FC917783

Overview
NameFC917783
Unique NameFC917783
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length818
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC917783 vs. ExPASy Swiss-Prot
Match: CATA_RANRU (Catalase OS=Rana rugosa GN=cat PE=2 SV=3)

HSP 1 Score: 199.519 bits (506), Expect = 1.848e-50
Identity = 96/219 (43.84%), Postives = 138/219 (63.01%), Query Frame = 1
Query:  160 GPALLEDQIAREKIMRFDHERIPERVVHARGTGAFGTFKLFESAEDVTSAGVLTDTSRETPLFVRFSTVQGSKGSPDTVRDVRGFAIKMYTQEGNWDIVGNNIPVFFIQDAIKFADVIHSVK--PEPHNEVPQGQSAHNNFWDFQYLHSETTHMNQWIMSDRAIPRSYRMMQGFGVNTYSLVNKEGKRTFVKFHLTPELGVHSLVWDEALKINGQDPDF 810
            GP L++D +  +++  FD ERIPERVVHA+G GAFG F++       + A V     + TP+ VRFSTV G  GS DTVRD RGFA+K YT++GNWD+ GNN P+FF++DA+ F   IHS K  P+ H + P      +  WDF  L  E+ H   ++ SDR IP  +R M G+G +T+ LVN + +  + KFH   + G+ +L  +EA +++ +DPD+
Sbjct:   48 GPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEFIGKRTPIAVRFSTVAGEAGSADTVRDPRGFAVKFYTEDGNWDLTGNNTPIFFVRDAMLFPSFIHSQKRNPQTHMKDP------DMVWDFWALRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNAKDEPIYCKFHFKTDQGIRNLTVEEANRLSAEDPDY 260          
BLAST of FC917783 vs. ExPASy Swiss-Prot
Match: CATA3_ARATH (Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV=3)

HSP 1 Score: 199.519 bits (506), Expect = 1.848e-50
Identity = 105/238 (44.12%), Postives = 146/238 (61.34%), Query Frame = 1
Query:   91 TTDYGIKINNPDHTLRVVDEKRTGPALLEDQIAREKIMRFDHERIPERVVHARGTGAFGTFKLFESAEDVTSAGVLTDTSRETPLFVRFSTVQGSKGSPDTVRDVRGFAIKMYTQEGNWDIVGNNIPVFFIQDAIKFADVIHSVKPEPHNEVPQGQSAHNNFW---DFQYLHSETTHMNQWIMSDRAIPRSYRMMQGFGVNTYSLVNKEGKRTFVKFHLTPELGVHSLVWDEALKING 795
            TT+ G  ++N   +L + +    GP LLED    EK+  F  ERIPERVVHARG  A G F++     ++T A  L     +TP+ VRFSTV   + SP+T+RD+RGFA+K YT+EGN+D+VGNN PVFFI+D I+F DV+H++KP P   + +       +W   D+     E+     W+  D  IP+ YR M+GFGV+TY+L+ K GK  FVKFH  P  G+ +L  +EA  + G
Sbjct:   18 TTNGGAPVSNNISSLTIGER---GPVLLEDYHLIEKVANFTRERIPERVVHARGISAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIRGFAVKFYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQE-------YWRILDYMSHLPESLLTWCWMFDDVGIPQDYRHMEGFGVHTYTLIAKSGKVLFVKFHWKPTCGIKNLTDEEAKVVGG 245          
BLAST of FC917783 vs. ExPASy Swiss-Prot
Match: CATA_PROMI (Catalase OS=Proteus mirabilis GN=katA PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.413e-50
Identity = 103/242 (42.56%), Postives = 151/242 (62.40%), Query Frame = 1
Query:   76 DKQHMTTDYGIKINNPDHTLRVVDEKRTGPALLEDQIAREKIMRFDHERIPERVVHARGTGAFGTFKLFESAEDVTSAGVLTDTSRETPLFVRFSTVQGSKGSPDTVRDVRGFAIKMYTQEGNWDIVGNNIPVFFIQDAIKFADVIHSVKPEPHNEVPQGQSAHNNFWDFQYLHSETTHMNQWIMSDRAIPRSYRMMQGFGVNTYSLVNKEGKRTFVKFHLTPELGVHSLVWDEALKINGQD 801
            +K+ +TT  G  + + ++   V+     GP LL+D    EK+  FD E IPER +HA+G+GAFGTF +       T A + ++  ++T +F RFSTV G +G+ D  RD+RGFA+K YT+EGNWD+VGNN PVF+++D +KF D+ H VK +P   +     A+   WDF     E+ H     MSDR +P SYR + GFG +TYS +NK+ +R +VKFH   + G+ +L+ DEA  + G+D
Sbjct:    2 EKKKLTTAAGAPVVDNNN---VITAGPRGPMLLQDVWFLEKLAHFDREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDMVGNNTPVFYLRDPLKFPDLNHIVKRDPRTNM--RNMAYK--WDFFSHLPESLHQLTIDMSDRGLPLSYRFVHGFGSHTYSFINKDNERFWVKFHFRCQQGIKNLMDDEAEALVGKD 236          
BLAST of FC917783 vs. ExPASy Swiss-Prot
Match: CATA_DICDI (Catalase-A OS=Dictyostelium discoideum GN=catA PE=2 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 4.116e-50
Identity = 111/243 (45.68%), Postives = 141/243 (58.02%), Query Frame = 1
Query:   88 MTTDYGIKINNPDHTLRVVDEKRTGPALLEDQIAREKIMRFDHERIPERVVHARGTGAFGTFKLFESAEDVTS---AGVLTDTSRETPLFVRFSTVQGSKGSPDTVRDVRGFAIKMYTQEGNWDIVGNNIPVFFIQDAIKFADVIHSVKPEPHNEVPQGQSAHNNFWDFQYLHSETTHMNQWIMSDRAIPRSYRMMQGFGVNTYSLVNKEGKRTFVKFHLTPELGVHSLVWDEALKINGQDPD 807
            +TT  G  I+N    L  +     GP L++D    +K+  FD ERIPERVVHA+G GA G F++  S  DV     A  L    + TP+F RFSTV G KGS D+ RD RGFA+K YT+EGN+D+VGNN PVFFI+D  KF D IH+ K  P           N FWDF     E+TH    + SDR  P+SYR M GF  +T   VN +GK  +VK H T E G+ +   +EA K++  DPD
Sbjct:    6 LTTSSGSPIDN---NLNSMTAGVNGPILIQDFTLIDKLAHFDRERIPERVVHAKGAGAHGYFEVPSS--DVPKWCKAKFLNKVGKRTPIFTRFSTVGGEKGSSDSERDPRGFAVKFYTEEGNFDMVGNNTPVFFIRDPSKFPDFIHTQKRNPQTNCKD----PNMFWDFLGQTPESTHQVSILFSDRGTPKSYRHMHGFSSHTLKFVNAQGKPYWVKLHFTSETGIQNYTAEEAAKMSMNDPD 239          
BLAST of FC917783 vs. ExPASy Swiss-Prot
Match: CATA_CAVPO (Catalase OS=Cavia porcellus GN=CAT PE=2 SV=4)

HSP 1 Score: 198.364 bits (503), Expect = 4.116e-50
Identity = 95/217 (43.78%), Postives = 134/217 (61.75%), Query Frame = 1
Query:  160 GPALLEDQIAREKIMRFDHERIPERVVHARGTGAFGTFKLFESAEDVTSAGVLTDTSRETPLFVRFSTVQGSKGSPDTVRDVRGFAIKMYTQEGNWDIVGNNIPVFFIQDAIKFADVIHSVKPEPHNEVPQGQSAHNNFWDFQYLHSETTHMNQWIMSDRAIPRSYRMMQGFGVNTYSLVNKEGKRTFVKFHLTPELGVHSLVWDEALKINGQDPDF 810
            GP L++D +  +++  FD ERIPERVVHA+G GAF  F++         A V     ++TP+ VRFSTV G  GS DTVRD RGFA+K YT+EG WD+VGNN P+FFI+DA+ F   IHS K  P   +       +  WDF  L  E+ H   ++ SDR IP  +R M G+G +T+ LVN  G+  + KFH   + G+ +L  ++A +++ +DPD+
Sbjct:   48 GPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFAYFEVTHDITKYCKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEEGIWDLVGNNTPIFFIRDALLFPSFIHSQKRNPQTHLKD----PDMMWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNGSGEAVYCKFHYKTDQGIKNLSVEDAARLSQEDPDY 260          
BLAST of FC917783 vs. ExPASy Swiss-Prot
Match: CATA1_TOBAC (Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 4.116e-50
Identity = 104/244 (42.62%), Postives = 144/244 (59.02%), Query Frame = 1
Query:   73 HDKQHMTTDYGIKINNPDHTLRVVDEKRTGPALLEDQIAREKIMRFDHERIPERVVHARGTGAFGTFKLFESAEDVTSAGVLTDTSRETPLFVRFSTVQGSKGSPDTVRDVRGFAIKMYTQEGNWDIVGNNIPVFFIQDAIKFADVIHSVKPEPHNEVPQGQSAHNNFW---DFQYLHSETTHMNQWIMSDRAIPRSYRMMQGFGVNTYSLVNKEGKRTFVKFHLTPELGVHSLVWDEALKING 795
            +D   +TT+ G  + N   +L V      GP LLED    EK+  FD ERIPERVVHARG  A G F++      +T A  L     +TP+  RFSTV   +GSP+++RD+RGFA+K YT+EGN+D+VGNN+PVFF +DA  F D I ++KP P + + +       +W   DF     E+ H   W   D  +P  YR M+G+GV+ Y L+NK GK  +VKFH  P  GV  +  +EA+++ G
Sbjct:   12 YDSPFLTTNAGGPVYNNVSSLTVGPR---GPVLLEDYHLIEKLATFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVICRFSTVVHERGSPESLRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQE-------YWKILDFFSFLPESLHTFAWFFDDVCLPTDYRHMEGYGVHAYQLINKAGKAHYVKFHWKPTCGVKCMSEEEAIRVGG 245          
BLAST of FC917783 vs. ExPASy Swiss-Prot
Match: CATA_STAEP (Catalase OS=Staphylococcus epidermidis GN=katA PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.376e-50
Identity = 97/218 (44.50%), Postives = 138/218 (63.30%), Query Frame = 1
Query:  154 RTGPALLEDQIAREKIMRFDHERIPERVVHARGTGAFGTFKLFESAEDVTSAGVLTDTSRETPLFVRFSTVQGSKGSPDTVRDVRGFAIKMYTQEGNWDIVGNNIPVFFIQDAIKFADVIHSVKPEPHNEVPQGQSAHNNFWDFQYLHSETTHMNQWIMSDRAIPRSYRMMQGFGVNTYSLVNKEGKRTFVKFHLTPELGVHSLVWDEALKINGQDPD 807
            R GP L++D    E+I  FD E IPER +HA+G+GAFGTF +       T+A + ++  ++T +F RFSTV G +G+ D  RD+RGFA+K YT++GNWD+VGNN PVFF +D   F  +  +VK +P   +   +SA NN WDF     E  H    +MSDR +P+ +R M GFG +TYS+ N +G+R +VK+H   + G+ +   +EA KI G D D
Sbjct:   27 RRGPLLMQDVYYLEQISHFDREVIPERRMHAKGSGAFGTFTVTNDITQYTNAKIFSEVGKQTEMFARFSTVSGERGAADLERDIRGFALKFYTEDGNWDLVGNNTPVFFFRDPKLFISLNRAVKRDPRTNM---RSAQNN-WDFWTGLPEALHQVTILMSDRGMPKGFRNMHGFGSHTYSMYNDKGERVWVKYHFRTQQGIENYTDEEAAKIVGMDRD 240          
BLAST of FC917783 vs. ExPASy Swiss-Prot
Match: CATA_SOLME (Catalase OS=Solanum melongena PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.376e-50
Identity = 104/241 (43.15%), Postives = 144/241 (59.75%), Query Frame = 1
Query:   73 HDKQHMTTDYGIKINNPDHTLRVVDEKRTGPALLEDQIAREKIMRFDHERIPERVVHARGTGAFGTFKLFESAEDVTSAGVLTDTSRETPLFVRFSTVQGSKGSPDTVRDVRGFAIKMYTQEGNWDIVGNNIPVFFIQDAIKFADVIHSVKPEPHNEVPQGQSAHNNFWDFQYLHSETTHMNQWIMSDRAIPRSYRMMQGFGVNTYSLVNKEGKRTFVKFHLTPELGVHSLVWDEALKING 795
            +D   +TT+ G  + N   +L V      GP LLED    EK+  FD ERIPERVVHARG  A G F++      +T A  L     +TP+  RFSTV   +GSP+++RD+RGFA+K YT+EGN+D+VGNN+PVFF +DA  F D I ++KP P + + +         DF     E+ H   +   D  +P +YR M+GFGV+ Y L+NK GK  +VKFH  P  GV S+  +EA+++ G
Sbjct:   12 YDTPFLTTNAGGPVYNNVSSLTVGPR---GPVLLEDYHLIEKLATFDRERIPERVVHARGASAKGFFEVTHDVSHLTCADFLRAPGVQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQENW----RILDFFSFLPESLHTFAFFYDDVCLPINYRHMEGFGVHAYQLINKAGKAHYVKFHWKPTCGVKSMTEEEAIRVGG 245          
BLAST of FC917783 vs. ExPASy Swiss-Prot
Match: CATA_HAEIN (Catalase OS=Haemophilus influenzae GN=katA PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.376e-50
Identity = 101/219 (46.12%), Postives = 138/219 (63.01%), Query Frame = 1
Query:  160 GPALLEDQIAREKIMRFDHERIPERVVHARGTGAFGTFKLFESAEDVTSAGVLTDTSRETPLFVRFSTVQGSKGSPDTVRDVRGFAIKMYTQEGNWDIVGNNIPVFFIQDAIKFADVIHSVKPEPHNEVPQGQSAHNNFWDFQYLHSETTHMNQWIMSDRAIPRSYRMMQGFGVNTYSLVNKEGKRTFVKFHLTPELGVHSLVWDEALKINGQDPDFHR 816
            GP L +D    EK+  F  E IPER +HA+G+GAFGTF +       T A + ++  ++T +F RF+TV G +G+ D  RD+RGFA+K YT+EGNWD+VGNN PVFF++D  KF D+  +VK +P   +   +SA NN WDF  L  E  H    +MSDR IP SYR M GFG +TYS  N+ G+R +VKFH   + G+ +L   EA +I   D + H+
Sbjct:   36 GPLLAQDLWLNEKLADFVREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFTTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNM---RSATNN-WDFWTLLPEALHQVTVVMSDRGIPASYRHMHGFGSHTYSFWNEAGERFWVKFHFRTQQGIKNLTDAEAAEIIANDRESHQ 250          
BLAST of FC917783 vs. ExPASy Swiss-Prot
Match: CATA1_SOLLC (Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.376e-50
Identity = 103/241 (42.74%), Postives = 143/241 (59.34%), Query Frame = 1
Query:   73 HDKQHMTTDYGIKINNPDHTLRVVDEKRTGPALLEDQIAREKIMRFDHERIPERVVHARGTGAFGTFKLFESAEDVTSAGVLTDTSRETPLFVRFSTVQGSKGSPDTVRDVRGFAIKMYTQEGNWDIVGNNIPVFFIQDAIKFADVIHSVKPEPHNEVPQGQSAHNNFWDFQYLHSETTHMNQWIMSDRAIPRSYRMMQGFGVNTYSLVNKEGKRTFVKFHLTPELGVHSLVWDEALKING 795
            +D   +TT+ G  + N   +L V      GP LLED    EK+  FD E+IPERVVHARG  A G F++      +T A  L     +TP+  RFSTV   +GSP+++RD+RGFA+K YT+EGN+D+VGNN+PVFF +DA  F D I ++KP P + + +         DF     E+ H   +   D  +P  YR M+GFGV+ Y L+NKEGK  +VKFH  P  GV  +  +EA+++ G
Sbjct:   12 YDTPFLTTNAGGPVYNNVSSLTVGPR---GPVLLEDYYLIEKLATFDREKIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGAQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQENW----RILDFFSFLPESLHTFAFFYDDVCLPTDYRHMEGFGVHAYQLINKEGKAHYVKFHWKPTCGVKCMSEEEAIRVGG 245          
The following BLAST results are available for this feature:
BLAST of FC917783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA_RANRU1.848e-5043.84Catalase OS=Rana rugosa GN=cat PE=2 SV=3[more]
CATA3_ARATH1.848e-5044.12Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV... [more]
CATA_PROMI2.413e-5042.56Catalase OS=Proteus mirabilis GN=katA PE=1 SV=1[more]
CATA_DICDI4.116e-5045.68Catalase-A OS=Dictyostelium discoideum GN=catA PE=... [more]
CATA_CAVPO4.116e-5043.78Catalase OS=Cavia porcellus GN=CAT PE=2 SV=4[more]
CATA1_TOBAC4.116e-5042.62Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 P... [more]
CATA_STAEP5.376e-5044.50Catalase OS=Staphylococcus epidermidis GN=katA PE=... [more]
CATA_SOLME5.376e-5043.15Catalase OS=Solanum melongena PE=2 SV=1[more]
CATA_HAEIN5.376e-5046.12Catalase OS=Haemophilus influenzae GN=katA PE=2 SV... [more]
CATA1_SOLLC5.376e-5042.74Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA99CE01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA99CE01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917783 ID=FC917783; Name=FC917783; organism=Citrus clementina; type=EST; length=818bp
CTAAAATCATTCATAATGTCTTCCACTACCAACGGCAAGGTGGCCGATTT
AGCCAAAGACACAGTCGATGTCCATGACAAACAACACATGACAACCGACT
ATGGAATCAAAATTAACAACCCAGACCATACGCTCCGCGTCGTCGACGAG
AAGCGCACTGGTCCCGCACTGCTCGAGGATCAAATTGCTCGCGAGAAGAT
TATGCGATTCGACCACGAACGCATTCCCGAGCGAGTAGTGCACGCCCGTG
GCACCGGCGCATTCGGTACTTTCAAGCTTTTCGAAAGTGCCGAAGACGTT
ACCAGCGCAGGCGTCTTGACAGACACCAGTCGGGAGACGCCTTTGTTCGT
GCGATTCTCAACAGTGCAGGGAAGCAAGGGTAGCCCCGACACTGTTCGGG
ATGTGCGCGGGTTCGCCATCAAGATGTATACGCAAGAAGGCAACTGGGAT
ATTGTGGGTAACAACATTCCCGTGTTCTTTATTCAGGATGCAATCAAGTT
CGCCGATGTCATCCACTCTGTGAAGCCCGAGCCGCATAATGAAGTGCCGC
AGGGCCAGAGCGCGCACAACAATTTCTGGGATTTCCAATATCTGCACTCG
GAGACGACGCATATGAATCAATGGATTATGTCGGATCGGGCTATTCCTCG
CTCATATCGCATGATGCAAGGATTTGGCGTGAACACTTATTCGCTGGTGA
ATAAGGAAGGCAAGCGCACATTTGTGAAGTTCCACCTCACTCCCGAATTG
GGTGTGCATTCGCTTGTCTGGGACGAGGCTCTCAAGATCAATGGCCAGGA
TCCCGATTTTCATCGCAA
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