FC917855

Overview
NameFC917855
Unique NameFC917855
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length912
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: MAS5_SCHPO (Mitochondrial protein import protein mas5 OS=Schizosaccharomyces pombe GN=SPBC1734.11 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.538e-22
Identity = 71/194 (36.60%), Postives = 94/194 (48.45%), Query Frame = 1
Query:  130 YKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXXXDMGGSRASASGFPRGMFGDDIFAS-FNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVI--DASGR 702
            Y++L VD  A + +LKKAYRKLA+K+HPDKNPN    A  KFK+IS AY++L+D +KRA YD++GEEGL+G                                               GG+    S        DD+FAS F  G  G G     RK   +  T+  +LEDLY+G T K+ + + VI    SGR
Sbjct:    8 YEVLNVDVTASQAELKKAYRKLALKYHPDKNPN----AGDKFKEISRAYEILADEEKRATYDRFGEEGLQG-----------------------------------------------GGADGGMS-------ADDLFASFFGGGMFGGGMPRGPRKGKDLVHTIKVTLEDLYRGKTTKLALQKKVICPKCSGR 143          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNJB3_MACFU (DnaJ homolog subfamily B member 3 OS=Macaca fuscata fuscata GN=DNAJB3 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.330e-22
Identity = 46/73 (63.01%), Postives = 61/73 (83.56%), Query Frame = 1
Query:  124 DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKG 342
            +YY++L V      ED+KKAYRKLA+KWHPDKNP+NK++AE +FKQ++EAY+VLSD +KR VYD+YGE G +G
Sbjct:    3 NYYEVLGVQVQRFPEDIKKAYRKLALKWHPDKNPDNKEEAERRFKQVAEAYEVLSDAKKRDVYDRYGEAGAEG 75          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNAJ_RHILW (Chaperone protein dnaJ OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.330e-22
Identity = 91/323 (28.17%), Postives = 128/323 (39.63%), Query Frame = 1
Query:  124 DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXXXDMGGSRASASGFPRGMFGD---DIFAS-FNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKKMK----ISRDVIDASG-RPNT---------------------------------------------------TEEILTIEIKPGWKKGTKITFPEKGNE-LRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEA 909
            D+Y+ L V + A E++LK A+RKLAMK+HPDKNP++ KDAE KFK+I+EAY++L DPQKRA YD+YG    +                                               MGG      GF  G F D   DIF      G A + S+    + A +   +  +LE+ + G T +++    I+ DV   SG +P T                                                    E  L++ I  G + GT+I    +G    R     DL   +  KPH  ++RDG DL     IS+  A
Sbjct:    5 DFYETLGVAKTADEKELKSAFRKLAMKFHPDKNPDD-KDAERKFKEINEAYEMLKDPQKRAAYDRYGHAAFE--------------------------------------------HGGMGG--GGGGGFAGGGFSDIFEDIFGEMMGGGRARQRSSGGRERGADLRYNMEITLEEAFSGKTAQIRVPTSITCDVCSGSGAKPGTQPKNCGTCQGSGRVRAAQGFFSIERTCPTCHGRGQIIPDPCPKCHGQGRVTEERSLSVNIPAGIEDGTRIRLQGEGEAGARGGPAGDLYIFLSVKPHEFYQRDGADLYCAVPISMTTA 280          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNAJ_PROA2 (Chaperone protein dnaJ OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.655e-22
Identity = 93/321 (28.97%), Postives = 131/321 (40.81%), Query Frame = 1
Query:  124 DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXXXDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVI--------------------------------------------DASGRPNTTEEILTIEIKPGWKKG---TKITFP---EKGNEL----------RNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVE 906
            DYY++L V R+A ++++KKAYRKLAMK+HPDKNP+N  +AE KFK+ +EAY+VLS+  KR  YDQ+G  G+ G                        FN                   DM G  A   G P G   +D+F+    G  G  S +A    + ++  L  SLE++ KG  K +KI + V                                                G     +E  T     G K+G    K+  P   E GN L          R  +  DLI +I+E  H +F R G+D+V    +S  +
Sbjct:    4 DYYEVLGVGRSATKDEIKKAYRKLAMKYHPDKNPDN-SEAEEKFKEANEAYEVLSNDDKRRRYDQFGHAGV-GSSASSQGGPFGGGGTGDLGDIFSAFN-------------------DMFGGGARGGGSPFGF--EDVFS----GGGGRRSRSAGVSGSDLKIRLKLSLEEIAKGVEKTLKIKKQVACDVCNGTGSKTGELETCPTCQGTGEVRQASKTMFGQFVNIAACPTCGGEGRVVKERCTACHGEGIKQGETTVKVNIPAGVEDGNYLTLRGQGNAGPRGGMNGDLIVVIEEVEHKIFARRGDDVVYNLTLSYAD 297          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNAJ_LARHH (Chaperone protein dnaJ OS=Laribacter hongkongensis (strain HLHK9) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.655e-22
Identity = 68/189 (35.98%), Postives = 93/189 (49.21%), Query Frame = 1
Query:  124 DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXXXDMGGSRASASGFPRGMFGD---DIFASFNRGSA---GEGSANALRKAAPIERTLPCSLEDLYKGTTKKMKI 672
            D+Y +L V+R+A ++D+KKAYRKLAMK+HPD+NP++ KDAE KFK+  EAY++LSD QKRA YDQYG  G+  Q                                               G      GF  G FGD   DIF     G A   G G  NA+ + + +   L  +LE+  +G  K+++I
Sbjct:    5 DFYDVLGVNRDASDDDIKKAYRKLAMKYHPDRNPDS-KDAEEKFKEAKEAYEILSDAQKRAAYDQYGHAGVDPQAGF--------------------------------------------GGAGGQQGF--GGFGDAFADIFGDIFGGGARAGGGGGRNAVYRGSDLRYNLEITLEEAARGCEKQIRI 146          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNAJ_AGRRK (Chaperone protein dnaJ OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.655e-22
Identity = 93/324 (28.70%), Postives = 125/324 (38.58%), Query Frame = 1
Query:  124 DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXXXDMGGSRASASGF-PRGMFGD---DIFASFNRGSAGEG-SANALRKAAPIERTLPCSLEDLYKGTTKKMK----ISRDVIDASG-RPNT---------------------------------------------------TEEILTIEIKPGWKKGTKITFPEKGNELRNVIPS-DLIFIIDEKPHSLFKRDGNDLVVTQKISLVEA 909
            DYY+ L V R A E++LK A+RKLAM++HPDKNP++  DAE KFK+I+EAY+ L DP KRA YD+YG    +                                               MGG      GF   G F D   DIF     G  G   S+    + A +   +  SLE+ + G T +++    I+ DV   SG +P T                                                    E  L++ I  G + GT+I    +G       PS DL   +  KPH  F+RDG DL     IS+  A
Sbjct:    5 DYYETLGVSRTADEKELKSAFRKLAMQFHPDKNPDD-NDAERKFKEINEAYETLKDPNKRAAYDRYGHAAFE--------------------------------------------HGGMGGGGFGGGGFGGGGGFSDIFEDIFGEMMGGGRGRARSSGGRERGADLRYNMEISLEEAFTGKTAQIRVPTSITCDVCSGSGAKPGTQPKTCGTCQGSGRVRAAQGFFSVERTCPTCHGRGQTIPDPCGKCHGQGRITEERSLSVNIPSGIEDGTRIRLQGEGEAGTRGGPSGDLYIFLSVKPHEFFQRDGADLYCAVPISMTTA 283          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: MAS5_YEAST (Mitochondrial protein import protein MAS5 OS=Saccharomyces cerevisiae GN=YDJ1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.385e-22
Identity = 66/189 (34.92%), Postives = 95/189 (50.26%), Query Frame = 1
Query:  127 YYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXXXDMGGSRASASGFPRG--MFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVI 687
            +Y IL V   A + ++KKAYRK A+K+HPDKNP+  ++A  KFK+ S AY++LSDP+KR +YDQ+GE+GL G                                               GG    A GFP G   FGDDIF+ F  G+ G       ++   I+  +  SLE+LYKG T K+ +++ ++
Sbjct:    7 FYDILGVPVTATDVEIKKAYRKCALKYHPDKNPS--EEAAEKFKEASAAYEILSDPEKRDIYDQFGEDGLSG----------------------------------------------AGG----AGGFPGGGFGFGDDIFSQF-FGAGGAQRPRGPQRGKDIKHEISASLEELYKGRTAKLALNKQIL 142          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEPW (Chaperone protein dnaJ OS=Pseudomonas putida (strain W619) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.385e-22
Identity = 91/319 (28.53%), Postives = 128/319 (40.13%), Query Frame = 1
Query:  124 DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXXXDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKKMKISRDV----IDASG-----RPNT---------------------------------------------TEEILTIEIK--PGWKKGTKITFPEKGNELRNVIPS-DLIFIIDEKPHSLFKRDGNDLVVTQKISLVEA 909
            DYY++L V+R A E DLKKAYR+LAMK+HPD+NP + K++E KFK+ +EAY+VLSD  KRA +DQYG  G+                                                MGG  A   G        D+F+ F  G  G G   A R  + +  TL  +LE+  +GTT  +++   V     D SG      P+T                                              EE  T+ +K   G   G +I    +G    +  P+ DL  +I+ + H +F+RDG  L     IS  +A
Sbjct:    5 DYYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGD-KESEDKFKEANEAYEVLSDASKRAAFDQYGHAGV---------------------------------------------DPSMGGGGAGFGGANFSDIFGDVFSDFFGGGRGGGRGGAAR-GSDLRYTLELNLEEAVRGTTVSIRVPTLVNCQPCDGSGAKKGSTPSTCPTCGGIGQVRMQQGFFSVQQTCPRCHGQGKIITDPCGSCHGEGRVEEYKTLSVKVPAGVDTGDRIRLSGEGEAGTHGGPTGDLYVVINVREHEIFQRDGKHLYCEVPISYTDA 276          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEE4 (Chaperone protein dnaJ OS=Pseudomonas entomophila (strain L48) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.385e-22
Identity = 88/319 (27.59%), Postives = 128/319 (40.13%), Query Frame = 1
Query:  124 DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXXXDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKKMKISRDV----IDASG-----RPNT---------------------------------------------TEEILTIEIK--PGWKKGTKITFPEKGNELRNVIPS-DLIFIIDEKPHSLFKRDGNDLVVTQKISLVEA 909
            D+Y++L V+R A E DLKKAYR+LAMK+HPD+NP + K++E KFK+ +EAY+VLSD  KRA YDQYG  G+                                                MGG  A   G        D+F+ F  G  G   +   ++ + +  TL  +LE+  +GTT  +++   V     D SG      P+T                                              EE  T+ +K   G   G +I    +G    +  P+ DL  +I+ + H +F+RDG  L     IS  +A
Sbjct:    5 DFYEVLGVERGASEGDLKKAYRRLAMKYHPDRNPGD-KESEDKFKEANEAYEVLSDTSKRAAYDQYGHAGV---------------------------------------------DPSMGGGGAGFGGANFSDIFGDVFSDFFGGGRGGSRSGGAQRGSDLRYTLELNLEEAVRGTTVSIRVPTLVNCKPCDGSGAKKGSTPSTCPTCGGIGQVRMQQGFFAVQQTCPRCHGQGKIITDPCNSCHGEGRVEEYKTLSVKVPAGVDTGDRIRLSGEGEAGTHGGPTGDLYVVINVREHDIFQRDGKHLYCEVPISYTDA 277          
BLAST of FC917855 vs. ExPASy Swiss-Prot
Match: DNAJ_CHRSD (Chaperone protein dnaJ OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.385e-22
Identity = 87/322 (27.02%), Postives = 131/322 (40.68%), Query Frame = 1
Query:  124 DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXXXDMGGSRASASGFPRGMFGD---DIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKKMKISRDV----IDASG-RPNTTEE---------------------------------------------------ILTIEIKPGWKKGTKITFPEKGNE-LRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEA 909
            DYY++L ++R A ++++KKAYR+LA K+HPD+NP++   AE KF+++SEAY+VL+D +KR+ YDQ+G  G+ GQ                                              GG    A GF   +FGD   DIF     G  G  + NA ++ + +   L   LED   GTT  +++ R +     D  G  P +T+E                                                    L+++I  G   G +I    +G   L    P DL      KPH +F+RDG  L     I+ ++A
Sbjct:    5 DYYEVLGIERGADQKEIKKAYRRLAQKYHPDRNPDDDTAAE-KFREVSEAYEVLTDEEKRSAYDQFGHAGVDGQAGGGFGG---------------------------------------GGFGGGAGGF-SDIFGDVFGDIF-----GGGGRRNPNAPQRGSDLRYNLELDLEDAVAGTTVDIRVPRHIECEHCDGDGAEPGSTKETCPTCHGQGQVRMQQGFFAVQQTCPTCHGAGQTIKVPCRKCHGEGRVRETRTLSVKIPAGVDTGDRIRLNNEGEAGLNGGPPGDLYVQAAIKPHPIFERDGRHLQCEVPINFIDA 280          
The following BLAST results are available for this feature:
BLAST of FC917855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MAS5_SCHPO2.538e-2236.60Mitochondrial protein import protein mas5 OS=Schiz... [more]
DNJB3_MACFU4.330e-2263.01DnaJ homolog subfamily B member 3 OS=Macaca fuscat... [more]
DNAJ_RHILW4.330e-2228.17Chaperone protein dnaJ OS=Rhizobium leguminosarum ... [more]
DNAJ_PROA25.655e-2228.97Chaperone protein dnaJ OS=Prosthecochloris aestuar... [more]
DNAJ_LARHH5.655e-2235.98Chaperone protein dnaJ OS=Laribacter hongkongensis... [more]
DNAJ_AGRRK5.655e-2228.70Chaperone protein dnaJ OS=Agrobacterium radiobacte... [more]
MAS5_YEAST7.385e-2234.92Mitochondrial protein import protein MAS5 OS=Sacch... [more]
DNAJ_PSEPW7.385e-2228.53Chaperone protein dnaJ OS=Pseudomonas putida (stra... [more]
DNAJ_PSEE47.385e-2227.59Chaperone protein dnaJ OS=Pseudomonas entomophila ... [more]
DNAJ_CHRSD7.385e-2227.02Chaperone protein dnaJ OS=Chromohalobacter salexig... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA49BD07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA49BD07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917855 ID=FC917855; Name=FC917855; organism=Citrus clementina; type=EST; length=912bp
CAAAAACTCTTAGCTGAAGCGAATTGGATCGAATCTAATCGAAGAGAAGC
GAGAGTACAAAAGAGAGACGCAATCACGACGAGGAAGCGAAAGAGCCAAA
ACGACGTCGGACAGATGGGTGTAGATTATTACAAAATTCTCCAAGTAGAC
CGAAACGCCAAGGAGGAAGATTTGAAGAAAGCGTATCGGAAGCTCGCAAT
GAAGTGGCATCCCGATAAGAACCCTAACAACAAGAAAGATGCCGAGGCCA
AATTTAAACAAATCTCCGAAGCTTACGACGTTCTGAGTGATCCGCAAAAG
AGAGCGGTATATGATCAGTACGGAGAAGAAGGTTTGAAAGGCCAGATGCC
GCCACCTGGCGCGAGCGGGTTTCCGGGCGCTGGTGCCGGCGCTGGAGGTC
CGACGTCGTTTCGGTTCAATACGAGAAATCCTGAGGATATATTCTCGGAG
TTCTTCGGATTTTCGAGCCCGTTTGGAGACATGGGCGGTTCGCGCGCCAG
TGCGTCGGGATTTCCTAGAGGTATGTTTGGTGATGATATATTTGCGTCGT
TTAATAGAGGGTCGGCCGGAGAAGGGTCGGCGAATGCGCTGAGAAAAGCA
GCGCCTATTGAACGAACATTACCGTGTAGTTTGGAAGACTTGTATAAGGG
AACCACTAAGAAGATGAAGATTTCAAGAGATGTTATCGATGCTAGTGGAC
GACCCAACACTACGGAAGAAATTCTTACAATTGAAATCAAGCCAGGGTGG
AAGAAAGGTACGAAAATCACGTTCCCAGAGAAAGGAAATGAACTGCGGAA
TGTTATACCCTCAGACCTTATCTTCATCATTGATGAGAAACCTCATAGCC
TCTTCAAGAGGGATGGTAATGATCTTGTTGTCACCCAAAAGATATCTCTC
GTGGAAGCTCTG
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