FC918122

Overview
NameFC918122
Unique NameFC918122
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length799
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC918122 vs. ExPASy Swiss-Prot
Match: AAT3_ARATH (Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP3 PE=1 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 8.216e-64
Identity = 125/253 (49.41%), Postives = 163/253 (64.43%), Query Frame = 1
Query:   43 SAQASKLRLQLQSSVRAASAWSQVPQGPPDAILGITEAFKADSHPEKINLGVGAYRDDKGKPYVLPSVKEAEQRVVK-KNLDKEYAGITGVPDFTKAAAVLAYGADSAPLKEGRVVITQSISGTGALRIGGAFLERFYPGDKTIYIPNPSWANHNAVFKDSGLKVEKYRYYNKDTIGLDFEGMVEDIKNMPKGSIVLLHACAHNPTGVDPTEDQWRALSDVVKENGHYPFFDMAYQGFASGDTDKDAFPIRHF 798
            S   S L     S     S +S + Q P D ILG+T A+  D  P K+NLGVGAYR ++GKP VL  V++AEQ+++  +   KEY  I G+ +F K +A L  GADS  ++E R+   + +SGTG+LR+GG FL + Y   KTIYI  P+W NH  +F  +GL V+ YRYY+  T GL+F+G++ED+     GSIVLLHACAHNPTGVDPT  QW  +  +++  G  PFFD AYQGFASG  D DA PIR F
Sbjct:   29 SDNLSSLYASPTSGGTGGSVFSHLVQAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLINDRTRIKEYLPIVGLVEFNKLSAKLILGADSPAIRENRITTVECLSGTGSLRVGGEFLAKHYH-QKTIYITQPTWGNHPKIFTLAGLTVKTYRYYDPATRGLNFQGLLEDLGAAAPGSIVLLHACAHNPTGVDPTIQQWEQIRKLMRSKGLMPFFDSAYQGFASGSLDTDAKPIRMF 280          
BLAST of FC918122 vs. ExPASy Swiss-Prot
Match: AATC_PANTR (Aspartate aminotransferase, cytoplasmic OS=Pan troglodytes GN=GOT1 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.186e-62
Identity = 118/240 (49.17%), Postives = 162/240 (67.50%), Query Frame = 1
Query:   97 SAWSQVPQGPPDAILGITEAFKADSHPEKINLGVGAYRDDKGKPYVLPSVKEAEQRVVKKN-LDKEYAGITGVPDFTKAAAVLAYGADSAPLKEGRVVITQSISGTGALRIGGAFLERFYPGDKT----IYIPNPSWANHNAVFKDSGLK-VEKYRYYNKDTIGLDFEGMVEDIKNMPKGSIVLLHACAHNPTGVDPTEDQWRALSDVVKENGHYPFFDMAYQGFASGDTDKDAFPIRHF 798
            S +++VPQ  P  +  +T  F+ D  P K+NLGVGAYR D   P+VLP VK+ EQ++   N L+ EY  I G+ +F   A+ LA G DS  LKE RV   QS+ GTGALRIG  FL R+Y G       +Y+ +P+W NHNAVF  +G K +  YRY++ +  GLD +G + D++N P+ SIV+LHACAHNPTG+DPT +QW+ ++ V+K    +PFFD AYQGFASG+ ++DA+ IR+F
Sbjct:    5 SVFAEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIVVLHACAHNPTGIDPTPEQWKQIASVMKHRFLFPFFDSAYQGFASGNLERDAWAIRYF 244          
BLAST of FC918122 vs. ExPASy Swiss-Prot
Match: AATC_HUMAN (Aspartate aminotransferase, cytoplasmic OS=Homo sapiens GN=GOT1 PE=1 SV=3)

HSP 1 Score: 239.965 bits (611), Expect = 1.186e-62
Identity = 118/240 (49.17%), Postives = 162/240 (67.50%), Query Frame = 1
Query:   97 SAWSQVPQGPPDAILGITEAFKADSHPEKINLGVGAYRDDKGKPYVLPSVKEAEQRVVKKN-LDKEYAGITGVPDFTKAAAVLAYGADSAPLKEGRVVITQSISGTGALRIGGAFLERFYPGDKT----IYIPNPSWANHNAVFKDSGLK-VEKYRYYNKDTIGLDFEGMVEDIKNMPKGSIVLLHACAHNPTGVDPTEDQWRALSDVVKENGHYPFFDMAYQGFASGDTDKDAFPIRHF 798
            S +++VPQ  P  +  +T  F+ D  P K+NLGVGAYR D   P+VLP VK+ EQ++   N L+ EY  I G+ +F   A+ LA G DS  LKE RV   QS+ GTGALRIG  FL R+Y G       +Y+ +P+W NHNAVF  +G K +  YRY++ +  GLD +G + D++N P+ SIV+LHACAHNPTG+DPT +QW+ ++ V+K    +PFFD AYQGFASG+ ++DA+ IR+F
Sbjct:    5 SVFAEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIVVLHACAHNPTGIDPTPEQWKQIASVMKHRFLFPFFDSAYQGFASGNLERDAWAIRYF 244          
BLAST of FC918122 vs. ExPASy Swiss-Prot
Match: AATC_PONAB (Aspartate aminotransferase, cytoplasmic OS=Pongo abelii GN=GOT1 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.550e-62
Identity = 118/240 (49.17%), Postives = 162/240 (67.50%), Query Frame = 1
Query:   97 SAWSQVPQGPPDAILGITEAFKADSHPEKINLGVGAYRDDKGKPYVLPSVKEAEQRVVKKN-LDKEYAGITGVPDFTKAAAVLAYGADSAPLKEGRVVITQSISGTGALRIGGAFLERFYPGDKT----IYIPNPSWANHNAVFKDSGLK-VEKYRYYNKDTIGLDFEGMVEDIKNMPKGSIVLLHACAHNPTGVDPTEDQWRALSDVVKENGHYPFFDMAYQGFASGDTDKDAFPIRHF 798
            S +++VPQ  P  +  +T  F+ D  P K+NLGVGAYR D   P+VLP VK+ EQ++   N L+ EY  I G+ +F   A+ LA G DS  LKE RV   QS+ GTGALRIG  FL R+Y G       +Y+ +P+W NHNAVF  +G K +  YRY++ +  GLD +G++ D++N P+ SIV+LHACAHNPTG DPT +QW+ ++ V+K    +PFFD AYQGFASG+ ++DA+ IR+F
Sbjct:    5 SVFAEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGLLNDLENAPEFSIVVLHACAHNPTGTDPTPEQWKQIASVMKHRFLFPFFDSAYQGFASGNLERDAWAIRYF 244          
BLAST of FC918122 vs. ExPASy Swiss-Prot
Match: AATC_MACFA (Aspartate aminotransferase, cytoplasmic OS=Macaca fascicularis GN=GOT1 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.550e-62
Identity = 118/240 (49.17%), Postives = 161/240 (67.08%), Query Frame = 1
Query:   97 SAWSQVPQGPPDAILGITEAFKADSHPEKINLGVGAYRDDKGKPYVLPSVKEAEQRVVKKN-LDKEYAGITGVPDFTKAAAVLAYGADSAPLKEGRVVITQSISGTGALRIGGAFLERFYPGDKT----IYIPNPSWANHNAVFKDSGLK-VEKYRYYNKDTIGLDFEGMVEDIKNMPKGSIVLLHACAHNPTGVDPTEDQWRALSDVVKENGHYPFFDMAYQGFASGDTDKDAFPIRHF 798
            S +S+VPQ  P  +  +T  F+ D  P K+NLGVGAYR D   P+VLP VK+ EQ++   N L+ EY  I G+ +F   A+ LA G DS  LKE RV   QS+ GTGALRIG  FL R+Y G       +Y+ +P+W NHNAVF  +G K +  YRY++ +  GLD +G + D++N P+ SI++LHACAHNPTG DPT +QW+ ++ V+K    +PFFD AYQGFASG+ ++DA+ IR+F
Sbjct:    5 SVFSEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIIVLHACAHNPTGTDPTPEQWKQIASVMKHRFLFPFFDSAYQGFASGNLERDAWAIRYF 244          
BLAST of FC918122 vs. ExPASy Swiss-Prot
Match: AATC_YEAST (Aspartate aminotransferase, cytoplasmic OS=Saccharomyces cerevisiae GN=AAT2 PE=1 SV=3)

HSP 1 Score: 237.269 bits (604), Expect = 7.690e-62
Identity = 110/235 (46.81%), Postives = 154/235 (65.53%), Query Frame = 1
Query:   91 AASAWSQVPQGPPDAILGITEAFKADSHPEKINLGVGAYRDDKGKPYVLPSVKEAEQRVVK-KNLDKEYAGITGVPDFTKAAAVLAYGADSAPLKEGRVVITQSISGTGALRIGGAFLERFYPGDKTIYIPNPSWANHNAVFKDSGLKVEKYRYYNKDTIGLDFEGMVEDIKNMPKGSIVLLHACAHNPTGVDPTEDQWRALSDVVKENGHYPFFDMAYQGFASGDTDKDAFPIR 792
            +A+ ++ +   PPDA+ GI + +  D    K++LG+GAYRDD GKP+VLPSVK AE+ +    + + EY GITG+P  T  AA + +G  S   +E RV+  QS+SGTGAL I   F  +F+P DK +Y+  P+WANH A+F++ GLK   Y Y+  +T  LD  G +  I+  P+GSI +LH+CAHNPTG+DPT +QW  + D +    H   FD AYQGFA+GD DKDA+ +R
Sbjct:    2 SATLFNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDAFQEDRVISVQSLSGTGALHISAKFFSKFFP-DKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVR 235          
BLAST of FC918122 vs. ExPASy Swiss-Prot
Match: AATC_CHICK (Aspartate aminotransferase, cytoplasmic OS=Gallus gallus GN=GOT1 PE=1 SV=3)

HSP 1 Score: 236.884 bits (603), Expect = 1.004e-61
Identity = 114/242 (47.11%), Postives = 164/242 (67.77%), Query Frame = 1
Query:   91 AASAWSQVPQGPPDAILGITEAFKADSHPEKINLGVGAYRDDKGKPYVLPSVKEAEQRVVKK-NLDKEYAGITGVPDFTKAAAVLAYGADSAPLKEGRVVITQSISGTGALRIGGAFLERFYPGDKT----IYIPNPSWANHNAVFKDSGLK-VEKYRYYNKDTIGLDFEGMVEDIKNMPKGSIVLLHACAHNPTGVDPTEDQWRALSDVVKENGHYPFFDMAYQGFASGDTDKDAFPIRHF 798
            AAS ++ VP+ PP A+  +T  F+ D    K+NLGVGAYR D+G+P+VLP V++ EQ +    +L+ EY  I G+P+F   A+ +A G DS  + + RV   Q + GTGALRIG  FL R+Y G+      +Y+ +P+W NHN+VF D+G K +  YRY++    GLD +G+++D++  P+ SI +LHACAHNPTG DPT D+W+ ++ V+K    +PFFD AYQGFASG  DKDA+ +R+F
Sbjct:    2 AASIFAAVPRAPPVAVFKLTADFREDGDSRKVNLGVGAYRTDEGQPWVLPVVRKVEQLIAGDGSLNHEYLPILGLPEFRANASRIALGDDSPAIAQKRVGSVQGLGGTGALRIGAEFLRRWYNGNNNTATPVYVSSPTWENHNSVFMDAGFKDIRTYRYWDAAKRGLDLQGLLDDMEKAPEFSIFILHACAHNPTGTDPTPDEWKQIAAVMKRRCLFPFFDSAYQGFASGSLDKDAWAVRYF 243          
BLAST of FC918122 vs. ExPASy Swiss-Prot
Match: AATC_MOUSE (Aspartate aminotransferase, cytoplasmic OS=Mus musculus GN=Got1 PE=1 SV=2)

HSP 1 Score: 234.958 bits (598), Expect = 3.817e-61
Identity = 115/240 (47.92%), Postives = 162/240 (67.50%), Query Frame = 1
Query:   97 SAWSQVPQGPPDAILGITEAFKADSHPEKINLGVGAYRDDKGKPYVLPSVKEAEQRVVKKN-LDKEYAGITGVPDFTKAAAVLAYGADSAPLKEGRVVITQSISGTGALRIGGAFLERFYPG----DKTIYIPNPSWANHNAVFKDSGLK-VEKYRYYNKDTIGLDFEGMVEDIKNMPKGSIVLLHACAHNPTGVDPTEDQWRALSDVVKENGHYPFFDMAYQGFASGDTDKDAFPIRHF 798
            S ++QVPQ PP  +  +T  F+ D  P K+NLGVGAYR D+ +P+VLP V++ EQ++   N L+ EY  I G+ +F   A+ L  G +S  ++E RV   QS+ GTGALRIG  FL R+Y G    +  IY+ +P+W NHNAVF  +G K +  Y Y++ +  GLD +G + D++N P+ SI +LHACAHNPTG DPT +QW+ ++ V++    +PFFD AYQGFASGD +KDA+ IR+F
Sbjct:    5 SVFAQVPQAPPVLVFKLTADFRDDPDPRKVNLGVGAYRTDESQPWVLPVVRKVEQKIANDNSLNHEYLPILGLAEFRSCASRLVLGDNSPAIRENRVGGVQSLGGTGALRIGADFLGRWYNGTDNKNTPIYVSSPTWENHNAVFSAAGFKDIRPYCYWDAEKRGLDLQGFLNDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIAAVMQRRFLFPFFDSAYQGFASGDLEKDAWAIRYF 244          
BLAST of FC918122 vs. ExPASy Swiss-Prot
Match: AATC_RAT (Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus GN=Got1 PE=1 SV=3)

HSP 1 Score: 234.572 bits (597), Expect = 4.985e-61
Identity = 114/240 (47.50%), Postives = 161/240 (67.08%), Query Frame = 1
Query:   97 SAWSQVPQGPPDAILGITEAFKADSHPEKINLGVGAYRDDKGKPYVLPSVKEAEQRVVKKN-LDKEYAGITGVPDFTKAAAVLAYGADSAPLKEGRVVITQSISGTGALRIGGAFLERFYPG----DKTIYIPNPSWANHNAVFKDSGLK-VEKYRYYNKDTIGLDFEGMVEDIKNMPKGSIVLLHACAHNPTGVDPTEDQWRALSDVVKENGHYPFFDMAYQGFASGDTDKDAFPIRHF 798
            S ++QVPQ PP  +  +   F+ D  P K+NLGVGAYR D  +P+VLP V++ EQ++   + L+ EY  I G+ +F   A+ L  G +S  L+E RV   QS+ GTGALRIG  FL R+Y G    +  +Y+ +P+W NHN VF  +G K +  YRY++ +  GLD +G + D++N P+ SI +LHACAHNPTG DPTE++W+ ++ V+K    +PFFD AYQGFASGD +KDA+ IR+F
Sbjct:    5 SFFAQVPQAPPVLVFKLIADFRDDPDPRKVNLGVGAYRTDDSQPWVLPVVRKVEQKIANDHSLNHEYLPILGLAEFRSCASQLVLGDNSPALRENRVGGVQSLGGTGALRIGADFLGRWYNGTDNKNTPVYVSSPTWENHNGVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIFVLHACAHNPTGTDPTEEEWKQIAAVMKRRFLFPFFDSAYQGFASGDLEKDAWAIRYF 244          
BLAST of FC918122 vs. ExPASy Swiss-Prot
Match: AATC_PIG (Aspartate aminotransferase, cytoplasmic OS=Sus scrofa GN=GOT1 PE=1 SV=3)

HSP 1 Score: 233.802 bits (595), Expect = 8.503e-61
Identity = 115/240 (47.92%), Postives = 160/240 (66.67%), Query Frame = 1
Query:   97 SAWSQVPQGPPDAILGITEAFKADSHPEKINLGVGAYRDDKGKPYVLPSVKEAEQRVVK-KNLDKEYAGITGVPDFTKAAAVLAYGADSAPLKEGRVVITQSISGTGALRIGGAFLERFYPG----DKTIYIPNPSWANHNAVFKDSGLK-VEKYRYYNKDTIGLDFEGMVEDIKNMPKGSIVLLHACAHNPTGVDPTEDQWRALSDVVKENGHYPFFDMAYQGFASGDTDKDAFPIRHF 798
            S +++VPQ  P  +  +   F+ D  P K+NLGVGAYR D  +P+VLP V++ EQR+    +L+ EY  I G+ +F   A+ LA G DS  L+E RV   QS+ GTGALRIG  FL R+Y G    D  +Y+ +P+W NHN VF  +G K +  YRY++ +  GLD +G + D++N P+ SI +LHACAHNPTG DPT +QW+ ++ V+K    +PFFD AYQGFASG+ +KDA+ IR+F
Sbjct:    5 SVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANDSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYF 244          
The following BLAST results are available for this feature:
BLAST of FC918122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
AAT3_ARATH8.216e-6449.41Aspartate aminotransferase, chloroplastic OS=Arabi... [more]
AATC_PANTR1.186e-6249.17Aspartate aminotransferase, cytoplasmic OS=Pan tro... [more]
AATC_HUMAN1.186e-6249.17Aspartate aminotransferase, cytoplasmic OS=Homo sa... [more]
AATC_PONAB1.550e-6249.17Aspartate aminotransferase, cytoplasmic OS=Pongo a... [more]
AATC_MACFA1.550e-6249.17Aspartate aminotransferase, cytoplasmic OS=Macaca ... [more]
AATC_YEAST7.690e-6246.81Aspartate aminotransferase, cytoplasmic OS=Sacchar... [more]
AATC_CHICK1.004e-6147.11Aspartate aminotransferase, cytoplasmic OS=Gallus ... [more]
AATC_MOUSE3.817e-6147.92Aspartate aminotransferase, cytoplasmic OS=Mus mus... [more]
AATC_RAT4.985e-6147.50Aspartate aminotransferase, cytoplasmic OS=Rattus ... [more]
AATC_PIG8.503e-6147.92Aspartate aminotransferase, cytoplasmic OS=Sus scr... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA64AD10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA64AD10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918122 ID=FC918122; Name=FC918122; organism=Citrus clementina; type=EST; length=799bp
ATACCCAAGATGCTGTCAGGATCTAGAACTGCTTTGAGAGCATCCGCTCA
AGCTTCCAAGCTTCGTCTGCAGCTGCAGTCTAGCGTCAGAGCTGCCTCGG
CCTGGTCGCAAGTGCCCCAAGGACCTCCCGATGCCATCCTTGGTATCACC
GAGGCCTTCAAGGCCGACAGCCACCCCGAGAAGATCAACCTCGGTGTTGG
TGCATACCGCGACGACAAGGGCAAGCCCTACGTCCTGCCCTCCGTGAAGG
AGGCCGAGCAAAGAGTCGTCAAGAAGAACCTTGACAAGGAATACGCTGGC
ATTACCGGTGTGCCCGACTTCACCAAGGCCGCCGCTGTCCTCGCATACGG
TGCCGACTCAGCACCTCTCAAGGAGGGCAGAGTCGTCATCACCCAGTCAA
TCTCTGGTACTGGTGCCCTCAGAATCGGTGGTGCTTTCCTCGAGCGCTTC
TACCCTGGCGACAAGACCATCTACATTCCCAACCCCAGTTGGGCCAACCA
CAATGCCGTCTTCAAGGACTCAGGCCTCAAGGTCGAGAAGTACCGCTACT
ACAACAAGGACACCATCGGTCTCGACTTTGAGGGTATGGTTGAGGACATC
AAGAACATGCCCAAGGGCAGCATTGTCCTTCTCCACGCTTGCGCGCACAA
CCCCACTGGTGTCGACCCCACCGAGGACCAATGGCGCGCTCTGAGCGACG
TTGTCAAGGAAAACGGACACTACCCCTTCTTCGACATGGCCTACCAGGGC
TTTGCCAGTGGTGACACTGACAAGGACGCTTTCCCCATCCGCCACTTTA
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