FC917855

Overview
NameFC917855
Unique NameFC917855
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length912
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNJA1_HUMAN (DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.758e-23
Identity = 99/324 (30.56%), Postives = 134/324 (41.36%), Query Frame = 1
Query:  127 YYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXXXDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVI--DASGR----------PN---TTEEILTIEIKPGW-------------------------------------------KKGTK----ITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEAL 912
            YY +L V  NA +E+LKKAYRKLA+K+HPDKNPN  +    KFKQIS+AY+VLSD +KR +YD+ GE+ +K                                                GG   +  GF   M   DIF  F     G G     R+   +   L  +LEDLY G T+K+ + ++VI     GR          PN   T  +I   +I PG                                             KG K    ITF  +G++   + P D+I ++D+K H++F R G DL +   I LVEAL
Sbjct:    7 YYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGE----KFKQISQAYEVLSDAKKRELYDKGGEQAIK-----------------------------------------------EGG---AGGGFGSPM---DIFDMF---FGGGGRMQRERRGKNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVCMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEAL 270          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNJA1_BOVIN (DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.758e-23
Identity = 99/324 (30.56%), Postives = 134/324 (41.36%), Query Frame = 1
Query:  127 YYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXXXDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVI--DASGR----------PN---TTEEILTIEIKPGW-------------------------------------------KKGTK----ITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEAL 912
            YY +L V  NA +E+LKKAYRKLA+K+HPDKNPN  +    KFKQIS+AY+VLSD +KR +YD+ GE+ +K                                                GG   +  GF   M   DIF  F     G G     R+   +   L  +LEDLY G T+K+ + ++VI     GR          PN   T  +I   +I PG                                             KG K    ITF  +G++   + P D+I ++D+K H++F R G DL +   I LVEAL
Sbjct:    7 YYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGE----KFKQISQAYEVLSDAKKRELYDKGGEQAIK-----------------------------------------------EGG---AGGGFGSPM---DIFDMF---FGGGGRMQRERRGKNVVHQLTVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVCMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEAL 270          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEST (Chaperone protein dnaJ OS=Pseudomonas stutzeri GN=dnaJ PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.758e-23
Identity = 88/322 (27.33%), Postives = 131/322 (40.68%), Query Frame = 1
Query:  124 DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXXXDMGGSRASASGFPRGMFGD---DIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKKMKISRDV----IDASGRPNTT----------------------------------------------------EEILTIEIKPGWKKGTKITFPEKGNELRNVIPS-DLIFIIDEKPHSLFKRDGNDLVVTQKISLVEA 909
            D+Y++L V+R A E +LKKAYR+LAMK HPD+NP +K  AE  FK+ +EAY+VLSDP KRA YDQYG  G+  QM                                              G+ A  +G+    F D   D+F+ F  G  G GS    ++ + +  TL   LE+  +GTT  +++   V     D SG    T                                                    ++ L++++ PG   G +I    +G       P+ DL  +++ + H++F+RDG  L     IS  +A
Sbjct:    5 DFYEVLGVERGASEAELKKAYRRLAMKHHPDRNPGDKA-AEEAFKEANEAYEVLSDPSKRAAYDQYGHAGVDPQM----------------------------------------------GAGAGGAGYGGANFSDIFGDVFSDFFSGGRG-GSRGGAQRGSDLRYTLELDLEEAVRGTTVTIRVPTLVECKTCDGSGAKKGTSPVTCTTCGGIGQVRMQQGFFSVQQTCPRCHGSGKMISDPCGSCHGQGRVEEQKTLSVKVPPGVDTGDRIRLSGEGEAGTQGGPAGDLYVVVNVREHAIFQRDGKHLYCEVPISFADA 278          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNAJ_PELCD (Chaperone protein dnaJ OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.758e-23
Identity = 92/298 (30.87%), Postives = 131/298 (43.96%), Query Frame = 1
Query:  124 DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXXXDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLED---LYKGTTKKM-----------------KISRDVIDASGRPNTTEE---------------ILTIEIKPGWKKGTKITFPEKGNE-LRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEA 909
            DYY++L V RNA E ++KKAYRKLA+K+HPDKN  +K  AE KFK+ISEAY +LSD Q+R +YDQYG  GL G                    +S  F     ED+            D+ G R S     RG  GDD+   +N     E +A  L     I R   C   D      GTT ++                  ++R   + +G     ++                L+++I  G + G+++    +G   L    P DL  +I  + H LF+RDG  ++    IS  +A
Sbjct:    5 DYYEVLGVHRNASETEIKKAYRKLAIKYHPDKNAGDKA-AEDKFKEISEAYSILSDTQQRVIYDQYGHAGLNG------------GGGGGGSYSSGGFGGTPFEDL------FGDIFGDIFGGRGSQRS--RGRRGDDL--RYNLSINFEEAAFGLETKIQIPRHQTCGTCDGIGAKPGTTPRVCPTCQGAGQVRVQQGYFSLTRPCPECNGEGQIIDQPCEECHGSGRVRGKRTLSLKIPAGVETGSRLKLSSEGEPGLNGGPPGDLYVVISVQDHPLFQRDGQHVICEIPISFPQA 279          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNAJ1_CERAE (DnaJ homolog subfamily A member 1 OS=Cercopithecus aethiops GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.758e-23
Identity = 99/324 (30.56%), Postives = 134/324 (41.36%), Query Frame = 1
Query:  127 YYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXXXDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVI--DASGR----------PN---TTEEILTIEIKPGW-------------------------------------------KKGTK----ITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEAL 912
            YY +L V  NA +E+LKKAYRKLA+K+HPDKNPN  +    KFKQIS+AY+VLSD +KR +YD+ GE+ +K                                                GG   +  GF   M   DIF  F     G G     R+   +   L  +LEDLY G T+K+ + ++VI     GR          PN   T  +I   +I PG                                             KG K    ITF  +G++   + P D+I ++D+K H++F R G DL +   I LVEAL
Sbjct:    7 YYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGE----KFKQISQAYEVLSDAKKRELYDKGGEQAIK-----------------------------------------------EGG---AGGGFGSPM---DIFDMF---FGGGGRMQRERRGKNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVCMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEAL 270          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNJA1_PONAB (DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.296e-23
Identity = 99/324 (30.56%), Postives = 134/324 (41.36%), Query Frame = 1
Query:  127 YYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXXXDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVI--DASGR----------PN---TTEEILTIEIKPGW-------------------------------------------KKGTK----ITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEAL 912
            YY +L V  NA +E+LKKAYRKLA+K+HPDKNPN  +    KFKQIS+AY+VLSD +KR +YD+ GE+ +K                                                GG   +  GF   M   DIF  F     G G     R+   +   L  +LEDLY G T+K+ + ++VI     GR          PN   T  +I   +I PG                                             KG K    ITF  +G++   + P D+I ++D+K H++F R G DL +   I LVEAL
Sbjct:    7 YYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGE----KFKQISQAYEVLSDAKKRELYDKGGEQAIK-----------------------------------------------EGG---AGGGFGSPM---DIFDMF----FGGGRMQRERRGKNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVCMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEAL 269          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNJB7_HUMAN (DnaJ homolog subfamily B member 7 OS=Homo sapiens GN=DNAJB7 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.998e-23
Identity = 46/74 (62.16%), Postives = 62/74 (83.78%), Query Frame = 1
Query:  121 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKG 342
            VDYY++L + R A  ED+KKAY K+A+KWHPDKNP NK++AE KFK+++EAY+VLS+ +KR +YD+YG EGL G
Sbjct:    2 VDYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKEEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNG 75          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNJB2_HUMAN (DnaJ homolog subfamily B member 2 OS=Homo sapiens GN=DNAJB2 PE=2 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 2.998e-23
Identity = 82/262 (31.30%), Postives = 116/262 (44.27%), Query Frame = 1
Query:  127 YYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXXXDMGGSRASASGFPRGMFGDDI--FASF-NRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNV----IPSDLIFIID----EKPHSLFKRDGNDLV 879
            YY+IL V R+A  +D+KKAYR+ A++WHPDKNP+NK+ AE KFK+++EAY+VLSD  KR +YD+YG EGL G                      F F  R+PE++                     SG P     DD+  F+   NRGS   G       + P       S      G      +S       GR  TT  I+        + G +    E+  +L++V    +P DL   ++    E+  S+  R G   V
Sbjct:    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG------TGTGPSRAEAGSGGPGFTFTFRSPEEVFREFF---------------GSGDPFAELFDDLGPFSELQNRGSRHSGPFFTFSSSFPGHSDFSSSSFSFSPGAGAFRSVSTSTTFVQGRRITTRRIM--------ENGQERVEVEEDGQLKSVTINGVPDDLALGLELSRREQQPSVTSRSGGTQV 236          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOD6 (Chaperone protein dnaJ OS=Clostridium difficile (strain 630) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.998e-23
Identity = 90/300 (30.00%), Postives = 129/300 (43.00%), Query Frame = 1
Query:  124 DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXXXDMGGSRASASGFPRGM-FGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKK-----------MKISRDVID--ASGRP----NTTEEI-------------------LTIEIKPGWKKGTKITFPEKGNELRNVIP-SDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEA 909
            DYY++L + + A+ +++KKAYRKLAMK+HPD+NP + K+AE KFK+I+EAY+VLSD  KR  YDQ+G +GL GQ                             ED+              GG RA   G  RG      +  SF   + G+  +  + ++   E    C+      GT+KK             + R      AS RP    N T E+                   + ++I  G   G  I    +G       P  DL  +++ K H LF RDGND+     I+ V+A
Sbjct:    6 DYYEVLGISKGAEAQEIKKAYRKLAMKYHPDRNPGD-KEAEEKFKEINEAYEVLSDDTKRKTYDQFGHDGLNGQGGFGGQGGFGGQGFGGF------------EDM-FGDIFGDMFGGSFGGGRARRRGPQRGADIRQSVTISFEEAAFGKKMSIKVNRSEECEE---CNGTGAKPGTSKKTCSTCNGTGQVRTVQRTPFGNIASSRPCSACNGTGEVIESPCSKCHGTGNTRKVKTIEVDIPAGIDDGQMIKLSGQGEVGEKGAPRGDLYIVVNVKSHPLFTRDGNDIYFEMPITFVQA 288          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNAJ_ALCBS (Chaperone protein dnaJ OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.998e-23
Identity = 91/322 (28.26%), Postives = 132/322 (40.99%), Query Frame = 1
Query:  124 DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXXXDMGGSRASASGFPRGMFGD---DIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKKMKI----SRDVIDASGRPNTTEEI----------------------------------------------------LTIEIKPGWKKGTKITFPEKGNELRNVIPS-DLIFIIDEKPHSLFKRDGNDLVVTQKISLVEA 909
            DYY++L   ++A  +DLKKAYR+LAMK+HPD+NP++ K+A AKFK+  EAY+VL+D QKRA YDQ+G  G+ GQ                                              GG   + +G   G FGD   DIF     G+ G G      + A +  TL  SLE   +G  +K++I    S DV   SG    ++ +                                                    L+++I  G   G +I    +G    +  PS DL   +  + H +F+RDG++L     IS V+A
Sbjct:    5 DYYEVLGAAKDASAQDLKKAYRRLAMKYHPDRNPDD-KEALAKFKEAKEAYEVLADEQKRAAYDQFGHAGVNGQ----------------------------------------------GGGPGAGAG--AGGFGDIFGDIFGDIFGGAGGGGGRRGPSRGADLRYTLELSLEQAVRGCDEKIRIPTWDSCDVCHGSGAKEGSQPVTCTTCGGVGQVRMQQGFFTVQQACPTCKGEGKIIKDPCGNCGGQGRVQNTKTLSVKIPAGVDTGDRIRLAGEGEAGVHGAPSGDLYVQVAVREHDIFQRDGDNLYCEVPISFVDA 277          
The following BLAST results are available for this feature:
BLAST of FC917855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJA1_HUMAN1.758e-2330.56DnaJ homolog subfamily A member 1 OS=Homo sapiens ... [more]
DNJA1_BOVIN1.758e-2330.56DnaJ homolog subfamily A member 1 OS=Bos taurus GN... [more]
DNAJ_PSEST1.758e-2327.33Chaperone protein dnaJ OS=Pseudomonas stutzeri GN=... [more]
DNAJ_PELCD1.758e-2330.87Chaperone protein dnaJ OS=Pelobacter carbinolicus ... [more]
DNAJ1_CERAE1.758e-2330.56DnaJ homolog subfamily A member 1 OS=Cercopithecus... [more]
DNJA1_PONAB2.296e-2330.56DnaJ homolog subfamily A member 1 OS=Pongo abelii ... [more]
DNJB7_HUMAN2.998e-2362.16DnaJ homolog subfamily B member 7 OS=Homo sapiens ... [more]
DNJB2_HUMAN2.998e-2331.30DnaJ homolog subfamily B member 2 OS=Homo sapiens ... [more]
DNAJ_CLOD62.998e-2330.00Chaperone protein dnaJ OS=Clostridium difficile (s... [more]
DNAJ_ALCBS2.998e-2328.26Chaperone protein dnaJ OS=Alcanivorax borkumensis ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA49BD07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA49BD07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917855 ID=FC917855; Name=FC917855; organism=Citrus clementina; type=EST; length=912bp
CAAAAACTCTTAGCTGAAGCGAATTGGATCGAATCTAATCGAAGAGAAGC
GAGAGTACAAAAGAGAGACGCAATCACGACGAGGAAGCGAAAGAGCCAAA
ACGACGTCGGACAGATGGGTGTAGATTATTACAAAATTCTCCAAGTAGAC
CGAAACGCCAAGGAGGAAGATTTGAAGAAAGCGTATCGGAAGCTCGCAAT
GAAGTGGCATCCCGATAAGAACCCTAACAACAAGAAAGATGCCGAGGCCA
AATTTAAACAAATCTCCGAAGCTTACGACGTTCTGAGTGATCCGCAAAAG
AGAGCGGTATATGATCAGTACGGAGAAGAAGGTTTGAAAGGCCAGATGCC
GCCACCTGGCGCGAGCGGGTTTCCGGGCGCTGGTGCCGGCGCTGGAGGTC
CGACGTCGTTTCGGTTCAATACGAGAAATCCTGAGGATATATTCTCGGAG
TTCTTCGGATTTTCGAGCCCGTTTGGAGACATGGGCGGTTCGCGCGCCAG
TGCGTCGGGATTTCCTAGAGGTATGTTTGGTGATGATATATTTGCGTCGT
TTAATAGAGGGTCGGCCGGAGAAGGGTCGGCGAATGCGCTGAGAAAAGCA
GCGCCTATTGAACGAACATTACCGTGTAGTTTGGAAGACTTGTATAAGGG
AACCACTAAGAAGATGAAGATTTCAAGAGATGTTATCGATGCTAGTGGAC
GACCCAACACTACGGAAGAAATTCTTACAATTGAAATCAAGCCAGGGTGG
AAGAAAGGTACGAAAATCACGTTCCCAGAGAAAGGAAATGAACTGCGGAA
TGTTATACCCTCAGACCTTATCTTCATCATTGATGAGAAACCTCATAGCC
TCTTCAAGAGGGATGGTAATGATCTTGTTGTCACCCAAAAGATATCTCTC
GTGGAAGCTCTG
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