FC917784
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC917784 vs. ExPASy Swiss-Prot
Match: RBP56_HUMAN (TATA-binding protein-associated factor 2N OS=Homo sapiens GN=TAF15 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.627e-11 Identity = 64/201 (31.84%), Postives = 80/201 (39.80%), Query Frame = -2 Query: 171 GLWGLDDYSGKSWGGEDNGLWGLNDYSGKSGGGEDNGLWGLDDYSGKSGGGENNGFWGFDYYAGKSWGGEDNGLWGLNDYSGKSGGGEDNGLWGLDDYSGKSGGGENNGFWGLNDDAGESGGGEDNGFWGLNDDAGESWGGEDNGFWGLNDNTGESGGGENDAFWGLNDHSGEGRCWQNNGFRGFD--NYSGKSRGGKDDF 767 G G Y G+ G D G +G + G GG +G D SG GG+ +G G+ G +GG+ G Y G GGG G Y G GGG G D G GG D G G D G G G +G + G GG+ +G D SG G G G D Y GK GG++D+ Sbjct: 398 GYGGERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSG-GGYGGDRGGGYGGDRGG-----GYGGDRGGGYGGDRGG---YGGDRGGGYGGDRGGYGGDRGGYGG--DRG--GYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYG-GDRSGGGYGGDRGGGYGGDRGGYGGK-MGGRNDY 583
BLAST of FC917784 vs. ExPASy Swiss-Prot
Match: Y0266_DICDI (Uncharacterized protein DDB_G0290685 OS=Dictyostelium discoideum GN=DDB_G0290685 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.480e-11 Identity = 69/197 (35.03%), Postives = 92/197 (46.70%), Query Frame = -2 Query: 174 GGEDNGLWGLNDYSGKSG--GGEDNGLWGLDDYSGKSGGGENNGFWGFDYYAGKSWGGEDNGLWGLNDYSGKSG--GGEDNGLWGLDDYSGKSGGGENNGFWGLND-DAGESG--GGEDNGFWGLNDDAGES-WGGEDNGFWGLNDNTGESG-GGENDAFWGLNDHSGEGRCWQNNGFRGFDNYSG---KSRGGKDD 728 GGE+N G N+ G++ GGE+N DD K GGENN GGE+N G N+ G++ GGE+N D GENN G N+ D GE+ G E+N G N+ GE+ GE+N G N+ GE+ GEN+ G N+ G +NN G DN G GG+D+ Sbjct: 579 GGENNQDGGENNQDGENNQDGGENNQ----DDGENKQDGGENN-----------QDGGENNQDDGENNQDGENNQDGGENNQ----DGDENNQDSGENNQDSGENNQDGGENNQDGDENNQDGGENNQDGENNQNGENNQDGGENNQDGENNQDGENNQDGGENNQDG----GENNQDGGEDNQDGGENNQEGGEDN 752
BLAST of FC917784 vs. ExPASy Swiss-Prot
Match: GRP1_PHAVU (Glycine-rich cell wall structural protein 1.0 OS=Phaseolus vulgaris PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.642e-11 Identity = 61/175 (34.86%), Postives = 70/175 (40.00%), Query Frame = -2 Query: 246 SGKSWGGEDNGLWGLNDYSGKSGGGEDNGLWG----LDDYSGKSGGGENNGFWGFDYYAGKSWGGEDNGLWGLNDYSGKSGGGEDNGLWGLDDYSGKSG-GGENNGFWGLNDDAGESGGGEDNGFWGLNDDAGESWGGEDNGFWGLND----NTGESGGGENDAFWGLNDHSGEG 743 +G +G G G G GGG D G +G G GGG N G +G G S GG G G SG GGGE +G G Y G +G GG NG G G GGG G G AG +GG G G G GGG + +G SGEG Sbjct: 77 AGAGYGAAGGGHGGGGGNGGGGGGGADGGGYGGGAGKGGGEGYGGGGANGGGYGG---GGGSGGGGGGGAGGAG--SGY-GGGEGSGAGG--GYGGANGGGGGGNGGGGGGGSGGAHGGGAAGGGEGAGQGAGGGYGGGAAGGGGRGSGGGGGGGYGGGGARGSGYGGGGGSGEG 243
BLAST of FC917784 vs. ExPASy Swiss-Prot
Match: K1C9_HUMAN (Keratin, type I cytoskeletal 9 OS=Homo sapiens GN=KRT9 PE=1 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 9.981e-11 Identity = 51/151 (33.77%), Postives = 61/151 (40.40%), Query Frame = -2 Query: 291 SGKSWGGEDNGLWGLNDYSGKSGGGEDNGLWGLDDYSGKSGGGENNGFWGFDYYAGKSWGGEDNGLWGLNDYSGKSGGGEDNGLWGLDDYSGKSGGGENNGFWGLNDDAGESGGGEDNGFWGLNDDAGESWGGEDNGFWGLNDNTGESGGG 743 SG S+G G G + G SGGG G G GGG +G Y G S GG +SG SGGG G G +Y G SG G +G G GG G G + G +GGE G +G + SGGG Sbjct: 481 SGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGG----------HSGGSGGGHSGGSGG--NYGGGSGSGGGSG-------GGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGGGEEASGSGGG 612 The following BLAST results are available for this feature:
BLAST of FC917784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC917784 ID=FC917784; Name=FC917784; organism=Citrus clementina; type=EST; length=777bpback to top |