FC917855

Overview
NameFC917855
Unique NameFC917855
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length912
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNAJ1_DROME (DnaJ protein homolog 1 OS=Drosophila melanogaster GN=DnaJ-1 PE=1 SV=3)

HSP 1 Score: 189.504 bits (480), Expect = 2.280e-47
Identity = 113/267 (42.32%), Postives = 157/267 (58.80%), Query Frame = 1
Query:  115 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKG-QMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXXXDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEAL 912
            MG D+YKIL ++R A ++++KKAYRKLA+K+HPDKN + +  AE +FK+I+EAY+VLSD +KR ++D YGE+GLKG Q                       F                      GG   + +     + GDD+FA FN     +  +   ++  PIE  L  SLE++ KG  KKMKISR    ++G P   E++L I +KPGWK GTKITFP++G+   N  P+D++FII +KPHSLFKR+G DL  T +ISL +AL
Sbjct:    1 MGKDFYKILGLERKASDDEIKKAYRKLALKYHPDKNKSPQ--AEERFKEIAEAYEVLSDKKKRDIFDNYGEDGLKGGQPGPDGGGQPGAYTYQFHGDPRATFAQFFGSSDPFGAFFTGGDNMFSGGQGGNTNEIFWNIGGDDMFA-FN----AQAPSRKRQQDPPIEHDLFVSLEEVDKGCIKKMKISRMATGSNG-PYKEEKVLRITVKPGWKAGTKITFPQEGDSAPNKTPADIVFIIRDKPHSLFKREGIDLKYTAQISLKQAL 259          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DJB13_MOUSE (DnaJ homolog subfamily B member 13 OS=Mus musculus GN=Dnajb13 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.529e-43
Identity = 111/267 (41.57%), Postives = 161/267 (60.30%), Query Frame = 1
Query:  115 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXXXDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEE-ILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEAL 912
            MG+DYY +LQV RN+++  +KKAYRKLA+K HP K+  ++  A   FKQI+EAYDVLSDP KR +YD++GEEGLKG +                  T + F+  NP+ +              GG    +  F     G+DI  +F  G  G G     ++  PIER L  SLEDL+ G TKK+KISR V++     +T ++ ILTI+++PGW++GT+ITF ++G++  N+IP+D+IFI+ EK H  F+R+ ++L     I L +AL
Sbjct:    1 MGLDYYAVLQVTRNSEDAQIKKAYRKLALKNHPLKS--SEPGAPEIFKQIAEAYDVLSDPVKRGIYDKFGEEGLKGGIPLEFGSQTPWT-------TGYVFHG-NPDKVFHEF---------FGGDNPFSEFFDAE--GNDIDLNFG-GLWGRG---VQKQDPPIERDLYLSLEDLFFGCTKKIKISRRVLNEDRYSSTIKDKILTIDVRPGWRQGTRITFEKEGDQGPNIIPADIIFIVKEKLHPRFRREHDNLFFVYPIPLGKAL 242          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DJB13_HUMAN (DnaJ homolog subfamily B member 13 OS=Homo sapiens GN=DNAJB13 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.208e-42
Identity = 106/268 (39.55%), Postives = 161/268 (60.07%), Query Frame = 1
Query:  115 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXXXDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAP-IERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEE-ILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEAL 912
            MG DYY +L + RN+++  +K+AYR+LA+K HP K+  N+  +   F+QI+EAYDVLSDP KR +YD++GEEGLKG +                  T + F+ + PE +              GG+   +  F     G ++  +F  G  G G    ++K  P +ER L  SLEDL+ G TKK+KISR V++  G  +T ++ ILTI++KPGW++GT+ITF ++G++  N+IP+D+IFI+ EK H  F+R+ ++L     I L +AL
Sbjct:    1 MGQDYYSVLGITRNSEDAQIKQAYRRLALKHHPLKS--NEPSSAEIFRQIAEAYDVLSDPMKRGIYDKFGEEGLKGGIPLEFGSQTPWT-------TGYVFHGK-PEKVFHEF---------FGGNNPFSEFFDAE--GSEVDLNFG-GLQGRG----VKKQDPQVERDLYLSLEDLFFGCTKKIKISRRVLNEDGYSSTIKDKILTIDVKPGWRQGTRITFEKEGDQGPNIIPADIIFIVKEKLHPRFRRENDNLFFVNPIPLGKAL 242          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: PSI1_SCHPO (Protein psi1 OS=Schizosaccharomyces pombe GN=psi1 PE=2 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 7.104e-41
Identity = 117/305 (38.36%), Postives = 149/305 (48.85%), Query Frame = 1
Query:  130 YKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYG-EEGLK-----GQMXXXXXXXXXXXXXXXXXXTSFRFN-----------TRNPEDIXXXXXXXXXXXXD-MGGSRASASGFPRGMFGDDIFASFNRGSA----------GEGSANALRKAAP----------------IERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEAL 912
            Y  L+V   A E +LKKAYRKLA+K+HPDKNPN +K    KFK+IS AY+VLSDPQ+R +YDQYG  EG       G                     +F FN             +P DI              MGG      G    M  D  F +  RG            G G+    R++ P                I R L  SLEDL+ G TKKMKISR +IDASG+    + IL I++KPGWK GTKI F  +G+E  +    D+ F++ EKPH +F R G+DL +  ++SL EAL
Sbjct:    8 YDCLEVRPEASEAELKKAYRKLALKYHPDKNPNGEK----KFKEISLAYEVLSDPQRRKLYDQYGITEGNAAPPPPGAEGGPGAGFGGFPGAGPGGARTFHFNMGGPGGAQFFSASDPNDIFERVFGHAFAGGGGMGGGMGGMGGMDDDMDMDGGFGTRTRGGGMPGGFANMFGGGGAGPHARRSHPSFGGSRPSQPPAQNEVITRPLNVSLEDLFTGCTKKMKISRHIIDASGQSVKADRILEIKVKPGWKAGTKIKFAGEGDEKPDGTVQDIQFVLAEKPHPVFTRSGDDLRMQVELSLKEAL 308          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNJA1_DICDI (DnaJ homolog subfamily A member 1 homolog OS=Dictyostelium discoideum GN=dnaja1 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.146e-29
Identity = 102/335 (30.45%), Postives = 144/335 (42.99%), Query Frame = 1
Query:  124 DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDA-EAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXXXDMGGSRASASGFPRGMFGDDIFASFNRGSAG--------EGSANALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVI------DASGRPNTTEEILTI----------EIKPGW-------------------------------------------KKGT----KITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEAL 912
            +YY+ L V  +  E++LKKAYRK+A+K+HPDKN    KDA EAKFK ISEAY+VLSDP+KR +YD YG EG+K                         F+  + ED+               G+     GF  G  G D F  F+ G+ G         G     RK   IE  +  SLE+LY G   K+ ISRD +        S +P  T    T           ++ PG                                            +KGT    +I    +G+E   V P D+I  I EKP+  FKR+G++L+ T+++ L++++
Sbjct:    6 EYYERLGVKPDCTEDELKKAYRKMAVKYHPDKNQGPGKDAAEAKFKDISEAYEVLSDPEKRKMYDSYGSEGMK----------------------ESGFHASSAEDLFSHFF----------GAGGGGGGFSFGGGGGDDFGGFSFGNMGGMGGMGGMGGGHKKRRKGEDIEHEMNRSLEELYNGKLVKISISRDEVCKTCKGSGSNKPGVTTTCPTCNGSRYVFQKKQVGPGMIQQVQTACHTCHGTGEKIKEEDKCKECKGKRVIQGKKIVQFQVEKGTRDGERIMLQGQGSEYPGVPPGDVIITIREKPNVNFKRNGDNLIYTKRLKLLDSI 308          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNJB6_BOVIN (DnaJ homolog subfamily B member 6 OS=Bos taurus GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.958e-27
Identity = 58/107 (54.21%), Postives = 73/107 (68.22%), Query Frame = 1
Query:  121 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDI 441
            VDYY++L V R+A  ED+KKAYRKLA+KWHPDKNP NK++AE KFKQ++EAY+VLSD +KR +YD+YG+EGL G                      F F  RNPED+
Sbjct:    2 VDYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDRYGKEGLNG---------GGGGGSHFDSPFEFGFTFRNPEDV 99          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTE (Chaperone protein dnaJ OS=Chlorobium tepidum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.958e-27
Identity = 100/317 (31.55%), Postives = 141/317 (44.48%), Query Frame = 1
Query:  124 DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXXXDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERT-----LPCSLEDLYKGTTKKMKIS-----RDVIDASGRPNTTE--------------------EILTIEIKP-------------------GWKKG---TKITFP---EKGNEL----------RNVIPSDLIFIIDEKPHSLFKRDGNDLV 879
            DYY+IL V R+A ++++KKAYRKLA+K+HPDKNP+N K+AE KFK+++EAY+VLS+  KR  YDQ+G  G+                      ++F                        GG RA   G P   F D     F+ G +G GS    R++A I+ T     L  +LE++ KG  K +KI      R+      +   TE                    + + I + P                   G K+G    KIT P   + GN L          R   P DLI +I+EKPH LFKR+G+D++
Sbjct:    4 DYYEILGVARSADKDEIKKAYRKLALKYHPDKNPDN-KEAEEKFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGSGPGGAGYGDINDIFSAFN------------------DMFSGGGGRARTGGSPFSGFED----VFSGGFSGSGSGR--RRSAGIQGTDLKIRLKLTLEEIAKGVEKTIKIKKLVTCRECNGTGSKSGKTEICPTCHGSGEVRQATKTMFGQFMNISVCPTCGGEGRVVKDRCPSCYGEGIKQGEATVKITVPAGVQDGNYLTLQGQGNAGPRGGAPGDLIVVIEEKPHELFKRNGDDII 295          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNJB6_PONAB (DnaJ homolog subfamily B member 6 OS=Pongo abelii GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.218e-26
Identity = 57/107 (53.27%), Postives = 73/107 (68.22%), Query Frame = 1
Query:  121 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDI 441
            VDYY++L V R+A  ED+KKAYRKLA+KWHPDKNP NK++AE KFKQ++EAY+VLSD +KR +YD+YG+EGL G                      F F  RNP+D+
Sbjct:    2 VDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNG---------GGGGGSHFDSPFEFGFTFRNPDDV 99          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNJB6_MACFA (DnaJ homolog subfamily B member 6 OS=Macaca fascicularis GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.218e-26
Identity = 57/107 (53.27%), Postives = 73/107 (68.22%), Query Frame = 1
Query:  121 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDI 441
            VDYY++L V R+A  ED+KKAYRKLA+KWHPDKNP NK++AE KFKQ++EAY+VLSD +KR +YD+YG+EGL G                      F F  RNP+D+
Sbjct:    2 VDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNG---------GGGGGSHFDSPFEFGFTFRNPDDV 99          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNJB6_HUMAN (DnaJ homolog subfamily B member 6 OS=Homo sapiens GN=DNAJB6 PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 2.218e-26
Identity = 57/107 (53.27%), Postives = 73/107 (68.22%), Query Frame = 1
Query:  121 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDI 441
            VDYY++L V R+A  ED+KKAYRKLA+KWHPDKNP NK++AE KFKQ++EAY+VLSD +KR +YD+YG+EGL G                      F F  RNP+D+
Sbjct:    2 VDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNG---------GGGGGSHFDSPFEFGFTFRNPDDV 99          
The following BLAST results are available for this feature:
BLAST of FC917855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ1_DROME2.280e-4742.32DnaJ protein homolog 1 OS=Drosophila melanogaster ... [more]
DJB13_MOUSE1.529e-4341.57DnaJ homolog subfamily B member 13 OS=Mus musculus... [more]
DJB13_HUMAN2.208e-4239.55DnaJ homolog subfamily B member 13 OS=Homo sapiens... [more]
PSI1_SCHPO7.104e-4138.36Protein psi1 OS=Schizosaccharomyces pombe GN=psi1 ... [more]
DNJA1_DICDI8.146e-2930.45DnaJ homolog subfamily A member 1 homolog OS=Dicty... [more]
DNJB6_BOVIN9.958e-2754.21DnaJ homolog subfamily B member 6 OS=Bos taurus GN... [more]
DNAJ_CHLTE9.958e-2731.55Chaperone protein dnaJ OS=Chlorobium tepidum GN=dn... [more]
DNJB6_PONAB2.218e-2653.27DnaJ homolog subfamily B member 6 OS=Pongo abelii ... [more]
DNJB6_MACFA2.218e-2653.27DnaJ homolog subfamily B member 6 OS=Macaca fascic... [more]
DNJB6_HUMAN2.218e-2653.27DnaJ homolog subfamily B member 6 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA49BD07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA49BD07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917855 ID=FC917855; Name=FC917855; organism=Citrus clementina; type=EST; length=912bp
CAAAAACTCTTAGCTGAAGCGAATTGGATCGAATCTAATCGAAGAGAAGC
GAGAGTACAAAAGAGAGACGCAATCACGACGAGGAAGCGAAAGAGCCAAA
ACGACGTCGGACAGATGGGTGTAGATTATTACAAAATTCTCCAAGTAGAC
CGAAACGCCAAGGAGGAAGATTTGAAGAAAGCGTATCGGAAGCTCGCAAT
GAAGTGGCATCCCGATAAGAACCCTAACAACAAGAAAGATGCCGAGGCCA
AATTTAAACAAATCTCCGAAGCTTACGACGTTCTGAGTGATCCGCAAAAG
AGAGCGGTATATGATCAGTACGGAGAAGAAGGTTTGAAAGGCCAGATGCC
GCCACCTGGCGCGAGCGGGTTTCCGGGCGCTGGTGCCGGCGCTGGAGGTC
CGACGTCGTTTCGGTTCAATACGAGAAATCCTGAGGATATATTCTCGGAG
TTCTTCGGATTTTCGAGCCCGTTTGGAGACATGGGCGGTTCGCGCGCCAG
TGCGTCGGGATTTCCTAGAGGTATGTTTGGTGATGATATATTTGCGTCGT
TTAATAGAGGGTCGGCCGGAGAAGGGTCGGCGAATGCGCTGAGAAAAGCA
GCGCCTATTGAACGAACATTACCGTGTAGTTTGGAAGACTTGTATAAGGG
AACCACTAAGAAGATGAAGATTTCAAGAGATGTTATCGATGCTAGTGGAC
GACCCAACACTACGGAAGAAATTCTTACAATTGAAATCAAGCCAGGGTGG
AAGAAAGGTACGAAAATCACGTTCCCAGAGAAAGGAAATGAACTGCGGAA
TGTTATACCCTCAGACCTTATCTTCATCATTGATGAGAAACCTCATAGCC
TCTTCAAGAGGGATGGTAATGATCTTGTTGTCACCCAAAAGATATCTCTC
GTGGAAGCTCTG
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