FC917783

Overview
NameFC917783
Unique NameFC917783
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length818
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC917783 vs. ExPASy Swiss-Prot
Match: CATA2_ARATH (Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV=3)

HSP 1 Score: 209.534 bits (532), Expect = 1.785e-53
Identity = 108/241 (44.81%), Postives = 151/241 (62.66%), Query Frame = 1
Query:   73 HDKQHMTTDYGIKINNPDHTLRVVDEKRTGPALLEDQIAREKIMRFDHERIPERVVHARGTGAFGTFKLFESAEDVTSAGVLTDTSRETPLFVRFSTVQGSKGSPDTVRDVRGFAIKMYTQEGNWDIVGNNIPVFFIQDAIKFADVIHSVKPEPHNEVPQGQSAHNNFWDFQYLHSETTHMNQWIMSDRAIPRSYRMMQGFGVNTYSLVNKEGKRTFVKFHLTPELGVHSLVWDEALKING 795
            ++    TT+ G  + N + ++ V      GP LLED    EK+  FD ERIPERVVHARG  A G F++     ++T A  L     +TP+ VRFSTV   +GSP+T+RD RGFA+K YT+EGN+D+VGNN PVFFI+D +KF D++H++KP P + + +         DF   H E+ +M  ++  D  IP+ YR M G GVNTY L+NK GK  +VKFH  P  GV SL+ ++A+++ G
Sbjct:   12 YNSPFFTTNSGAPVWNNNSSMTVGPR---GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSHIQENW----RILDFFSHHPESLNMFTFLFDDIGIPQDYRHMDGSGVNTYMLINKAGKAHYVKFHWKPTCGVKSLLEEDAIRVGG 245          
BLAST of FC917783 vs. ExPASy Swiss-Prot
Match: CATA2_MAIZE (Catalase isozyme 2 OS=Zea mays GN=CAT2 PE=2 SV=3)

HSP 1 Score: 209.149 bits (531), Expect = 2.332e-53
Identity = 112/234 (47.86%), Postives = 145/234 (61.97%), Query Frame = 1
Query:   85 HMTTDYGIKINNPDHTLRVVDEKRTGPALLEDQIAREKIMRFDHERIPERVVHARGTGAFGTFKLFESAEDVTSAGVLTDTSRETPLFVRFSTVQGSKGSPDTVRDVRGFAIKMYTQEGNWDIVGNNIPVFFIQDAIKFADVIHSVKPEPHNEVPQGQSAHNNFWDFQYLHSETTHMNQWIMSDRAIPRSYRMMQGFGVNTYSLVNKEGKRTFVKFHLTPELGVHSLVWDEALK 786
            + TT+ G  + N D +L V      GP LLED    EK+  FD ERIPERVVHARG  A G F++      +T A  L     +TP+ VRFSTV   +GSP+T+RD RGFA+K YT+EGNWD+VGNN PVFFI+D IKF D++H++KP P   +           DF   H E+ HM  ++  D  IP  YR M G GV+TY+LV++ G  T+VKFH  P  GV SL+ DEA++
Sbjct:   16 YWTTNSGAPVWNNDSSLTV---GARGPILLEDYHC-EKLANFDRERIPERVVHARGASAKGFFEVTHDITHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLVGNNFPVFFIRDGIKFPDMVHALKPNPRTHIQDNW----RILDFFSHHPESLHMFSFLFDDVGIPADYRHMDGSGVHTYTLVSRAGTVTYVKFHWRPTCGVRSLMDDEAVR 241          
BLAST of FC917783 vs. ExPASy Swiss-Prot
Match: CATA_VIBF1 (Catalase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=katA PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.045e-53
Identity = 103/230 (44.78%), Postives = 146/230 (63.48%), Query Frame = 1
Query:  127 HTLRVVDEKRTGPALLEDQIAREKIMRFDHERIPERVVHARGTGAFGTFKLFESAEDVTSAGVLTDTSRETPLFVRFSTVQGSKGSPDTVRDVRGFAIKMYTQEGNWDIVGNNIPVFFIQDAIKFADVIHSVKPEPHNEVPQGQSAHNNFWDFQYLHSETTHMNQWIMSDRAIPRSYRMMQGFGVNTYSLVNKEGKRTFVKFHLTPELGVHSLVWDEALKINGQDPDFHR 816
            H   V    + GP LL+D    EK+  FD E IPER +HA+G+GA+GTF +       T A + ++  ++T LF RF+TV G +G+ D  RD+RGFA+K YT+EGNWD+VGNN PVFF++D +KF D+ H+VK +P   +   +SA NN WDF     E  H    +MSDR IP +YR M GFG +T+S +N + +R +VKFH   + G+ +L   EA ++ GQD + H+
Sbjct:   15 HNQNVQTAGKRGPQLLQDVWFLEKLAHFDREVIPERRMHAKGSGAYGTFTVTHDITKYTKAKLFSEIGKQTELFARFTTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFLRDPLKFPDLNHAVKRDPRTNM---RSAKNN-WDFWTSLPEALHQVTIVMSDRGIPATYRHMHGFGSHTFSFINSDNERFWVKFHFKSQQGIKNLSDAEAAQVIGQDRESHQ 240          
BLAST of FC917783 vs. ExPASy Swiss-Prot
Match: CATA1_NICPL (Catalase isozyme 1 (Fragment) OS=Nicotiana plumbaginifolia GN=CAT1 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.045e-53
Identity = 109/235 (46.38%), Postives = 148/235 (62.98%), Query Frame = 1
Query:   91 TTDYGIKINNPDHTLRVVDEKRTGPALLEDQIAREKIMRFDHERIPERVVHARGTGAFGTFKLFESAEDVTSAGVLTDTSRETPLFVRFSTVQGSKGSPDTVRDVRGFAIKMYTQEGNWDIVGNNIPVFFIQDAIKFADVIHSVKPEPHNEVPQGQSAHNNFWDFQYLHSETTHMNQWIMSDRAIPRSYRMMQGFGVNTYSLVNKEGKRTFVKFHLTPELGVHSLVWDEALKING 795
            TT+ G  + N + +L V      GP LLED    EK+  FD ER+PERVVHARG  A G F++      +T A  L     +TP+ VRFSTV   +GSP+T+RD RGFA+K YT+EGN+D+VGNN PVFFI+D +KF D++H++KP P + + +         DF     E+ HM  ++  D  IP+ YR M G GV+T++L+NK GK T+VKFH  P  GV SL+ DEA ++ G
Sbjct:   11 TTNSGAPVFNNNSSLTV---GARGPVLLEDYHLVEKLANFDRERVPERVVHARGASAKGFFEVTHDITHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSHIQENW----RVLDFFSHVPESLHMFTFLFDDIGIPQDYRHMDGSGVHTFTLINKAGKSTYVKFHWKPTCGVKSLLEDEAARVGG 238          
BLAST of FC917783 vs. ExPASy Swiss-Prot
Match: CATA_IPOBA (Catalase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.978e-53
Identity = 112/239 (46.86%), Postives = 146/239 (61.09%), Query Frame = 1
Query:   91 TTDYGIKINNPDHTLRVVDEKRTGPALLEDQIAREKIMRFDHERIPERVVHARGTGAFGTFKLFESAEDVTSAGVLTDTSRETPLFVRFSTVQGSKGSPDTVRDVRGFAIKMYTQEGNWDIVGNNIPVFFIQDAIKFADVIHSVKPEPHNEVPQGQSAHNNFWDFQYLH--SETTHMNQWIMSDRAIPRSYRMMQGFGVNTYSLVNKEGKRTFVKFHLTPELGVHSLVWDEALKINGQD 801
            TT+ G  + N    L V      GP LLED    EKI  F  ERIPERVVHARG  A G F++      +T A  L     +TPL VRFSTV   +GSP+T+RD RGFA+KMYT+ GNWD+VGNN PVFFI+D  +F DVIH+ KP P + + +      N+    YL    E+ +   W   D  IP  YR M+GFGV+T++++NKEGK  +VKFH  P  GV  L+ +EA++I G++
Sbjct:   18 TTNSGAPVWNNTCALTVGSR---GPILLEDYHLVEKIQNFTRERIPERVVHARGASAKGFFEVTHDITHLTCADFLRAPGVQTPLIVRFSTVIHERGSPETIRDPRGFAVKMYTRGGNWDLVGNNFPVFFIRDGTQFPDVIHAFKPNPKSHIQE------NWRILDYLSHLPESLNTFAWFYDDVGIPTDYRHMEGFGVHTFTMINKEGKANYVKFHWKPTCGVKCLLEEEAIRIGGEN 247          
BLAST of FC917783 vs. ExPASy Swiss-Prot
Match: CATA2_WHEAT (Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.195e-53
Identity = 109/237 (45.99%), Postives = 148/237 (62.45%), Query Frame = 1
Query:   85 HMTTDYGIKINNPDHTLRVVDEKRTGPALLEDQIAREKIMRFDHERIPERVVHARGTGAFGTFKLFESAEDVTSAGVLTDTSRETPLFVRFSTVQGSKGSPDTVRDVRGFAIKMYTQEGNWDIVGNNIPVFFIQDAIKFADVIHSVKPEPHNEVPQGQSAHNNFWDFQYLHSETTHMNQWIMSDRAIPRSYRMMQGFGVNTYSLVNKEGKRTFVKFHLTPELGVHSLVWDEALKING 795
            + TT+ G  + N ++ L V      GP LLED    EK+ +FD ERIPERVVHARG  A G F++      +T A  L     +TP+ VRFSTV   +GSP+T+RD RGFA+K YT+EGN+D+VGNN+PVFFI+D +KF D++H+ KP     + +         DF   H E+ HM  ++  D  IP +YR M GFGVNTY+L++++GK   VKFH  P  GV  L+ DEA+ + G
Sbjct:   16 YWTTNSGAPVWNNNNALTV---GHRGPILLEDYHLIEKLAQFDRERIPERVVHARGASAKGFFEVTHDVSQLTCADFLRAPGVQTPVIVRFSTVVHERGSPETLRDPRGFAVKFYTREGNFDLVGNNMPVFFIRDGMKFPDMVHAFKPSSKTNMQENW----RVVDFFSHHPESLHMFTFLFDDVGIPLNYRHMDGFGVNTYTLISRDGKAHLVKFHWKPTCGVKCLLDDEAVTVGG 245          
BLAST of FC917783 vs. ExPASy Swiss-Prot
Match: CATA_DESVM (Catalase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=katA PE=3 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 6.785e-53
Identity = 110/246 (44.72%), Postives = 154/246 (62.60%), Query Frame = 1
Query:   79 KQHMTTDYGIKINNPDHTLRVVDEKRTGPALLEDQIAREKIMRFDHERIPERVVHARGTGAFGTFKLFESAEDVTSAGVLTDTSRETPLFVRFSTVQGSKGSPDTVRDVRGFAIKMYTQEGNWDIVGNNIPVFFIQDAIKFADVIHSVKPEPHNEVPQGQSAHNNFWDFQYLHSETTHMNQWIMSDRAIPRSYRMMQGFGVNTYSLVNKEGKRTFVKFHLTPELGVHSLVWDEALKINGQDPDFHR 816
            K  +TT+ G  +  PD+   +    R GP LL+D    EK+  FD E IPER +HA+G+GA+GTF +       T A + +   ++T LFVRFSTV G +G+ D  RD+RGFAIK YT++GNWD+VGNN PVFF++D +KF D+ H+VK +P   +   +SA NN WDF     E  H    +MSDR IP SYR M GFG +T+S ++ + +R +VKFHL  + G+ +L   EA  I  +D + H+
Sbjct:    3 KHKLTTNAGAPV--PDNQNAMTAGPR-GPMLLQDVWFLEKLAHFDREVIPERRMHAKGSGAYGTFTVTHDITSYTKAALFSKIGKKTDLFVRFSTVAGERGAADAERDIRGFAIKFYTEQGNWDLVGNNTPVFFLRDPLKFPDLNHAVKRDPRTNM---RSAKNN-WDFWTSLPEALHQVTVVMSDRGIPASYRHMHGFGSHTFSFISPDNQRYWVKFHLRTQQGIKNLTDAEAEAIVARDRESHQ 241          
BLAST of FC917783 vs. ExPASy Swiss-Prot
Match: CATA2_SOLLC (Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 8.861e-53
Identity = 107/235 (45.53%), Postives = 149/235 (63.40%), Query Frame = 1
Query:   91 TTDYGIKINNPDHTLRVVDEKRTGPALLEDQIAREKIMRFDHERIPERVVHARGTGAFGTFKLFESAEDVTSAGVLTDTSRETPLFVRFSTVQGSKGSPDTVRDVRGFAIKMYTQEGNWDIVGNNIPVFFIQDAIKFADVIHSVKPEPHNEVPQGQSAHNNFWDFQYLHSETTHMNQWIMSDRAIPRSYRMMQGFGVNTYSLVNKEGKRTFVKFHLTPELGVHSLVWDEALKING 795
            TT+ G  + N + +L V      GP LLED    EK+  FD ERI ERVVHARG  A G F++      +T A  L     +TP+ VRFSTV   +GSP+T+RD RGFA+K YT+EGN+D+VGNN PVFFI+D +KF D++H++KP P + + +         DF   H E+ HM  ++  D  IP+ YR M G GV+T++L+N+ GK T+VKFH  P  GV SL+ ++A+++ G
Sbjct:   18 TTNSGAPVFNNNSSLTV---GARGPVLLEDYHLVEKLANFDRERIAERVVHARGASAKGFFEVTHDIAHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSHIQENW----RVLDFFSHHPESLHMFTFLFDDIGIPQDYRHMDGSGVHTFTLINRAGKSTYVKFHWKPTCGVKSLLEEKAIRVGG 245          
BLAST of FC917783 vs. ExPASy Swiss-Prot
Match: CATA_METBF (Catalase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=kat PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.511e-52
Identity = 104/240 (43.33%), Postives = 147/240 (61.25%), Query Frame = 1
Query:   88 MTTDYGIKINNPDHTLRVVDEKRTGPALLEDQIAREKIMRFDHERIPERVVHARGTGAFGTFKLFESAEDVTSAGVLTDTSRETPLFVRFSTVQGSKGSPDTVRDVRGFAIKMYTQEGNWDIVGNNIPVFFIQDAIKFADVIHSVKPEPHNEVPQGQSAHNNFWDFQYLHSETTHMNQWIMSDRAIPRSYRMMQGFGVNTYSLVNKEGKRTFVKFHLTPELGVHSLVWDEALKINGQDPD 807
            +TT +GI + +  ++L   +    GP L++D    +K+  FDHERIPERVVHA+G GA G F++       T A  L++  + T +FVRFSTV G KGS D+ RD RGFA+K YT++GN+D+VGNN PVFFI+D +KF D IH+ K  P           + FWDF  L  E+ H    + SDR  P +YR M G+  +TY   N++G+  +V++H   + G+ +L  +EA KI G DPD
Sbjct:   10 LTTGFGIPVGDDQNSLTAGNR---GPVLMQDVHLLDKLSHFDHERIPERVVHAKGAGAGGYFEVTADVTKYTKAKFLSEIGKRTEVFVRFSTVGGEKGSADSARDPRGFAVKFYTEDGNYDLVGNNTPVFFIRDPLKFPDFIHTQKRNPATNCKD----PDMFWDFLSLTPESIHQVTILFSDRGTPATYRNMNGYSSHTYKWYNEKGEYFWVQYHFKTDQGIKNLTLEEAEKIGGSDPD 242          
BLAST of FC917783 vs. ExPASy Swiss-Prot
Match: CATA1_CAEEL (Peroxisomal catalase 1 OS=Caenorhabditis elegans GN=ctl-2 PE=2 SV=3)

HSP 1 Score: 206.453 bits (524), Expect = 1.511e-52
Identity = 104/243 (42.80%), Postives = 143/243 (58.85%), Query Frame = 1
Query:   82 QHMTTDYGIKINNPDHTLRVVDEKRTGPALLEDQIAREKIMRFDHERIPERVVHARGTGAFGTFKLFESAEDVTSAGVLTDTSRETPLFVRFSTVQGSKGSPDTVRDVRGFAIKMYTQEGNWDIVGNNIPVFFIQDAIKFADVIHSVKPEPHNEVPQGQSAHNNFWDFQYLHSETTHMNQWIMSDRAIPRSYRMMQGFGVNTYSLVNKEGKRTFVKFHLTPELGVHSLVWDEALKINGQDPDF 810
            Q +TT  G  I +      V+   R GP L++D +  +++  FD ERIPERVVHA+G GA G F++         A +     ++TPL +RFSTV G  GS DT RD RGFAIK YT+EGNWD+VGNN P+FFI+D I F + IH+ K  P   +       N  +DF     E  H   ++ SDR +P  YR M G+G +T+ +VNK+GK  +VKFH  P  GV +L  ++A ++   DPD+
Sbjct:   21 QVITTSNGAPIYSKT---AVLTAGRRGPMLMQDVVYMDEMAHFDRERIPERVVHAKGAGAHGYFEVTHDISKYCKADIFNKVGKQTPLLIRFSTVGGESGSADTARDPRGFAIKFYTEEGNWDLVGNNTPIFFIRDPIHFPNFIHTQKRNPQTHLKD----PNMIFDFWLHRPEALHQVMFLFSDRGLPDGYRHMNGYGSHTFKMVNKDGKAIYVKFHFKPTQGVKNLTVEKAGQLASSDPDY 256          
The following BLAST results are available for this feature:
BLAST of FC917783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA2_ARATH1.785e-5344.81Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV... [more]
CATA2_MAIZE2.332e-5347.86Catalase isozyme 2 OS=Zea mays GN=CAT2 PE=2 SV=3[more]
CATA_VIBF13.045e-5344.78Catalase OS=Vibrio fischeri (strain ATCC 700601 / ... [more]
CATA1_NICPL3.045e-5346.38Catalase isozyme 1 (Fragment) OS=Nicotiana plumbag... [more]
CATA_IPOBA3.978e-5346.86Catalase OS=Ipomoea batatas PE=2 SV=1[more]
CATA2_WHEAT5.195e-5345.99Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1[more]
CATA_DESVM6.785e-5344.72Catalase OS=Desulfovibrio vulgaris (strain Miyazak... [more]
CATA2_SOLLC8.861e-5345.53Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2... [more]
CATA_METBF1.511e-5243.33Catalase OS=Methanosarcina barkeri (strain Fusaro ... [more]
CATA1_CAEEL1.511e-5242.80Peroxisomal catalase 1 OS=Caenorhabditis elegans G... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA99CE01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA99CE01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917783 ID=FC917783; Name=FC917783; organism=Citrus clementina; type=EST; length=818bp
CTAAAATCATTCATAATGTCTTCCACTACCAACGGCAAGGTGGCCGATTT
AGCCAAAGACACAGTCGATGTCCATGACAAACAACACATGACAACCGACT
ATGGAATCAAAATTAACAACCCAGACCATACGCTCCGCGTCGTCGACGAG
AAGCGCACTGGTCCCGCACTGCTCGAGGATCAAATTGCTCGCGAGAAGAT
TATGCGATTCGACCACGAACGCATTCCCGAGCGAGTAGTGCACGCCCGTG
GCACCGGCGCATTCGGTACTTTCAAGCTTTTCGAAAGTGCCGAAGACGTT
ACCAGCGCAGGCGTCTTGACAGACACCAGTCGGGAGACGCCTTTGTTCGT
GCGATTCTCAACAGTGCAGGGAAGCAAGGGTAGCCCCGACACTGTTCGGG
ATGTGCGCGGGTTCGCCATCAAGATGTATACGCAAGAAGGCAACTGGGAT
ATTGTGGGTAACAACATTCCCGTGTTCTTTATTCAGGATGCAATCAAGTT
CGCCGATGTCATCCACTCTGTGAAGCCCGAGCCGCATAATGAAGTGCCGC
AGGGCCAGAGCGCGCACAACAATTTCTGGGATTTCCAATATCTGCACTCG
GAGACGACGCATATGAATCAATGGATTATGTCGGATCGGGCTATTCCTCG
CTCATATCGCATGATGCAAGGATTTGGCGTGAACACTTATTCGCTGGTGA
ATAAGGAAGGCAAGCGCACATTTGTGAAGTTCCACCTCACTCCCGAATTG
GGTGTGCATTCGCTTGTCTGGGACGAGGCTCTCAAGATCAATGGCCAGGA
TCCCGATTTTCATCGCAA
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