FC917857
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC917857 vs. ExPASy Swiss-Prot
Match: INO80_VANPO (Putative DNA helicase INO80 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=INO80 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.414e-25 Identity = 54/103 (52.43%), Postives = 74/103 (71.84%), Query Frame = 1 Query: 577 LVTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIR 885 ++ QPS + +++YQL GLNWL LY+ GINGILADEMGLGKT+Q+IS+L +L E I GP +VV P STL NW+NEI +F P + + + GN +R+ +R Sbjct: 789 VIEQPSILACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAEKYNIWGPFLVVTPASTLHNWVNEISKFVPQFKILPYWGNSNDRKILR 891
BLAST of FC917857 vs. ExPASy Swiss-Prot
Match: INO80_CANAL (Putative DNA helicase INO80 OS=Candida albicans GN=INO80 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.414e-25 Identity = 53/103 (51.46%), Postives = 74/103 (71.84%), Query Frame = 1 Query: 580 VTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE 888 + QP+ ++ +++YQL GLNWL LYE GINGILADEMGLGKT+Q+IS+L YL E + GP +VV P STL NW EI +F P + + + GN ++R+ +R+ Sbjct: 662 IPQPNMLKCTLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVLAYLAETYNMWGPFLVVTPASTLHNWQQEITKFVPEFKVLPYWGNAKDRKILRK 764
BLAST of FC917857 vs. ExPASy Swiss-Prot
Match: ISW2_YEAST (ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyces cerevisiae GN=ISW2 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 3.152e-25 Identity = 72/191 (37.70%), Postives = 98/191 (51.31%), Query Frame = 1 Query: 403 RLKYLLQQTELFSHF----AKGDQ----------------SASQKKAKGRGRHASKLTXXXXXXXXXXXXXDGLSNTR----LVTQPSCIQ-GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLV 900 R KYLL T+LF HF AK D+ S S RH K + + + + PS ++ GK+RDYQ+ GLNWLI L+EN ++GILADEMGLGKTLQTIS LGYL + I GP +++ PKSTL NW E ++ P + + G+ + R I N+++ Sbjct: 90 RFKYLLGVTDLFRHFIGIKAKHDKNIQKLLKQLDSDANKLSKSHSTVSSSSRHHRKTEKEEDAELMADEEEEIVDTYQEDIFVSESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIEGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIIL 280
BLAST of FC917857 vs. ExPASy Swiss-Prot
Match: INO80_NEUCR (Putative DNA helicase ino-80 OS=Neurospora crassa GN=ino-80 PE=3 SV=3) HSP 1 Score: 115.931 bits (289), Expect = 3.152e-25 Identity = 60/140 (42.86%), Postives = 84/140 (60.00%), Query Frame = 1 Query: 469 SQKKAKGRGRHASKLTXXXXXXXXXXXXXDGLSNTRLVTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE 888 +QKKA+ + SKL + + QP + ++++YQL GLNWL+ LYE GINGILADEMGLGKT+Q+IS++ YL E I GP +VVAP STL NW EI +F P + + + G +R+ +R+ Sbjct: 1075 AQKKAREFNKEESKLDEDGEMNFQNPTMMGDVE----IEQPKLLNCQLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTVQSISVMAYLAEKYDIWGPFLVVAPASTLHNWQQEITKFVPQFKVLPYWGTAGDRKVLRK 1210
BLAST of FC917857 vs. ExPASy Swiss-Prot
Match: INO80_YEAST (Putative DNA helicase INO80 OS=Saccharomyces cerevisiae GN=INO80 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.117e-25 Identity = 53/103 (51.46%), Postives = 73/103 (70.87%), Query Frame = 1 Query: 580 VTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE 888 + QP + +++YQL GLNWL LY+ GINGILADEMGLGKT+Q+IS+L +L E I GP +VV P STL NW+NEI +F P + + + GN +R+ +R+ Sbjct: 696 IEQPKILACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAENHNIWGPFLVVTPASTLHNWVNEISKFLPQFKILPYWGNANDRKVLRK 798
BLAST of FC917857 vs. ExPASy Swiss-Prot
Match: INO80_YEAS7 (Putative DNA helicase INO80 OS=Saccharomyces cerevisiae (strain YJM789) GN=INO80 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.117e-25 Identity = 53/103 (51.46%), Postives = 73/103 (70.87%), Query Frame = 1 Query: 580 VTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE 888 + QP + +++YQL GLNWL LY+ GINGILADEMGLGKT+Q+IS+L +L E I GP +VV P STL NW+NEI +F P + + + GN +R+ +R+ Sbjct: 702 IEQPKILACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAENHNIWGPFLVVTPASTLHNWVNEISKFLPQFKILPYWGNANDRKVLRK 804
BLAST of FC917857 vs. ExPASy Swiss-Prot
Match: INO80_LODEL (Putative DNA helicase ino80 OS=Lodderomyces elongisporus GN=INO80 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 7.023e-25 Identity = 52/103 (50.49%), Postives = 73/103 (70.87%), Query Frame = 1 Query: 580 VTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE 888 + QP ++ +++YQ+ GLNWL LYE GINGILADEMGLGKT+Q+IS+L YL E I GP +VV P STL NW EI +F P + + + G+ ++R+ +R+ Sbjct: 727 IEQPKMLKCTLKEYQIKGLNWLANLYEQGINGILADEMGLGKTVQSISVLSYLAETHNIWGPFLVVTPASTLHNWQQEISKFVPNFKVLPYWGHAKDRKVLRK 829
BLAST of FC917857 vs. ExPASy Swiss-Prot
Match: INO80_KLULA (Putative DNA helicase INO80 OS=Kluyveromyces lactis GN=INO80 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 7.023e-25 Identity = 53/103 (51.46%), Postives = 73/103 (70.87%), Query Frame = 1 Query: 580 VTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE 888 + QP + +++YQL GLNWL LY+ GINGILADEMGLGKT+Q+IS+L +L + I GP +VV P STL NW+NEI RF P + + + GN +R+ +R+ Sbjct: 736 IDQPKMLACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRK 838
BLAST of FC917857 vs. ExPASy Swiss-Prot
Match: INO80_CANGA (Putative DNA helicase INO80 OS=Candida glabrata GN=INO80 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 9.172e-25 Identity = 52/103 (50.49%), Postives = 73/103 (70.87%), Query Frame = 1 Query: 580 VTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE 888 + QP + +++YQL GLNWL LY+ GINGILADEMGLGKT+Q+IS+L +L E I GP +VV P STL NW+NEI +F P + + + G+ +R+ +R+ Sbjct: 712 IEQPKMLACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAEHHNIWGPFLVVTPASTLHNWVNEISKFVPQFKILPYWGSANDRKVLRK 814
BLAST of FC917857 vs. ExPASy Swiss-Prot
Match: INO80_ASHGO (Putative DNA helicase INO80 OS=Ashbya gossypii GN=INO80 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.198e-24 Identity = 53/102 (51.96%), Postives = 73/102 (71.57%), Query Frame = 1 Query: 580 VTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIR 885 + QP + +++YQL GLNWL LY+ GINGILADEMGLGKT+Q+IS+L +L E I GP +VV P STL NW+NEI++F P + + + GN +R+ +R Sbjct: 645 IEQPKILACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAERYNIWGPFIVVTPASTLHNWVNEIQKFVPDFKILPYWGNGNDRKILR 746 The following BLAST results are available for this feature:
BLAST of FC917857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC917857 ID=FC917857; Name=FC917857; organism=Citrus clementina; type=EST; length=904bpback to top |