 1
Query:  145 FVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLHDLGARRVLVTGTGPLGCVPAERAMRGRN--GQCAADLXRAADLYNPQLVQLVKDLN 837
            FV GDSLVD GNNN+L T ARA+  PYGID    +PTGRFSNGL   D +++ +      P+  P  +G+R+L G N+ASA  GIL+ +G  +     + +Q    +   +++  ++ PQ     +  +L+++  G ND++NNY +      S +F  PD+   ++S+Y + L  L+ LG R++ + G  PLGC+P +RA RG +   +C   + +    +N  L  LV  LN
Sbjct:   43 FVLGDSLVDAGNNNFLQTVARANFLPYGIDM-NYQPTGRFSNGLTFIDLLARLLEIPSPPPFADPTTSGNRILQGVNYASAAAGILDVSGYNYGGRFSLNQQMVNLETTLSQLRTMMSPQNFTDYLARSLVVLVFGSNDYINNYLMPNLYDSSIRFRPPDFANLLLSQYARQLLTLYSLGLRKIFIPGVAPLGCIPNQRA-RGISPPDRCVDSVNQILGTFNQGLKSLVDQLN 273          
BLAST of FC878553 vs. ExPASy Swiss-Prot
Match: GDL23_ARATH (GDSL esterase/lipase At1g58430 OS=Arabidopsis thaliana GN=At1g58430 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.452e-37
Identity = 88/230 (38.26%), Postives = 130/230 (56.52%), Query Frame = 1
Query:  148 VFGDSLVDNGNNNYLATTA-RADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPTLP-YLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLHDLGARRVLVTGTGPLGCVPAERAMRGRN--GQCAADLXRAADLYNPQLVQLV 825
            +FGDS VD GNNNY + T  RA   PYGID P   P GRFSNG    D I+  +  +  +P +L P LT   ++ G  FASAG G  + T +     IR+  Q   F+ Y  R+ +++G ++  +++N AL++++ G NDF+ NYY VP S R    S+ DY  +V+S     +  L+ LG R++LV G  P+GC+P +   + RN    C     R + LYN +L +L+
Sbjct:   38 IFGDSTVDTGNNNYPSQTIFRAKHVPYGIDLPNHSPNGRFSNGKIFSDIIATKLNIKQFVPPFLQPNLTDQEIVTGVCFASAGAGYDDQTSLT-TQAIRVSEQPNMFKSYIARLKSIVGDKKAMKIINNALVVVSAGPNDFILNYYEVP-SWRRMYPSISDYQDFVLSRLNNFVKELYSLGCRKILVGGLPPMGCLPIQMTAQFRNVLRFCLEQENRDSVLYNQKLQKLL 265          
BLAST of FC878553 vs. ExPASy Swiss-Prot
Match: GDL37_ARATH (GDSL esterase/lipase At2g19060 OS=Arabidopsis thaliana GN=At2g19060 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.120e-37
Identity = 87/232 (37.50%), Postives = 128/232 (55.17%), Query Frame = 1
Query:  142 FFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLHDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLXRAADLYNPQLVQLVKDLN 837
            +FVFGDS+ DNGNNN L T A+ +  PYGID+  R PTGRFSNG NIPDFI++ +     +P  +   T  +   G N+AS G G+L +T       I   +Q    ++    +TA + P++ K+     L  I +G ND++NNY++      +  FS  +Y  ++I  YR  L  L+ LGAR+V V G   LGC P   A  G    CA ++ +A + +N +L  L+ + N
Sbjct:   31 YFVFGDSVFDNGNNNELDTLAKVNYSPYGIDF-ARGPTGRFSNGRNIPDFIAEELRISYDIPPFTRAST-EQAHTGINYASGGAGLLEETSQHLGERISFEKQITNHRKMI--MTAGVPPEKLKK----CLYTINIGSNDYLNNYFMPAPYTTNENFSFDEYADFLIQSYRSYLKSLYVLGARKVAVFGVSKLGCTPRMIASHGGGKGCATEVNKAVEPFNKKLKDLISEFN 254          
BLAST of FC878553 vs. ExPASy Swiss-Prot
Match: GDL14_ARATH (GDSL esterase/lipase At1g29660 OS=Arabidopsis thaliana GN=At1g29660 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.120e-37
Identity = 86/234 (36.75%), Postives = 134/234 (57.26%), Query Frame = 1
Query:  142 FFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTK-QLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLHDLGARRVLVTGTGPLGCVPAERAMRGRNG-QCAADLXRAADLYNPQLVQLVKDLN 837
            +F+FGDSLVDNGNNN L + ARAD  PYGID+    PTGRFSNG    D +++ +G +  +P  S  ++G  +L G N+ASA  GI  +TG Q    I    Q E ++    +V  ++G + T    +   +  + +G ND++NNY++  + + SRQ++   Y   +IS YR  L  L++ GAR+  + G G +GC P   A   ++G  C   +  A  ++N +L+ +V+ LN
Sbjct:   33 YFIFGDSLVDNGNNNRLRSIARADYFPYGIDFGG--PTGRFSNGRTTVDVLTELLGFDNYIPAYST-VSGQEILQGVNYASAAAGIREETGAQLGQRITFSGQVENYKNTVAQVVEILGDEYTAADYLKRCIYSVGMGSNDYLNNYFMPQFYSTSRQYTPEQYADDLISRYRDQLNALYNYGARKFALVGIGAIGCSPNALAQGSQDGTTCVERINSANRIFNNRLISMVQQLN 263          
BLAST of FC878553 vs. ExPASy Swiss-Prot
Match: GDL86_ARATH (GDSL esterase/lipase At5g45960 OS=Arabidopsis thaliana GN=At5g45960 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 9.299e-37
Identity = 79/196 (40.31%), Postives = 119/196 (60.71%), Query Frame = 1
Query:  148 VFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIG-SEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLHDLGARRVLVTGTGPLGCVP 732
            VFGDS VD GNNNY+ T  + + PPYG+D+  + PTGRF NG  + DFI+ +IG  E   PYL P L  + L+ G +FASAG G  +       N+I +  Q EYF+EY+ ++   +G Q  ++ +  A+  ++ G NDFV NY+ +P   R + F++  Y ++VIS  ++ +  L   GAR++ V G  P+GC+P
Sbjct:   50 VFGDSTVDPGNNNYIDTVFKCNFPPYGLDFRNKTPTGRFCNGRLVTDFIASYIGVKENVPPYLDPNLGINELISGVSFASAGSG-YDPLTPTITNVIDIPTQLEYFREYKRKLEGKMGKQEMEKHIEEAMFCVSAGTNDFVINYFTIP--IRRKTFTIEAYQQFVISNLKQFIQGLWKEGARKITVAGLPPIGCLP 242          
BLAST of FC878553 vs. ExPASy Swiss-Prot
Match: GDL31_ARATH (GDSL esterase/lipase At1g74460 OS=Arabidopsis thaliana GN=At1g74460 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.214e-36
Identity = 87/232 (37.50%), Postives = 129/232 (55.60%), Query Frame = 1
Query:  145 FVFGDSLVDNGNNNYLATT-ARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPTLPYLSPELTGSRLLV-GANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLHDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLXRAADLYNPQLVQLVKDL 834
            F+FGDSL D GNN  L  + A A+ P YGID+    P GRF+NG  + D I   IG    + +L P +    +L  G N+AS G GILN+TG  F+    +++Q E FQ  Q+ V A IG +   +    A  ++ +G NDF+NN YL+P  + S +++   +V Y++      L  LH LGAR+++V G GP+GC+P +RA+   +G C       A  +N     ++ DL
Sbjct:   25 FIFGDSLSDVGNNKNLPRSLATANLPFYGIDFGNGLPNGRFTNGRTVSDIIGDKIGLPRPVAFLDPSMNEDVILENGVNYASGGGGILNETGGYFIQRFSLWKQIELFQGTQDVVVAKIGKKEADKFFQDARYVVALGSNDFINN-YLMPVYSDSWKYNDQTFVDYLMETLESQLKVLHSLGARKLMVFGLGPMGCIPLQRAL-SLDGNCQNKASNLAKRFNKAATTMLLDL 254          
BLAST of FC878553 vs. ExPASy Swiss-Prot
Match: GDL36_ARATH (GDSL esterase/lipase At2g19050 OS=Arabidopsis thaliana GN=At2g19050 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.706e-36
Identity = 89/235 (37.87%), Postives = 130/235 (55.32%), Query Frame = 1
Query:  142 FFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPTLPYL---SPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLHDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLXRAADLYNPQLVQLVKDLN 837
            +FVFGDS+ DNGNNN L T+A+ +  PYGID+  R PTGRFSNG NIPD I++ +     +P     SPE    +  +G N+AS G GI  +T      II   +Q +      N  + ++  +  ++ +N  L  I +G ND++NNY++      +++FS  +Y   +I  YR  L  L+ LGAR+V V G   LGC P   A  G    CAA++ +A + +N  L  LV + N
Sbjct:   32 YFVFGDSVFDNGNNNVLNTSAKVNYSPYGIDF-ARGPTGRFSNGRNIPDIIAELMRFSDYIPPFTGASPE----QAHIGINYASGGGGIREETSQHLGEIISFKKQIK------NHRSMIMTAKVPEEKLNKCLYTINIGSNDYLNNYFMPAPYMTNKKFSFDEYADSLIRSYRSYLKSLYVLGARKVAVFGVSKLGCTPRMIASHGGGNGCAAEVNKAVEPFNKNLKALVYEFN 255          
BLAST of FC878553 vs. ExPASy Swiss-Prot
Match: GDL1_ARATH (GDSL esterase/lipase At1g06990 OS=Arabidopsis thaliana GN=At1g06990 PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 6.028e-36
Identity = 75/201 (37.31%), Postives = 123/201 (61.19%), Query Frame = 1
Query:  148 VFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPTL-PYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLHDLGARRVLVTGTGPLGCVPAERAM 747
            VFGDS +D GNNNY+ T  RA+ PPYG ++P    TGRFSNG  IPDFI+  +G + T+ P+L P L+ S ++ G  FASAG G  N T  +  + + + +Q +  + Y  R++ ++G ++   +V+ AL++++ G NDF  N Y  P  +R ++  +  Y  +++S     +  L+D+G R+++V G  P+GC+P +  M
Sbjct:   40 VFGDSTIDTGNNNYIKTYIRANFPPYGCNFPGHNATGRFSNGKLIPDFIASLMGIKDTVPPFLDPHLSDSDIITGVCFASAGSGYDNLTD-RATSTLSVDKQADMLRSYVERLSQIVGDEKAASIVSEALVIVSSGTNDFNLNLYDTP--SRRQKLGVDGYQSFILSNVHNFVQELYDIGCRKIMVLGLPPVGCLPIQMTM 237          
BLAST of FC878553 vs. ExPASy Swiss-Prot
Match: GDL29_ARATH (GDSL esterase/lipase At1g71691 OS=Arabidopsis thaliana GN=At1g71691 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.028e-35
Identity = 90/232 (38.79%), Postives = 137/232 (59.05%), Query Frame = 1
Query:  145 FVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALI-GPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLHDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLXRAADLYNPQLVQLVKDLN 837
            FVFGDSL+DNGNNN + + A+A+  PYGID+    PTGRF NGL + D I+Q +G  P +P  S E TG ++L G N+ASA  GIL DTG  FV  I   +Q   F+   ++V +   G       V  +L  I +G ND++NN YL+P      Q++   +   ++  Y   LTRL++LG R+ +V G G +GC+P+  A +G +G+C+ ++ +    +N  +  ++ +LN
Sbjct:   57 FVFGDSLIDNGNNNNIPSFAKANYFPYGIDF-NGGPTGRFCNGLTMVDGIAQLLGL-PLIPAYS-EATGDQVLRGVNYASAAAGILPDTGGNFVGRIPFDQQIHNFETTLDQVASKSGGAVAIADSVTRSLFFIGMGSNDYLNN-YLMPNFPTRNQYNSQQFGDLLVQHYTDQLTRLYNLGGRKFVVAGLGRMGCIPSILA-QGNDGKCSEEVNQLVLPFNTNVKTMISNLN 283          
BLAST of FC878553 vs. ExPASy Swiss-Prot
Match: GDL68_ARATH (GDSL esterase/lipase At4g30140 OS=Arabidopsis thaliana GN=At4g30140 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.907e-35
Identity = 90/232 (38.79%), Postives = 129/232 (55.60%), Query Frame = 1
Query:  142 FFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLHDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLXRAADLYNPQLVQLVKDLN 837
            +FVFGDS+ DNGNNN L T A+ +  PYGIDY  + PTGRFSNG NIPD I++  G    +P  +   + ++  +G N+AS   GI  +T       I + +Q      +   +TA +   R +Q     L  I +G ND++NNY+L P +   R F+   Y + +IS YR  LT+L+ LGAR V + G G +GC P   A  G    CA ++ +A  ++N +L  LV D N
Sbjct:   34 YFVFGDSVFDNGNNNALNTKAKVNYLPYGIDY-FQGPTGRFSNGRNIPDVIAELAGFNNPIPPFAGA-SQAQANIGLNYASGAGGIREETSENMGERISLRQQVN--NHFSAIITAAVPLSRLRQ----CLYTINIGSNDYLNNYFLSPPTLARRLFNPDQYARSLISLYRIYLTQLYVLGARNVALFGIGKIGCTPRIVATLGGGTGCAEEVNQAVIIFNTKLKALVTDFN 257          
The following BLAST results are available for this feature:
BLAST of FC878553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
GDL28_ARATH2.447e-3736.05GDSL esterase/lipase At1g71250 OS=Arabidopsis thal... [more]
GDL23_ARATH5.452e-3738.26GDSL esterase/lipase At1g58430 OS=Arabidopsis thal... [more]
GDL37_ARATH7.120e-3737.50GDSL esterase/lipase At2g19060 OS=Arabidopsis thal... [more]
GDL14_ARATH7.120e-3736.75GDSL esterase/lipase At1g29660 OS=Arabidopsis thal... [more]
GDL86_ARATH9.299e-3740.31GDSL esterase/lipase At5g45960 OS=Arabidopsis thal... [more]
GDL31_ARATH1.214e-3637.50GDSL esterase/lipase At1g74460 OS=Arabidopsis thal... [more]
GDL36_ARATH2.706e-3637.87GDSL esterase/lipase At2g19050 OS=Arabidopsis thal... [more]
GDL1_ARATH6.028e-3637.31GDSL esterase/lipase At1g06990 OS=Arabidopsis thal... [more]
GDL29_ARATH1.028e-3538.79GDSL esterase/lipase At1g71691 OS=Arabidopsis thal... [more]
GDL68_ARATH3.907e-3538.79GDSL esterase/lipase At4g30140 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA73AH09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA73AH09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878553 ID=FC878553; Name=FC878553; organism=Citrus clementina; type=EST; length=838bp
CACAGCAAGCTTAGATTTTCTAGGATTCGCGTTAAATATAATACAATGGC
AAGCTCATTTGTTTTTGGTGTACGGACAATTTTAGGTCTTGTGATGGCAT
TGGGAGCTTTGGCTCCTCAAGCTGCGGAGGCCGCTCGTGCTTTCTTTGTG
TTTGGTGATTCACTTGTTGACAATGGCAACAATAACTACTTGGCCACCAC
TGCTCGGGCTGATTCTCCACCGTACGGCATTGATTATCCGACTCGCCGAC
CCACAGGAAGATTCTCCAATGGCCTAAACATTCCTGATTTCATCAGTCAG
CACATTGGTTCGGAGCCCACATTGCCGTATTTGAGTCCAGAGCTCACTGG
GTCTAGACTACTTGTTGGAGCCAATTTTGCTTCTGCTGGAATTGGAATAC
TCAATGACACAGGAATTCAATTTGTAAACATAATTAGAATGTTCAGGCAA
TTCGAATACTTCCAAGAATATCAGAACCGGGTTACAGCTTTAATCGGACC
GCAGCGGACTAAGCAACTTGTTAATGGAGCACTCATCCTCATCACTGTCG
GTGGCAATGACTTTGTCAATAACTATTACTTGGTTCCCTACTCTGCAAGA
TCTCGTCAGTTTTCTCTACCGGATTACGTCAAATATGTCATCTCCGAGTA
CAGAAAACTTTTAACGAGGCTACACGACCTTGGAGCAAGAAGGGTTTTGG
TTACCGGAACCGGGCCGTTGGGGTGTGTTCCGGCAGAGCGAGCTATGCGG
GGCAGAAATGGACAGTGCGCTGCTGATCTTNCACGAGCTGCCGATTTGTA
TAATCCTCAACTTGTTCAATTGGTTAAAGATCTGAATA
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