FC878624
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: ABCG3_DICDI (ABC transporter G family member 3 OS=Dictyostelium discoideum GN=abcG3 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.633e-16 Identity = 42/121 (34.71%), Postives = 74/121 (61.16%), Query Frame = 3 Query: 396 LLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDE 758 LLN+IS + G ++ ++G G+GKS L+ L NR+ K ++G +K N ++ + + +V QDD +LTV ETL F+A+ + +S+ ++ RV ++DQLGL + + T+IG++ Sbjct: 126 LLNNISFTMKPGRMILLMGIPGAGKSLLLKVLGNRLGKGKIEGELKFNNHEVDETTHQRDTIFVSQDDRHIALLTVRETLEFSAKCNMGENVSQEEQSERVDLVLDQLGLSHTSNTIIGNQ 246 HSP 2 Score: 73.1738 bits (178), Expect = 1.997e-12 Identity = 42/122 (34.43%), Postives = 68/122 (55.74%), Query Frame = 3 Query: 387 TKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIG 752 T LL D++G G + A++G SG+GKSTL+D LA R ++ G I++NG++++ + + YV Q D+L LTV E + F+A RLP + + + + ++ L L T IG Sbjct: 808 TLELLKDVNGFIVPG-MCALMGPSGAGKSTLMDVLAKRKNVGTITGDIRINGQLVKDMNITRFTGYVEQQDILSANLTVREAIEFSANCRLPSSYLQKDRVKLIDEILSVLSLTKMQNTTIG 928
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: YO075_YEAST (Uncharacterized ABC transporter ATP-binding protein/permease YOL075C OS=Saccharomyces cerevisiae GN=YOL075C/YOL074C PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 8.663e-16 Identity = 59/153 (38.56%), Postives = 83/153 (54.25%), Query Frame = 3 Query: 381 SKTKT-LLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGE---VLESR---------------------MLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEGH 764 SKT T L+N S + G +MAV+G SGSGK+TL++ LA++I+ G + NG VLE VI AY+ Q D+L P LT ETL FAA+ +L S+ KK+ V+ LI++LGL++ A T++GD H Sbjct: 38 SKTNTTLVNTFSMDLPSGSVMAVMGGSGSGKTTLLNVLASKIS-----GGLTHNGSIRYVLEDTGSEPNETEPKRAHLDGQDHPIQKHVIMAYLPQQDVLSPRLTCRETLKFAADLKL--NSSERTKKLMVEQLIEELGLKDCADTLVGDNSH 183 HSP 2 Score: 77.7962 bits (190), Expect = 8.108e-14 Identity = 49/135 (36.30%), Postives = 77/135 (57.04%), Query Frame = 3 Query: 372 NLFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRI-----AKESLKGTIKLNGEVLESRMLKVISAYVMQ-DDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDE 758 N +TK +L ++ + G I A++G SGSGKS+L++ ++ R+ AK G+I N + M K + +YV Q DD L LTV+ETL +AA RL L+++++ R LI LGL++ +IG+E Sbjct: 701 NFHHETKEILQSVNAIFKPGMINAIMGPSGSGKSSLLNLISGRLKSSVFAKFDTSGSIMFNDIQVSELMFKNVCSYVSQDDDHLLAALTVKETLKYAAALRL-HHLTEAERMERTDNLIRSLGLKHCENNIIGNE 834
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: WHT3_CAEEL (ABC transporter ATP-binding protein/permease wht-3 OS=Caenorhabditis elegans GN=wht-3 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.663e-16 Identity = 53/133 (39.85%), Postives = 81/133 (60.90%), Query Frame = 3 Query: 369 ENLFSKT-KTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLK-GTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEG 761 + LFSK K LLN +SG A+ GE++A++GASG+GK+TL++ L R K K GT+K+NG + + + +IS + Q ++ P LTV+E LM A R+ +K ++ RV +I+ L L+N IG G Sbjct: 46 KKLFSKKQKQLLNRVSGIAKPGEMVALMGASGAGKTTLMNVLMCRNMKGLEKNGTVKVNGTKI-GKEISLISGFAQQQEIFIPTLTVDEYLMIQARLRM--KANKHTRRERVDEIIEMLRLQNCRDLKIGTPG 175
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: ABCG2_BOVIN (ATP-binding cassette sub-family G member 2 OS=Bos taurus GN=ABCG2 PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 8.663e-16 Identity = 62/190 (32.63%), Postives = 96/190 (50.53%), Query Frame = 3 Query: 201 VSDTSSVETRSLP--FVLSFNNLTYSVKARRKSITLPAVFRRQPHPLGAVTATDPVPGENLFSKT--KTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDE 758 + +T+S + ++L VLSF+N+ Y VK + G L KT K +L +I+G + G + A+LG +G GKS+L+D LA R L G + +NG + K S YV+QDD++ LTV E L F+A RLP T++ +K R+ +I +LGL A + +G + Sbjct: 19 IPETTSKDLQTLTEGAVLSFHNICYRVKVKT--------------------------GFLLCRKTIEKEILANINGVMKPG-LNAILGPTGGGKSSLLDILAARKDPHGLSGDVLINGAPRPANF-KCNSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMTSYEKNERINKVIQELGLDKVADSKVGTQ 180
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: ABCG2_DICDI (ABC transporter G family member 2 OS=Dictyostelium discoideum GN=abcG2 PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.131e-15 Identity = 48/119 (40.34%), Postives = 73/119 (61.34%), Query Frame = 3 Query: 396 LLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIG 752 LLN+I+G + G ++A++G SG+GKSTL+D LANR KG I +NG+ ++ +SAYV Q D+L P TV+E ++F+A+ RLP + +K V+ +I+ L L IG Sbjct: 737 LLNEINGYVKPGMLLALMGPSGAGKSTLLDVLANRKTGGHTKGQILINGQE-RTKYFTRLSAYVEQFDVLPPTQTVKEAILFSAKTRLPSDMPNEEKIKFVENIIETLNLLKIQNKQIG 854 HSP 2 Score: 72.0182 bits (175), Expect = 4.449e-12 Identity = 37/123 (30.08%), Postives = 69/123 (56.10%), Query Frame = 3 Query: 390 KTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDE 758 + +L+D++ + G ++ +LG+ G GK++++ ALAN++ E++ G++ NG+ AYV+Q D TV ET F+A+ ++ S+ +K RV ++ L L TV+G+E Sbjct: 71 RNILSDLNFFLKPGSMVLILGSPGCGKTSVMKALANQLHSETVSGSLLFNGKAANKSTHHRDVAYVVQGDHHMAPFTVRETFKFSADLQMSEGTSEEEKNARVDYILKTLDLTRQQDTVVGNE 193
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: WBC30_ARATH (Putative white-brown complex homolog protein 30 OS=Arabidopsis thaliana GN=WBC30 PE=2 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.478e-15 Identity = 45/126 (35.71%), Postives = 74/126 (58.73%), Query Frame = 3 Query: 375 LFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIG 752 L K K +L ++G+ G + AV+G SG+GK+T + ALA + + G I +NG K I+ +V QDD++ LTVEE L F+A RL +SK+ K + ++ +I+ LGL++ +++G Sbjct: 474 LKGKHKHILRSVTGKIMPGRVSAVMGPSGAGKTTFLSALAGKATGCTRTGLILINGRNDSINSYKKITGFVPQDDVVHGNLTVEENLRFSARCRLSAYMSKADKVLIIERVIESLGLQHVRDSLVG 599
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: CDR3_CANAL (Opaque-specific ABC transporter CDR3 OS=Candida albicans GN=CDR3 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.478e-15 Identity = 48/128 (37.50%), Postives = 76/128 (59.38%), Query Frame = 3 Query: 381 SKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESL-KGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEG 761 S+ + +LN+I G + GE+ A++GASG+GK+TL++AL+ R+ + GT +NG L+S + I YV Q DL TV E L F+A R P ++S ++K V+ +ID L +R ++G G Sbjct: 853 SEERVILNNIDGWVKPGEVTALMGASGAGKTTLLNALSERLTTGVITSGTRMVNGGELDSSFQRSI-GYVQQQDLHLETSTVREALKFSARLRQPNSVSIAEKDSYVEKIIDLLEMRTYVDAIVGVPG 979
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: ABCG2_PIG (ATP-binding cassette sub-family G member 2 OS=Sus scrofa GN=ABCG2 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.478e-15 Identity = 58/185 (31.35%), Postives = 95/185 (51.35%), Query Frame = 3 Query: 204 SDTSSVETRSLPFVLSFNNLTYSVKARRKSITLPAVFRRQPHPLGAVTATDPVPGENLFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDE 758 S ++ ++T + VLSF+++ Y VK + + F R+ + K +L +I+G + G + A+LG +G GKS+L+D LA R L G + +NG + K S YV+QDD++ LTV E L F+A RLP T++ +K R+ +I +LGL A + +G + Sbjct: 23 SSSNELKTSAGGAVLSFHDICYRVKVKSGFL-----FCRK-------------------TVEKEILTNINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPHGLSGDVLINGAPRPANF-KCNSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMTNHEKNERINMVIQELGLDKVADSKVGTQ 181
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: PDR13_ORYSJ (Pleiotropic drug resistance protein 13 OS=Oryza sativa subsp. japonica GN=PDR13 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.930e-15 Identity = 45/126 (35.71%), Postives = 75/126 (59.52%), Query Frame = 3 Query: 384 KTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEG 761 K LL+++SG R + A++GASGSGK+TL+D LA R ++G I+++G E R I+ YV Q+D+ P +TVEE+L F++ RLP +S+ + V+ ++ + L ++G +G Sbjct: 861 KRLQLLSEVSGIFRPRVLTALVGASGSGKTTLMDVLAGRKTGGYIEGDIRISGHKKEQRTFARIAGYVEQNDIHSPQVTVEESLWFSSTLRLPNDISRETRHAFVEEVMALVELDQIRYALVGKQG 986
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: ABCG2_HUMAN (ATP-binding cassette sub-family G member 2 OS=Homo sapiens GN=ABCG2 PE=1 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 1.930e-15 Identity = 57/172 (33.14%), Postives = 87/172 (50.58%), Query Frame = 3 Query: 243 VLSFNNLTYSVKARRKSITLPAVFRRQPHPLGAVTATDPVPGENLFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDE 758 VLSF+N+ Y VK + G + PV K +L++I+G + G + A+LG +G GKS+L+D LA R L G + +NG + K S YV+QDD++ LTV E L F+A RL T++ +K R+ +I +LGL A + +G + Sbjct: 36 VLSFHNICYRVKLKS----------------GFLPCRKPVE--------KEILSNINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPSGLSGDVLINGAPRPANF-KCNSGYVVQDDVVMGTLTVRENLQFSAALRLATTMTNHEKNERINRVIQELGLDKVADSKVGTQ 181 The following BLAST results are available for this feature:
BLAST of FC878624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 113
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878624 ID=FC878624; Name=FC878624; organism=Citrus clementina; type=EST; length=819bpback to top |