FC918123 | Citrus Genome Database

Overview


Name	FC918123
Unique Name	FC918123
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	821

Libraries


Library Name	Type
IVIA1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of FC918123 vs. ExPASy Swiss-Prot
Match: PABP_YARLI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Yarrowia lipolytica GN=PAB1 PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.247e-46
Identity = 115/280 (41.07%), Postives = 167/280 (59.64%), Query Frame = 1

Query:    4 VYVGHFLRRLER--DTEISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFA---QMRPVAMASTVAPRMPMYXXXXXXIEQQIFYGQGPPAMIPPQPA---FGYQQQLVPGMRP 819
            V+VG  + + +R    E  K+ FTNV++KNL    TE + ++   ++G  +S  +  + +GK   FGFV+++  D A +A++ L+  +F   + + G+A+KK ER  EL+ Q+E +  E  +K+QG NLYIKNLDD+IDD+KL+  F+P G ITS KVM D  G S+G GFV +S+PEEA+ A+ EMN R+V  KPLYV LA RK+ RR++LQ Q     QMR    A+  A  +P            +FY  G P  +PP      FG   Q++  MRP
Sbjct:  204 VFVGPHVPKSDRMQSFEEQKNSFTNVFIKNLGTEITEAEFEELVNKFGETSSVHLSTNDEGKPTGFGFVDYKEHDVAVKAIDGLSETEFKGNKLFAGRAKKKYERADELRKQYEASRLEKLNKYQGVNLYIKNLDDTIDDDKLRAEFAPHGTITSAKVMVDEAGKSKGFGFVCYSSPEEATKAVTEMNHRLVAGKPLYVVLAQRKDVRRSQLQQQIQAKNQMRLQQQAA--AGGLPGQYMG----NPGVFY-PGQPGFMPPGRGGMPFGANPQMM--MRP 474

HSP 2 Score: 94.7449 bits (234), Expect = 6.450e-19
Identity = 65/204 (31.86%), Postives = 96/204 (47.06%), Query Frame = 1

Query:   34 ERDTEISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDG-DGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQ 642
            E+ ++  +    ++YV  L  S TE  L + F   G + S  V RD    +S  + +VNF N  D  RA+E LN     ++   +  +Q+                  A  K    N+YIKNLD +ID++ L   FS FG I SCK+  D  G SRG GFV + + E A  A+  +NG ++  K ++V     K DR    + Q
Sbjct:   35 EKGSKEDQGDNASLYVGELDPSVTEAMLFEIFNPIGPVTSVRVCRDAITRRSLGYAYVNFHNQADGIRALEELNYSPIKERPCRIMWSQRDP----------------ALRKTGAGNIYIKNLDPAIDNKALHDTFSAFGQILSCKIATDEFGNSRGFGFVHYESAESAESAIQHVNGMLLNDKKVFVGPHVPKSDRMQSFEEQ 222

[Close]

BLAST of FC918123 vs. ExPASy Swiss-Prot
Match: PABP_PHANO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Phaeosphaeria nodorum GN=PAB1 PE=3 SV=3)

HSP 1 Score: 186.422 bits (472), Expect = 1.629e-46
Identity = 110/267 (41.20%), Postives = 151/267 (56.55%), Query Frame = 1

Query:    4 VYVGHFLRRLERDTEIS--KSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKV-MRDPR----------------------------------------------------GISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQA 639
            V+VGH + + ER ++    K+ FTN+YVKN+    T+ED ++ F ++G I SA + RD  GKS+ FGFVN+   + AA AV+ LN  +F  ++ YVG+AQKK ERE EL+ Q+E    E   K+QG NLYIKNL+D +DDEKL+ +F+PFG ITS KV +RD                                                      G S+G GFV FS P+EA+ A+ EMN +M+  KPLYVALA RK+ R+ +L+A
Sbjct:  206 VFVGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVTDEDFRELFEKHGDITSASIARDDQGKSRGFGFVNYIRHEAAAVAVDHLNDIEFKGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVILRDEEKKDEEEKEVKEEKKEDEKKEDEEAKEGSSSEQNGEDTKAGDKVTIKGEKKILGKSKGFGFVCFSNPDEATKAVTEMNQKMIEGKPLYVALAQRKDVRKNQLEA 472

HSP 2 Score: 120.168 bits (300), Expect = 1.434e-26
Identity = 71/208 (34.13%), Postives = 113/208 (54.33%), Query Frame = 1

Query:   34 ERDTEISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQMR 657
            +RD  + K+   NV++KNL  +   + L  +F  +G I S  V +D  G SK +GFV++E ++ A  A++ +NG   ++K+ +VG    K ER      +FE+       K   TN+Y+KN+D  + DE  + LF   G+ITS  + RD +G SRG GFV +   E A++A+  +N      + LYV  A +K +R   L+ Q+   R
Sbjct:  125 QRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKER----MSKFEEM------KANFTNIYVKNIDLDVTDEDFRELFEKHGDITSASIARDDQGKSRGFGFVNYIRHEAAAVAVDHLNDIEFKGQKLYVGRAQKKHEREEELRKQYEAAR 322

HSP 3 Score: 92.8189 bits (229), Expect = 2.451e-18
Identity = 62/190 (32.63%), Postives = 98/190 (51.58%), Query Frame = 1

Query:   70 NVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDG-DGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQ 636
            ++YV  L  S TE  L + F   G +AS  V RD    +S  + +VN+ +S+D  +A+E LN      K   +  +Q+                  A  K    N++IKNLD +ID++ L   F+ FGNI SCKV +D  G S+G GFV + T E A+ A+  +NG ++  K ++V     K++R ++ +
Sbjct:   49 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEELNYTVIKGKPCRIMWSQRDP----------------ALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKFE 222

[Close]

BLAST of FC918123 vs. ExPASy Swiss-Prot
Match: PABPX_ARATH (Probable polyadenylate-binding protein At2g36660 OS=Arabidopsis thaliana GN=At2g36660 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.779e-46
Identity = 98/231 (42.42%), Postives = 149/231 (64.50%), Query Frame = 1

Query:    4 VYVGHFLRRLERDTEISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQMRPVAMASTVAPRMP 696
            +YVG F+++ +R     + K+TN+Y+KNL    +E+ L++ F E+G I S  + +D +   + + FVNF+N +DA RA E +NG KF  K  YVG+AQKK+ERE  L+ QF++  +E     + +N+Y+KN++ ++ +E+L+  FS  G ITS K+M D +G S+G GFV FSTPEEA  A+   +G+M   KPLYVA+A +KEDR+ +LQ QF        +S+ A   P
Sbjct:  182 IYVGKFMKKTDRVKP--EEKYTNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENRLCRGYAFVNFDNPEDARRAAETVNGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLYVAIAQKKEDRKMQLQVQFGNRVEARKSSSSASVNP 410

HSP 2 Score: 125.946 bits (315), Expect = 2.613e-28
Identity = 77/194 (39.69%), Postives = 104/194 (53.61%), Query Frame = 1

Query:   70 NVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQ 651
            NV+VKNL  S T   LQ  F ++G I S  V    DGKS+ +GFV FE  D A  A++ LN     DKE YVGK  KK++R             +  +K+  TNLY+KNLD  + ++ L+  F+ FG I S  + +D   + RG  FV F  PE+A  A   +NG    SK LYV  A +K +R   L+ QF +
Sbjct:  113 NVFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYVGKFMKKTDR------------VKPEEKY--TNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENRLCRGYAFVNFDNPEDARRAAETVNGTKFGSKCLYVGRAQKKAEREQLLREQFKE 292

HSP 3 Score: 88.9669 bits (219), Expect = 3.539e-17
Identity = 58/185 (31.35%), Postives = 91/185 (49.19%), Query Frame = 1

Query:   70 NVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGD-GKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDR 621
            ++YV +L  S TE  L  +F E+ ++ S  + +D   G+S C+G+ NF +  DA  A+E  N    + K                ++  +     +A     G N+++KNL +S+ +  L+ +F  FGNI SCKV     G SRG GFV F   + A  A+  +N  +V  K +YV    +K DR
Sbjct:   25 SLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKKNNSLLNGK---------------MIRVMWSVRAPDARRNGVG-NVFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYVGKFMKKTDR 193

[Close]

BLAST of FC918123 vs. ExPASy Swiss-Prot
Match: PABP5_PONPY (Polyadenylate-binding protein 5 OS=Pongo pygmaeus GN=PABPC5 PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.515e-41
Identity = 98/202 (48.51%), Postives = 130/202 (64.36%), Query Frame = 1

Query:    4 VYVGHFLRRLERDTEI---SKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVAL 600
            VYVG F    ER  E+    ++ FTNV+VKN+     +E L++ F EYG   S  V+RD  GKSK FGFV +E  + A +AV  L+GK  D K  YVG+AQKK ER  EL+ +FE+   +   +  G  +YIKNLD++I+DEKLK  FS FG+I+  KVM +  G  +G G V FS+ EEA+ A+ EMNGR+V SKPL+V L
Sbjct:  175 VYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMMEV-GQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTL 375

HSP 2 Score: 130.183 bits (326), Expect = 1.385e-29
Identity = 78/221 (35.29%), Postives = 126/221 (57.01%), Query Frame = 1

Query:   40 DTEISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQMRPVAMASTVAPRMPMY 702
            D  + KS   N+++KNL  S     L   F  +G I S  V+ D +G SK + +V+F++   A RA+  +NG + ++++ YVG+ +   ER  E++ +         D+   TN+++KN+ D IDDEKLK LF  +G   S KV+RD  G S+G GFV + T E A  A+L+++G+ +  K LYV  A +K +R A L+ +F ++R      +  P +P+Y
Sbjct:   97 DDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR---------DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLR--LKEKSRPPGVPIY 305

HSP 3 Score: 78.1814 bits (191), Expect = 6.248e-14
Identity = 60/191 (31.41%), Postives = 93/191 (48.69%), Query Frame = 1

Query:   73 VYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKC-FGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQ 642
            +YV +L    TE+ L K F   G +    + RD   +S   +G+VNF    DA  A+  +N    + K + +  +Q                  +   K    N++IKNLD SID+  L +LFS FGNI SCKV+ D  G S+G  +V F +   A+ A+  MNG  + ++ +YV      E+R A ++ +
Sbjct:   20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQP----------------DDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR 193

[Close]

BLAST of FC918123 vs. ExPASy Swiss-Prot
Match: PABP5_PANTR (Polyadenylate-binding protein 5 OS=Pan troglodytes GN=PABPC5 PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.515e-41
Identity = 98/202 (48.51%), Postives = 130/202 (64.36%), Query Frame = 1

Query:    4 VYVGHFLRRLERDTEI---SKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVAL 600
            VYVG F    ER  E+    ++ FTNV+VKN+     +E L++ F EYG   S  V+RD  GKSK FGFV +E  + A +AV  L+GK  D K  YVG+AQKK ER  EL+ +FE+   +   +  G  +YIKNLD++I+DEKLK  FS FG+I+  KVM +  G  +G G V FS+ EEA+ A+ EMNGR+V SKPL+V L
Sbjct:  175 VYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMMEV-GQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTL 375

HSP 2 Score: 130.183 bits (326), Expect = 1.385e-29
Identity = 78/221 (35.29%), Postives = 126/221 (57.01%), Query Frame = 1

Query:   40 DTEISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQMRPVAMASTVAPRMPMY 702
            D  + KS   N+++KNL  S     L   F  +G I S  V+ D +G SK + +V+F++   A RA+  +NG + ++++ YVG+ +   ER  E++ +         D+   TN+++KN+ D IDDEKLK LF  +G   S KV+RD  G S+G GFV + T E A  A+L+++G+ +  K LYV  A +K +R A L+ +F ++R      +  P +P+Y
Sbjct:   97 DDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR---------DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLR--LKEKSRPPGVPIY 305

HSP 3 Score: 78.1814 bits (191), Expect = 6.248e-14
Identity = 60/191 (31.41%), Postives = 93/191 (48.69%), Query Frame = 1

Query:   73 VYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKC-FGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQ 642
            +YV +L    TE+ L K F   G +    + RD   +S   +G+VNF    DA  A+  +N    + K + +  +Q                  +   K    N++IKNLD SID+  L +LFS FGNI SCKV+ D  G S+G  +V F +   A+ A+  MNG  + ++ +YV      E+R A ++ +
Sbjct:   20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQP----------------DDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR 193

[Close]

BLAST of FC918123 vs. ExPASy Swiss-Prot
Match: PABP5_MACMU (Polyadenylate-binding protein 5 OS=Macaca mulatta GN=PABPC5 PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.515e-41
Identity = 98/202 (48.51%), Postives = 130/202 (64.36%), Query Frame = 1

Query:    4 VYVGHFLRRLERDTEI---SKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVAL 600
            VYVG F    ER  E+    ++ FTNV+VKN+     +E L++ F EYG   S  V+RD  GKSK FGFV +E  + A +AV  L+GK  D K  YVG+AQKK ER  EL+ +FE+   +   +  G  +YIKNLD++I+DEKLK  FS FG+I+  KVM +  G  +G G V FS+ EEA+ A+ EMNGR+V SKPL+V L
Sbjct:  175 VYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMMEV-GQGKGFGVVCFSSFEEATKAVDEMNGRVVGSKPLHVTL 375

HSP 2 Score: 130.183 bits (326), Expect = 1.385e-29
Identity = 78/221 (35.29%), Postives = 126/221 (57.01%), Query Frame = 1

Query:   40 DTEISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQMRPVAMASTVAPRMPMY 702
            D  + KS   N+++KNL  S     L   F  +G I S  V+ D +G SK + +V+F++   A RA+  +NG + ++++ YVG+ +   ER  E++ +         D+   TN+++KN+ D IDDEKLK LF  +G   S KV+RD  G S+G GFV + T E A  A+L+++G+ +  K LYV  A +K +R A L+ +F ++R      +  P +P+Y
Sbjct:   97 DDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR---------DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLR--LKEKSRPPGVPIY 305

HSP 3 Score: 78.1814 bits (191), Expect = 6.248e-14
Identity = 60/191 (31.41%), Postives = 93/191 (48.69%), Query Frame = 1

Query:   73 VYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKC-FGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQ 642
            +YV +L    TE+ L K F   G +    + RD   +S   +G+VNF    DA  A+  +N    + K + +  +Q                  +   K    N++IKNLD SID+  L +LFS FGNI SCKV+ D  G S+G  +V F +   A+ A+  MNG  + ++ +YV      E+R A ++ +
Sbjct:   20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQP----------------DDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR 193

[Close]

BLAST of FC918123 vs. ExPASy Swiss-Prot
Match: PABP5_HYLLA (Polyadenylate-binding protein 5 OS=Hylobates lar GN=PABPC5 PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.515e-41
Identity = 98/202 (48.51%), Postives = 130/202 (64.36%), Query Frame = 1

Query:    4 VYVGHFLRRLERDTEI---SKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVAL 600
            VYVG F    ER  E+    ++ FTNV+VKN+     +E L++ F EYG   S  V+RD  GKSK FGFV +E  + A +AV  L+GK  D K  YVG+AQKK ER  EL+ +FE+   +   +  G  +YIKNLD++I+DEKLK  FS FG+I+  KVM +  G  +G G V FS+ EEA+ A+ EMNGR+V SKPL+V L
Sbjct:  175 VYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMMEV-GQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTL 375

HSP 2 Score: 130.183 bits (326), Expect = 1.385e-29
Identity = 78/221 (35.29%), Postives = 126/221 (57.01%), Query Frame = 1

Query:   40 DTEISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQMRPVAMASTVAPRMPMY 702
            D  + KS   N+++KNL  S     L   F  +G I S  V+ D +G SK + +V+F++   A RA+  +NG + ++++ YVG+ +   ER  E++ +         D+   TN+++KN+ D IDDEKLK LF  +G   S KV+RD  G S+G GFV + T E A  A+L+++G+ +  K LYV  A +K +R A L+ +F ++R      +  P +P+Y
Sbjct:   97 DDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR---------DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLR--LKEKSRPPGVPIY 305

HSP 3 Score: 78.1814 bits (191), Expect = 6.248e-14
Identity = 60/191 (31.41%), Postives = 93/191 (48.69%), Query Frame = 1

Query:   73 VYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKC-FGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQ 642
            +YV +L    TE+ L K F   G +    + RD   +S   +G+VNF    DA  A+  +N    + K + +  +Q                  +   K    N++IKNLD SID+  L +LFS FGNI SCKV+ D  G S+G  +V F +   A+ A+  MNG  + ++ +YV      E+R A ++ +
Sbjct:   20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQP----------------DDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR 193

[Close]

BLAST of FC918123 vs. ExPASy Swiss-Prot
Match: PABP5_HUMAN (Polyadenylate-binding protein 5 OS=Homo sapiens GN=PABPC5 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.515e-41
Identity = 98/202 (48.51%), Postives = 130/202 (64.36%), Query Frame = 1

Query:    4 VYVGHFLRRLERDTEI---SKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVAL 600
            VYVG F    ER  E+    ++ FTNV+VKN+     +E L++ F EYG   S  V+RD  GKSK FGFV +E  + A +AV  L+GK  D K  YVG+AQKK ER  EL+ +FE+   +   +  G  +YIKNLD++I+DEKLK  FS FG+I+  KVM +  G  +G G V FS+ EEA+ A+ EMNGR+V SKPL+V L
Sbjct:  175 VYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMMEV-GQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTL 375

HSP 2 Score: 130.183 bits (326), Expect = 1.385e-29
Identity = 78/221 (35.29%), Postives = 126/221 (57.01%), Query Frame = 1

Query:   40 DTEISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQMRPVAMASTVAPRMPMY 702
            D  + KS   N+++KNL  S     L   F  +G I S  V+ D +G SK + +V+F++   A RA+  +NG + ++++ YVG+ +   ER  E++ +         D+   TN+++KN+ D IDDEKLK LF  +G   S KV+RD  G S+G GFV + T E A  A+L+++G+ +  K LYV  A +K +R A L+ +F ++R      +  P +P+Y
Sbjct:   97 DDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR---------DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLR--LKEKSRPPGVPIY 305

HSP 3 Score: 78.1814 bits (191), Expect = 6.248e-14
Identity = 60/191 (31.41%), Postives = 93/191 (48.69%), Query Frame = 1

Query:   73 VYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKC-FGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQ 642
            +YV +L    TE+ L K F   G +    + RD   +S   +G+VNF    DA  A+  +N    + K + +  +Q                  +   K    N++IKNLD SID+  L +LFS FGNI SCKV+ D  G S+G  +V F +   A+ A+  MNG  + ++ +YV      E+R A ++ +
Sbjct:   20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQP----------------DDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR 193

[Close]

BLAST of FC918123 vs. ExPASy Swiss-Prot
Match: PABP5_GORGO (Polyadenylate-binding protein 5 OS=Gorilla gorilla gorilla GN=PABPC5 PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.515e-41
Identity = 98/202 (48.51%), Postives = 130/202 (64.36%), Query Frame = 1

Query:    4 VYVGHFLRRLERDTEI---SKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVAL 600
            VYVG F    ER  E+    ++ FTNV+VKN+     +E L++ F EYG   S  V+RD  GKSK FGFV +E  + A +AV  L+GK  D K  YVG+AQKK ER  EL+ +FE+   +   +  G  +YIKNLD++I+DEKLK  FS FG+I+  KVM +  G  +G G V FS+ EEA+ A+ EMNGR+V SKPL+V L
Sbjct:  175 VYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMMEV-GQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTL 375

HSP 2 Score: 130.183 bits (326), Expect = 1.385e-29
Identity = 78/221 (35.29%), Postives = 126/221 (57.01%), Query Frame = 1

Query:   40 DTEISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQMRPVAMASTVAPRMPMY 702
            D  + KS   N+++KNL  S     L   F  +G I S  V+ D +G SK + +V+F++   A RA+  +NG + ++++ YVG+ +   ER  E++ +         D+   TN+++KN+ D IDDEKLK LF  +G   S KV+RD  G S+G GFV + T E A  A+L+++G+ +  K LYV  A +K +R A L+ +F ++R      +  P +P+Y
Sbjct:   97 DDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR---------DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLR--LKEKSRPPGVPIY 305

HSP 3 Score: 78.1814 bits (191), Expect = 6.248e-14
Identity = 60/191 (31.41%), Postives = 93/191 (48.69%), Query Frame = 1

Query:   73 VYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKC-FGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQ 642
            +YV +L    TE+ L K F   G +    + RD   +S   +G+VNF    DA  A+  +N    + K + +  +Q                  +   K    N++IKNLD SID+  L +LFS FGNI SCKV+ D  G S+G  +V F +   A+ A+  MNG  + ++ +YV      E+R A ++ +
Sbjct:   20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQP----------------DDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR 193

[Close]

BLAST of FC918123 vs. ExPASy Swiss-Prot
Match: PABP_ASPOR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus oryzae GN=pab1 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.886e-40
Identity = 80/161 (49.69%), Postives = 111/161 (68.94%), Query Frame = 1

Query:    4 VYVGHFLRRLERDTEIS--KSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRD 480
            V+VGH + + +R ++    K+ FTNVY+KN+    TEE+ ++ F ++G I SA + RD +GKS+ FGFVNF   + A  AV+ +N K+   ++ YVG+AQKK ERE EL+ Q+E    E A K+QG NLY+KNL D +DDEKL+ LF P+G ITS KVMRD
Sbjct:  207 VFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFGPYGTITSAKVMRD 367

HSP 2 Score: 134.42 bits (337), Expect = 7.346e-31
Identity = 75/208 (36.06%), Postives = 116/208 (55.77%), Query Frame = 1

Query:   34 ERDTEISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQMR 657
            +RD  + K+   NV++KNL  +   + L  +F  +G I S  V +D  G SK +GFV++E ++ A  A++ +NG   +DK+ +VG    K +R+ + +            K   TN+YIKN+D  + +E+ + LF  FG ITS  + RD  G SRG GFV FST E A  A+ EMN + + ++ LYV  A +K +R   L+ Q+   R
Sbjct:  126 QRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEM----------KANFTNVYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHEREEELRKQYEAAR 323

HSP 3 Score: 107.842 bits (268), Expect = 7.363e-23
Identity = 94/292 (32.19%), Postives = 133/292 (45.55%), Query Frame = 1

Query:    4 VYVGHFLRRLERDTEISK----------SKF--TNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQMRPV-AMASTVAPRMPMYXXXXXXIEQQIFYGQGPPAMIPPQ-------PAFGYQQQLVPGMRP 819
            +YVG   ++ ER+ E+ K          SK+   N+YVKNL+    +E L++ FG YGTI SA VMRD           N E +                DKE    +A K++E+E     + E+  ++ AD            D+  +D++ K            K  +   G S+G GFV FS+P+EAS A+ EMN RMV  KPLYVALA RK+ RR++L+A       +    +  A  MP        ++  +FYG G    IP Q       P  G     +PG RP
Sbjct:  300 LYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFGPYGTITSAKVMRD----------TNIERTQTPE-----------SDKEKENKEATKENEKESSEAEKAEKTEEKPADSG----------DEKKEDKESK------------KADKKGLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEASIQARNTIRQQQAAAAAGMPQ-----PYMQPAVFYGPGQQGFIPGQRGGIAFPPQPGMVMAGIPGGRP 543

HSP 4 Score: 97.0561 bits (240), Expect = 1.300e-19
Identity = 67/205 (32.68%), Postives = 102/205 (49.76%), Query Frame = 1

Query:   52 SKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDG-DGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQMRPV 663
            S+    ++YV  L  S TE  L + F   G +AS  V RD    +S  + +VN+ N+ D  RA+E LN      K   +  +Q+                  A  K    N++IKNLD +ID++ L   F+ FGNI SCKV +D  G S+G GFV + T E A+ A+  +NG ++  K ++V     K+DR+++ +   A    V
Sbjct:   44 SQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDP----------------ALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNV 232

The following BLAST results are available for this feature:

BLAST of FC918123 vs. ExPASy Swiss-Prot

BLAST of FC918123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143


Match Name	E-value	Identity	Description
PABP_YARLI	1.247e-46	41.07	Polyadenylate-binding protein, cytoplasmic and nuc...	[more]
PABP_PHANO	1.629e-46	41.20	Polyadenylate-binding protein, cytoplasmic and nuc...	[more]
PABPX_ARATH	2.779e-46	42.42	Probable polyadenylate-binding protein At2g36660 O...	[more]
PABP5_PONPY	3.515e-41	48.51	Polyadenylate-binding protein 5 OS=Pongo pygmaeus ...	[more]
PABP5_PANTR	3.515e-41	48.51	Polyadenylate-binding protein 5 OS=Pan troglodytes...	[more]
PABP5_MACMU	3.515e-41	48.51	Polyadenylate-binding protein 5 OS=Macaca mulatta ...	[more]
PABP5_HYLLA	3.515e-41	48.51	Polyadenylate-binding protein 5 OS=Hylobates lar G...	[more]
PABP5_HUMAN	3.515e-41	48.51	Polyadenylate-binding protein 5 OS=Homo sapiens GN...	[more]
PABP5_GORGO	3.515e-41	48.51	Polyadenylate-binding protein 5 OS=Gorilla gorilla...	[more]
PABP_ASPOR	3.886e-40	49.69	Polyadenylate-binding protein, cytoplasmic and nuc...	[more]

Pages

Properties


Property Name	Value
Genbank description	IC0AAA83DF02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA83DF02, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC918123 ID=FC918123; Name=FC918123; organism=Citrus clementina; type=EST; length=821bp
CCAGTTTATGTTGGACATTTCCTCCGCAGGCTGGAGAGAGATACTGAGAT
CAGCAAGAGCAAATTCACCAATGTTTATGTGAAGAACCTCTCATAGTCGA
CAACTGAAGAAGATCTGCAAAAAAGTTTTGGTGAATATGGCACAATCGCA
AGTGCTGTTGTGATGAGGGATGGGGATGGCAAATCAAAATGCTTTGGATT
TGTCAACTTTGAGAATTCGGATGATGCTGCTAGAGCAGTTGAGGCTCTTA
ATGGAAAGAAATTTGACGATAAGGAGTGGTATGTTGGGAAAGCCCAAAAG
AAATCTGAAAGAGAACTTGAATTGAAACATCAATTTGAGCAAAATATGAA
GGAAGCAGCTGACAAATTTCAGGGAACAAACTTATATATTAAAAATTTAG
ATGATAGCATAGATGATGAAAAACTTAAGCACCTGTTCTCTCCATTTGGT
AACATCACATCATGCAAGGTAATGCGAGACCCACGTGGAATTAGTAGAGG
ATCCGGGTTTGTTGCGTTCTCAACTCCTGAAGAGGCATCTATAGCTCTTC
TGGAGATGAATGGCAGGATGGTTGTCTCCAAACCGCTTTATGTTGCTCTT
GCCTAACGCAAGGAAGATAGAAGAGCTAGGTTGCAGGCTCAATTTGCACA
AATGAGGCCAGTTGCAATGGCTTCTACAGTCGCTCCTCGAATGCCGATGT
ACCCTCCTGGTGGTCCAGGTATTGAGCAACAAATATTCTATGGTCAAGGC
CCGCCTGCTATGATTCCTCCTCAGCCTGCATTTGGTTATCAGCAGCAGCT
TGTTCCTGGTATGAGGCCAGG