FC918054
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC918054 vs. ExPASy Swiss-Prot
Match: RER1_YEAST (Protein RER1 OS=Saccharomyces cerevisiae GN=RER1 PE=1 SV=2) HSP 1 Score: 176.022 bits (445), Expect = 2.639e-43 Identity = 79/156 (50.64%), Postives = 108/156 (69.23%), Query Frame = 1 Query: 55 YQHLLDKSVPHVLHRWVVCLAVVSIYAVRVYLVQGFYIITYGLGIYLLNLLMGFLSPQID----PEYSDGPTLPTRGSDEFRPFVRRLPEFKFWYCVTRSFCIGFVLTFFSAFDVPVFWPILLFYWLMLFTLTMRRQIMHMIKYRYVPFSLGKQRY 510 YQH LDK PH RW V ++ ++ VR+ + +G+Y+I YGLG++LLN + FL+P+ D + + S+EFRPF+RRLPEFKFWY R+ I +L+ FS FD+PVFWPILL Y+++LF LTMRRQI HMIKYRY+P +GK++Y Sbjct: 28 YQHYLDKVTPHAKERWAVLGGLLCLFMVRITMAEGWYVICYGLGLFLLNQFLAFLTPKFDMSLQQDEENNELEAGEKSEEFRPFIRRLPEFKFWYNSIRATVISLLLSLFSIFDIPVFWPILLMYFILLFFLTMRRQIQHMIKYRYIPLDIGKKKY 183
BLAST of FC918054 vs. ExPASy Swiss-Prot
Match: RER1_SCHPO (Protein rer1 OS=Schizosaccharomyces pombe GN=rer1 PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 3.447e-43 Identity = 79/163 (48.47%), Postives = 112/163 (68.71%), Query Frame = 1 Query: 49 RRYQHLLDKSVPHVLHRWVVCLAVVSIYAVRVYLVQGFYIITYGLGIYLLNLLMGFLSPQIDP---------EYSDGPTLPTRGSDEFRPFVRRLPEFKFWYCVTRSFCIGFVLTFFSAFDVPVFWPILLFYWLMLFTLTMRRQIMHMIKYRYVPFSLGKQRY 510 R Y+H +D+++P+ +RW+ +++++ +R+ LV+G+YI+ Y L IYLLNL + FL+P+ DP E +G LPT DEFRPF+RRLPEFKFWY R+ V +FF FDVPVFWPIL+ Y+L+L RRQI HM+KYRYVPF +GK+++ Sbjct: 20 RLYRHWVDRTIPYTTYRWLTVSGLIALFFIRILLVRGWYIVCYTLAIYLLNLFLAFLTPKFDPSVEQAMKDEEIEEG-VLPTSKDDEFRPFIRRLPEFKFWYSSMRATLFALVASFFRIFDVPVFWPILVVYYLVLSFFCFRRQIQHMLKYRYVPFDIGKKKF 181
BLAST of FC918054 vs. ExPASy Swiss-Prot
Match: RER1_SACPS (Protein RER1 OS=Saccharomyces pastorianus GN=RER1 PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 3.447e-43 Identity = 79/156 (50.64%), Postives = 108/156 (69.23%), Query Frame = 1 Query: 55 YQHLLDKSVPHVLHRWVVCLAVVSIYAVRVYLVQGFYIITYGLGIYLLNLLMGFLSPQID----PEYSDGPTLPTRGSDEFRPFVRRLPEFKFWYCVTRSFCIGFVLTFFSAFDVPVFWPILLFYWLMLFTLTMRRQIMHMIKYRYVPFSLGKQRY 510 YQH LDK PH RW V ++ ++ VR+ + +G+Y+I YGLG++LLN + FL+P+ D + + S+EFRPF+RRLPEFKFWY R+ I VL+ FS FD+PVFWPILL Y+++LF LTMRRQI HM+KYRY+P +GK++Y Sbjct: 28 YQHYLDKVTPHAKQRWAVLGGLLCLFMVRITMAEGWYVICYGLGLFLLNQFLAFLTPKFDMSLQQDEENNELEAGEKSEEFRPFIRRLPEFKFWYNSIRATVISLVLSLFSIFDIPVFWPILLMYFVLLFFLTMRRQIQHMMKYRYIPLDIGKKKY 183
BLAST of FC918054 vs. ExPASy Swiss-Prot
Match: RER1_DICDI (Protein RER1 homolog OS=Dictyostelium discoideum GN=rer1 PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.957e-38 Identity = 74/162 (45.68%), Postives = 113/162 (69.75%), Query Frame = 1 Query: 43 VSRRYQHLLDKSVPHVLHRWVVCLAVVSIYAVRVYLVQG-FYIITYGLGIYLLNLLMGFLSPQIDPEYSD--GPTLPT---RGSDEFRPFVRRLPEFKFWYCVTRSFCIGFVLTFFSAFDVPVFWPILLFYWLMLFTLTMRRQIMHMIKYRYVPFSLGKQRY 510 ++R+YQ+L++K++ + RW + +Y +RV L G +Y+ITY LGI+LL + FLSP+ DPE + G +LPT R DE +PF+RRLPEF FW+ + ++ I TF D+PVFWPILL Y++++F++TM++QI HMIKY+Y+PF++GK+ Y Sbjct: 22 IARKYQNLIEKTISFIPQRWAFVGFLSFLYILRVSLSSGGWYVITYALGIFLLTRFIAFLSPKWDPELEEDSGDSLPTTLNRNDDEAKPFIRRLPEFLFWHSIFKALFISIFCTFIPFLDLPVFWPILLLYFIIIFSVTMKKQIKHMIKYKYIPFTVGKKTY 183 The following BLAST results are available for this feature:
BLAST of FC918054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC918054 ID=FC918054; Name=FC918054; organism=Citrus clementina; type=EST; length=925bpback to top |