FC917783

Overview
NameFC917783
Unique NameFC917783
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length818
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC917783 vs. ExPASy Swiss-Prot
Match: CAT1_PENJA (Catalase OS=Penicillium janthinellum PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.794e-37
Identity = 88/209 (42.11%), Postives = 115/209 (55.02%), Query Frame = 1
Query:  160 GPALLEDQIAREKIMRFDHERIPERVVHARGTGAFGTFKLFESAEDVTSAGVLTDTSRETPLFVRFSTVQGSKGSPDTVRDVRGFAIKMYTQEGNWDIVGNNIPVFFIQDAI--KFADVIHSVKPEPHNEVPQGQSAHNNFWDFQYLHSETTHMNQWIMSDRAIPRSYRMMQGFGVNTYSLVNKEGKRTFVKFHLTPELGVHSLVWDEA 780
            G  LL+D +  E I  FD ER+PER VHARGTGA GTF  +E   ++T+A  L+   + TP   RFSTV G++GS DT RDV GFA + Y  EGN+DIVGNNIPVFFI D I       +H+ KP P   +P+GQ   N   D      ++      I S+R  P++Y   +     ++ LV   GK+     H  P  G   L  +EA
Sbjct:   37 GATLLQDLLFTEIIFAFDRERVPERAVHARGTGAHGTFLSYEDWSNLTAASFLSAEGKFTPEMTRFSTVSGARGSADTARDVHGFATRFYVDEGNFDIVGNNIPVFFIWDVIIEPTLMALHAQKPNPRFHLPRGQQDPNRISDNLTARGDSLAQGSQISSERGSPKAYSNTEPNKHRSFRLVTDNGKQFQCSNHWQPLQGFIDLGVEEA 245          
BLAST of FC917783 vs. ExPASy Swiss-Prot
Match: CATA_PENJA (Catalase OS=Penicillium janthinellum PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.062e-17
Identity = 64/223 (28.70%), Postives = 104/223 (46.64%), Query Frame = 1
Query:  160 GPALLEDQIAREKIMRFDHERIPERVVHARGTGAFGTFKLFESAEDVTSAGVLTDTSRETPLFVRFSTVQGSKGSPDTVRDVRGFAIKMYTQEGNWDIVGNNIPVFFIQDAIKFADVIHSVKPEPHNEVPQGQSAH----NNFWDFQYLHSETTHMNQWIMSDRAIPRSYRMMQGFGVNTYSLVNKEGKRTFVKFHLTPELGVHSLVWDEALKINGQDPDFHR 816
            G  LL+D    +++ RFD     ER  HA    AFG F +       ++A       ++      FSTV G+KGS  TVRD   FA K  +     ++VGNN P+ F    + FA ++ + K +  N+     +A     + F     LH     ++ + ++  A   ++R M G+G +T+ LV K+G     KF    + G  + VW +A ++  +D D+ R
Sbjct:   34 GALLLQDISEWDEVFRFDRLEAVERAAHAAAAAAFGAF-VARGDWTASAAAAFQAAGKQIAFMAAFSTVAGAKGSA-TVRDADAFAAKFASAAALQELVGNNSPISFFIFDLLFAAILFASKAKAANQAAFAAAAELAAESLFVRLPSLHQ----VSFFALAGFAAVAAHRHMNGYGSHTFKLVAKDGSVYCSKFWYKADQGQAAEVWKDAEEVAAEDVDYFR 250          
The following BLAST results are available for this feature:
BLAST of FC917783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CAT1_PENJA1.794e-3742.11Catalase OS=Penicillium janthinellum PE=1 SV=1[more]
CATA_PENJA2.062e-1728.70Catalase OS=Penicillium janthinellum PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA99CE01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA99CE01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917783 ID=FC917783; Name=FC917783; organism=Citrus clementina; type=EST; length=818bp
CTAAAATCATTCATAATGTCTTCCACTACCAACGGCAAGGTGGCCGATTT
AGCCAAAGACACAGTCGATGTCCATGACAAACAACACATGACAACCGACT
ATGGAATCAAAATTAACAACCCAGACCATACGCTCCGCGTCGTCGACGAG
AAGCGCACTGGTCCCGCACTGCTCGAGGATCAAATTGCTCGCGAGAAGAT
TATGCGATTCGACCACGAACGCATTCCCGAGCGAGTAGTGCACGCCCGTG
GCACCGGCGCATTCGGTACTTTCAAGCTTTTCGAAAGTGCCGAAGACGTT
ACCAGCGCAGGCGTCTTGACAGACACCAGTCGGGAGACGCCTTTGTTCGT
GCGATTCTCAACAGTGCAGGGAAGCAAGGGTAGCCCCGACACTGTTCGGG
ATGTGCGCGGGTTCGCCATCAAGATGTATACGCAAGAAGGCAACTGGGAT
ATTGTGGGTAACAACATTCCCGTGTTCTTTATTCAGGATGCAATCAAGTT
CGCCGATGTCATCCACTCTGTGAAGCCCGAGCCGCATAATGAAGTGCCGC
AGGGCCAGAGCGCGCACAACAATTTCTGGGATTTCCAATATCTGCACTCG
GAGACGACGCATATGAATCAATGGATTATGTCGGATCGGGCTATTCCTCG
CTCATATCGCATGATGCAAGGATTTGGCGTGAACACTTATTCGCTGGTGA
ATAAGGAAGGCAAGCGCACATTTGTGAAGTTCCACCTCACTCCCGAATTG
GGTGTGCATTCGCTTGTCTGGGACGAGGCTCTCAAGATCAATGGCCAGGA
TCCCGATTTTCATCGCAA
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