FC878624
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: PDR1_ORYSJ (Probable pleiotropic drug resistance protein 1 OS=Oryza sativa subsp. japonica GN=PDR1 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 39/122 (31.97%), Postives = 72/122 (59.02%), Query Frame = 3 Query: 396 LLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEG 761 LL +SG R G + A++G SG+GK+TL+D LA R ++G I ++G + +S Y Q+D+ P +TV E+L+F+A RLP+ + + +K+ ++ +++ + L+ ++G G Sbjct: 898 LLKGVSGCFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGNISISGYPKKQETFARVSGYCEQNDIHSPQVTVSESLLFSAWLRLPKDVDSNTRKMFIEEVMELVELKPLRDALVGLPG 1019
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: PDH1_CANGA (ATP-binding cassette transporter CGR1 OS=Candida glabrata GN=PDH1 PE=3 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 43/127 (33.86%), Postives = 71/127 (55.91%), Query Frame = 3 Query: 381 SKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEG 761 ++ + +LN++ G + G + A++GASG+GK+TL+D LA R + G + +NG ++ + I Y Q DL TV E+L F+A R P ++S +K V+A+I L + A V+G G Sbjct: 898 TEVRRILNNVDGWVKPGTLTALMGASGAGKTTLLDCLAERTTMGVITGDVMVNGRPRDTSFSRSI-GYCQQQDLHLKTATVRESLRFSAYLRQPSSVSIEEKNEYVEAVIKILEMETYADAVVGVPG 1023
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: AB29G_ARATH (ABC transporter G family member 29 OS=Arabidopsis thaliana GN=ABCG29 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 41/122 (33.61%), Postives = 73/122 (59.84%), Query Frame = 3 Query: 396 LLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEG 761 LL +++G R G + A++G SG+GK+TL+D LA R ++G I+++G IS Y Q+D+ P +TV+E+L+++A RLP+ ++K +K V +++ + L + V+G G Sbjct: 841 LLKEVTGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKRQETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLPKEVTKYEKMRFVDEVMELVELESLKDAVVGLPG 962
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: ABCG5_MOUSE (ATP-binding cassette sub-family G member 5 OS=Mus musculus GN=Abcg5 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.806e-13 Identity = 44/122 (36.07%), Postives = 74/122 (60.66%), Query Frame = 3 Query: 390 KTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKE-SLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIG 752 + +L D+S G+IM +LG+SGSGK+TL+DA++ R+ + +L+G + +NG L + +YV+Q D+ LTV ETL + A L R+ + K +V+A++ +L L + A +IG Sbjct: 67 RQILKDVSLYIESGQIMCILGSSGSGKTTLLDAISGRLRRTGTLEGEVFVNGCELRRDQFQDCFSYVLQSDVFLSSLTVRETLRYTAMLALCRSSADFYNK-KVEAVMTELSLSHVADQMIG 187
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: ABCG4_HUMAN (ATP-binding cassette sub-family G member 4 OS=Homo sapiens GN=ABCG4 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.806e-13 Identity = 45/118 (38.14%), Postives = 69/118 (58.47%), Query Frame = 3 Query: 390 KTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKT 743 KTLL +SG+ E++ ++G SG+GKST ++ LA + +KG I +NG E R + +S Y+MQDD+L P LTV E +M +A +L + KK V ++ LGL + + T Sbjct: 82 KTLLKCLSGKFCRRELIGIMGPSGAGKSTFMNILAG-YRESGMKGQILVNGRPRELRTFRKMSCYIMQDDMLLPHLTVLEAMMVSANLKLSE--KQEVKKELVTEILTALGLMSCSHT 196
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: TUR2_SPIPO (Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrrhiza GN=TUR2 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.359e-13 Identity = 41/122 (33.61%), Postives = 71/122 (58.20%), Query Frame = 3 Query: 396 LLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEG 761 LL +SG R G + A++G SG GK+TL+D LA R ++G I+++G IS Y Q+D+ P +TV E+L+++A RLP + + ++K+ V ++D + L + +++G G Sbjct: 870 LLKGVSGAFRPGVLTALMGVSGRGKTTLMDVLAGRKTGGYIEGDIRISGYPKNQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLPAEVDEKQRKMFVDEVMDLVELNSLRGSLVGLPG 991
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: AB36G_ARATH (ABC transporter G family member 36 OS=Arabidopsis thaliana GN=ABCG36 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.359e-13 Identity = 40/122 (32.79%), Postives = 71/122 (58.20%), Query Frame = 3 Query: 396 LLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEG 761 LL ++G R G + A++G SG+GK+TL+D LA R ++G ++++G IS Y Q D+ P +TV E+L+F+A RLP+ + K +K + V +++ + L + +++G G Sbjct: 894 LLKGVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDVRISGFPKVQETFARISGYCEQTDIHSPQVTVRESLIFSAFLRLPKEVGKDEKMMFVDQVMELVELDSLRDSIVGLPG 1015
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: PDR5_YEAST (Pleiotropic ABC efflux transporter of multiple drugs OS=Saccharomyces cerevisiae GN=PDR5 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13 Identity = 44/127 (34.65%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 381 SKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDEG 761 ++T+ +LN++ G + G + A++GASG+GK+TL+D LA R+ + G I +NG + + I Y Q DL TV E+L F+A R P +S +K V+ +I L + A V+G G Sbjct: 882 AETRRILNNVDGWVKPGTLTALMGASGAGKTTLLDCLAERVTMGVITGDILVNGIPRDKSFPRSI-GYCQQQDLHLKTATVRESLRFSAYLRQPAEVSIEEKNRYVEEVIKILEMEKYADAVVGVAG 1007
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: ABCGA_DICDI (ABC transporter G family member 10 OS=Dictyostelium discoideum GN=abcG10 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13 Identity = 45/126 (35.71%), Postives = 73/126 (57.94%), Query Frame = 3 Query: 375 LFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIG 752 L K LLND+ G + G++ A++G+SG+GK+TL+D LA R ++ G LNG+ L + I+ YV Q D+ P LTV E L F+A+ R T+S K V+ +++ + +++ +IG Sbjct: 849 LNGKDLLLLNDVEGWIKPGQMTALMGSSGAGKTTLLDVLAKRKTMGTVTGKCLLNGKELNIDFER-ITGYVEQMDVHNPGLTVREALRFSAKLRQEPTVSLQDKYEYVEQVLEMMEMKHLGDALIG 973
BLAST of FC878624 vs. ExPASy Swiss-Prot
Match: ABCG9_DICDI (ABC transporter G family member 9 OS=Dictyostelium discoideum GN=abcG9 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13 Identity = 42/121 (34.71%), Postives = 75/121 (61.98%), Query Frame = 3 Query: 390 KTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIG 752 K LL+D+ G + G++ A++G+SG+GK+TL+D LA R +++G LNG+ LE + I+ YV Q D+ P LTV E L F+A+ R ++S +K V+ +++ + +++ ++G Sbjct: 838 KLLLDDVEGWIKPGQMTALMGSSGAGKTTLLDVLAKRKTLGTVQGKTFLNGKALEIDFER-ITGYVEQMDVHNPGLTVREALRFSAKLRQEPSVSLEEKYDYVEHVLEMMEMKHLGDALVG 957 The following BLAST results are available for this feature:
BLAST of FC878624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 113
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878624 ID=FC878624; Name=FC878624; organism=Citrus clementina; type=EST; length=819bpback to top |