FC918203

Overview
NameFC918203
Unique NameFC918203
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length879
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC918203 vs. ExPASy Swiss-Prot
Match: DNJB6_XENTR (DnaJ homolog subfamily B member 6 OS=Xenopus tropicalis GN=dnajb6 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.004e-20
Identity = 44/87 (50.57%), Postives = 65/87 (74.71%), Query Frame = 1
Query:  220 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGTPSYHHPHD 480
            V+YY++L V R A+ +D+KK+Y++LA+KWHPDKNP    +AE +FK ++EAY+VLSD +KR IYD YG EGL     G+  + +P++
Sbjct:    2 VEYYDVLGVQRNASPEDIKKAYRKLALKWHPDKNPDNKDEAERRFKEVAEAYEVLSDSKKRDIYDKYGKEGLTGGGGGS-HFDNPYE 87          
BLAST of FC918203 vs. ExPASy Swiss-Prot
Match: DJB11_BOVIN (DnaJ homolog subfamily B member 11 OS=Bos taurus GN=DNAJB11 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.311e-20
Identity = 77/257 (29.96%), Postives = 117/257 (45.53%), Query Frame = 1
Query:  217 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLK---ASDFGTPSYHHPHDIKPCATRXXXXXXHRXXXXXXXXXXXXIETQLLCTLEELYKG----------------------ARKKMKISRVLPDHFG-------------KPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPAADLIFVVEEKPHAVFQRDGNDLVVNHKISLLGALTG 873
            G D+Y IL V R A+  D+KK+Y++LA++ HPD+NP  + +A+ KF+ +  AY+VLSD  KR+ YD YG EGLK    S  G    H   D                           I   L  TLEE+Y G                       R++M+ +++ P  F              K +  +  L+++I+PG + G +  F  +G         DL F ++   H++F+R G+DL  N  ISL+ +L G
Sbjct:   23 GRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNP-DDPRAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHGDIFSHFFGDF------GFMFGGTPRQQDRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTTQLGPGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHSIFERRGDDLYTNVTISLVESLVG 272          
BLAST of FC918203 vs. ExPASy Swiss-Prot
Match: DNJB6_CHICK (DnaJ homolog subfamily B member 6 OS=Gallus gallus GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.237e-20
Identity = 43/87 (49.43%), Postives = 63/87 (72.41%), Query Frame = 1
Query:  220 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGTPSYHHPHD 480
            VDYY +L V + A+ +D+KK+Y++LA+KWHPDKNP   ++AE +FK ++EAY+VLSD +KR IYD +G EGL     G   + +P +
Sbjct:    2 VDYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPENKEEAEQQFKQVAEAYEVLSDAKKRDIYDRFGKEGLINGGGGGSHHDNPFE 88          
BLAST of FC918203 vs. ExPASy Swiss-Prot
Match: DJB11_CANFA (DnaJ homolog subfamily B member 11 OS=Canis familiaris GN=DNAJB11 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.237e-20
Identity = 77/257 (29.96%), Postives = 116/257 (45.14%), Query Frame = 1
Query:  217 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLK---ASDFGTPSYHHPHDIKPCATRXXXXXXHRXXXXXXXXXXXXIETQLLCTLEELYKG----------------------ARKKMKISRVLPDHFG-------------KPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPAADLIFVVEEKPHAVFQRDGNDLVVNHKISLLGALTG 873
            G D+Y IL V R A+  D+KK+Y++LA++ HPD+NP  + +A+ KF+ +  AY+VLSD  KR+ YD YG EGLK    S  G    H   D                           I   L  TLEE+Y G                       R++M+ +++ P  F              K +  +  L+++I+PG + G +  F  +G         DL F ++   H +F+R G+DL  N  ISL+ +L G
Sbjct:   23 GRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNP-DDPRAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHGDIFSHFFGDF------GFMFGGTPRQQDRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTTQLGPGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDLYTNVTISLVESLVG 272          
BLAST of FC918203 vs. ExPASy Swiss-Prot
Match: DNJB8_HUMAN (DnaJ homolog subfamily B member 8 OS=Homo sapiens GN=DNAJB8 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.921e-20
Identity = 42/86 (48.84%), Postives = 61/86 (70.93%), Query Frame = 1
Query:  223 DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGTPSYHHPHD 480
            +YY +L V   A+ +D+KK+Y++LA++WHPDKNP   ++AE KFKL+SEAY+VLSD +KR +YD  G +  +A    +  YH P D
Sbjct:    3 NYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRAGGGASTPYHSPFD 88          
BLAST of FC918203 vs. ExPASy Swiss-Prot
Match: DNJB4_PONAB (DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.921e-20
Identity = 46/81 (56.79%), Postives = 64/81 (79.01%), Query Frame = 1
Query:  214 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGT 456
            MG DYY IL + +GA+++D+KK+Y++ A+K+HPDKN +   QAE KFK ++EAY+VLSDP+KR+IYD +G EGLK    GT
Sbjct:    1 MGKDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSP--QAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGGT 79          

HSP 2 Score: 94.7449 bits (234), Expect = 7.195e-19
Identity = 47/104 (45.19%), Postives = 71/104 (68.27%), Query Frame = 1
Query:  571 QLLCTLEELYKGARKKMKISRVLPDHFGKPITVQE-ILKIDIKPGWKKGTKITFPEKGNQEPGLPAADLIFVVEEKPHAVFQRDGNDLVVNHKISLLGALTGLS 879
            +L  +LEE+Y G  K+MKISR   +  G+    ++ IL I+IK GWK+GTKITFP +G++ P    AD++F++++K H  F+RDG++++   KISL  AL G S
Sbjct:  163 ELRVSLEEIYSGCTKRMKISRKRLNADGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCS 266          
BLAST of FC918203 vs. ExPASy Swiss-Prot
Match: DNJB4_HUMAN (DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.921e-20
Identity = 46/81 (56.79%), Postives = 64/81 (79.01%), Query Frame = 1
Query:  214 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGT 456
            MG DYY IL + +GA+++D+KK+Y++ A+K+HPDKN +   QAE KFK ++EAY+VLSDP+KR+IYD +G EGLK    GT
Sbjct:    1 MGKDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSP--QAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGGT 79          

HSP 2 Score: 94.7449 bits (234), Expect = 7.195e-19
Identity = 47/104 (45.19%), Postives = 71/104 (68.27%), Query Frame = 1
Query:  571 QLLCTLEELYKGARKKMKISRVLPDHFGKPITVQE-ILKIDIKPGWKKGTKITFPEKGNQEPGLPAADLIFVVEEKPHAVFQRDGNDLVVNHKISLLGALTGLS 879
            +L  +LEE+Y G  K+MKISR   +  G+    ++ IL I+IK GWK+GTKITFP +G++ P    AD++F++++K H  F+RDG++++   KISL  AL G S
Sbjct:  163 ELRVSLEEIYSGCTKRMKISRKRLNADGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCS 266          
BLAST of FC918203 vs. ExPASy Swiss-Prot
Match: DNAJ2_AQUAE (Chaperone protein dnaJ 2 OS=Aquifex aeolicus GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.921e-20
Identity = 82/286 (28.67%), Postives = 119/286 (41.61%), Query Frame = 1
Query:  223 DYYNILKVSRGATEDDLKKSYKRLAMKWHPD--KNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGTPSYHHPHDIKP------------CATRXXXXXXHRXXXXXXXXXXXXIETQLLCTLEELYKGARKKMKI------------------SRVLPDHFGKPITVQ------------------------------------EILKIDIKPGWKKGTKITFPEKGNQ-EPGLPAADLIFVVEEKPHAVFQRDGNDLVVNHKISLLGALTG 873
            DYY IL V R A+++++KK+Y+RL  K+HPD  K P    + E KFK I+EAY VLSDP KR++YD+YG    + +  G        +I P              +        R            I   +  TLEE +KG    +++                  SR  P   G+  TVQ                                    E +K+ I PG + G+K+    KG+    G P  DL  +V+ KPH +F+R G+DL V+  I+   A+ G
Sbjct:    8 DYYEILGVPRNASQEEIKKAYRRLVRKYHPDICKKP----ECEEKFKEINEAYQVLSDPEKRKLYDMYGHAAFEGA--GAQQRVETTEIPPIEEILREFFDFDIGSIFERATGRRRARRRRSVKGEDIVVPVEITLEEAFKGTTVPIEVEREVPCSACGGTGYDESKSRTCPTCGGRGETVQGNWFFQVRQTCPTCGGEGVIYENCHACTGRGYGLVKETIKVKIPPGVRDGSKLVVEGKGHAGRYGGPPGDLYIIVKVKPHKIFERKGDDLYVDVNITYPEAVLG 287          
BLAST of FC918203 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCGA (Chaperone protein dnaJ OS=Mycoplasma gallisepticum GN=dnaJ PE=3 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 4.983e-20
Identity = 47/87 (54.02%), Postives = 66/87 (75.86%), Query Frame = 1
Query:  223 DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGTPSYHHPHDI 483
            DYY IL+VSR AT+ D+KK++++LAMK+HPD+N   +  AE KFK ++EAY+VLSD  KR++YD YG EGL AS F    + +P+D+
Sbjct:    6 DYYEILEVSRSATQQDIKKAFRKLAMKYHPDRN--KDSDAEEKFKEVNEAYEVLSDEEKRKLYDTYGHEGLNASGFHQGGF-NPYDV 89          
BLAST of FC918203 vs. ExPASy Swiss-Prot
Match: DNJB1_MOUSE (DnaJ homolog subfamily B member 1 OS=Mus musculus GN=Dnajb1 PE=2 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 6.508e-20
Identity = 48/83 (57.83%), Postives = 64/83 (77.11%), Query Frame = 1
Query:  214 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGTPS 462
            MG DYY  L ++RGA++D++K++Y+R A+++HPDKN      AE KFK I+EAYDVLSDPRKR+I+D YG EGLK    G+PS
Sbjct:    1 MGKDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPG--AEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG---GSPS 78          

HSP 2 Score: 96.2857 bits (238), Expect = 2.473e-19
Identity = 52/103 (50.49%), Postives = 74/103 (71.84%), Query Frame = 1
Query:  574 LLCTLEELYKGARKKMKIS--RVLPDHFGKPITVQE-ILKIDIKPGWKKGTKITFPEKGNQEPGLPAADLIFVVEEKPHAVFQRDGNDLVVNHKISLLGALTG 873
            L  +LEE+Y G  KKMKIS  R+ PD  GK I  ++ IL I++K GWK+GTKITFP++G+Q      AD++FV+++KPH +F+RDG+D++   +ISL  AL G
Sbjct:  168 LRVSLEEIYSGCTKKMKISHKRLNPD--GKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCG 268          
The following BLAST results are available for this feature:
BLAST of FC918203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJB6_XENTR1.004e-2050.57DnaJ homolog subfamily B member 6 OS=Xenopus tropi... [more]
DJB11_BOVIN1.311e-2029.96DnaJ homolog subfamily B member 11 OS=Bos taurus G... [more]
DNJB6_CHICK2.237e-2049.43DnaJ homolog subfamily B member 6 OS=Gallus gallus... [more]
DJB11_CANFA2.237e-2029.96DnaJ homolog subfamily B member 11 OS=Canis famili... [more]
DNJB8_HUMAN2.921e-2048.84DnaJ homolog subfamily B member 8 OS=Homo sapiens ... [more]
DNJB4_PONAB2.921e-2056.79DnaJ homolog subfamily B member 4 OS=Pongo abelii ... [more]
DNJB4_HUMAN2.921e-2056.79DnaJ homolog subfamily B member 4 OS=Homo sapiens ... [more]
DNAJ2_AQUAE2.921e-2028.67Chaperone protein dnaJ 2 OS=Aquifex aeolicus GN=dn... [more]
DNAJ_MYCGA4.983e-2054.02Chaperone protein dnaJ OS=Mycoplasma gallisepticum... [more]
DNJB1_MOUSE6.508e-2057.83DnaJ homolog subfamily B member 1 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA17AH02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA17AH02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918203 ID=FC918203; Name=FC918203; organism=Citrus clementina; type=EST; length=879bp
CTGCGCTCTACATATTCATTCATTCATCGTAACGAATAACGATTAACTAA
CCTCCCTCTCCAGTCTCCACTCCTCCTACAATACAATAATAATACTTTGA
TGGTCCAGTTCTTATAACAAACACCTTCCTTATTATTACTCGGTCTCTGT
CTCTCGTTTGTACATCTCATGATTGAATTCTGATTCACACCGACACCGAC
ACGGTCGAATAGAATGGGAGTGGATTATTATAACATACTGAAAGTGAGCC
GCGGCGCTACTGAAGATGACTTGAAGAAGTCTTACAAAAGACTCGCCATG
AAGTGGCATCCCGACAAGAATCCCGCCACCAATCAACAGGCCGAAGCCAA
GTTTAAACTCATCTCCGAGGCCTATGACGTCTTGAGTGATCCCCGTAAGC
GCCAGATCTATGATCTCTACGGCCCCGAGGGTTTGAAGGCCTCCGACTTC
GGCACGCCCTCCTATCATCATCCCCACGACATCAAGCCCTGTGCTACTCG
CAACAATAATAACAACAATCATAGAGCTGGGGGTGCTGGGCCCAAGCCCA
CCCCGACGCCCATTGAGACCCAATTGCTGTGTACCTTGGAGGAGCTTTAC
AAAGGTGCTAGAAAAAAGATGAAGATTTCTCGCGTTCTTCCTGATCATTT
TGGCAAGCCAATCACTGTCCAGGAGATCCTGAAAATTGACATTAAACCTG
GCTGGAAGAAAGGAACCAAGATCACTTTCCCCGAGAAAGGAAACCAGGAA
CCTGGTCTACCTGCGGCTGATCTTATCTTTGTGGTGGAAGAGAAACCTCA
TGCTGTTTTCCAGAGGGACGGGAACGATCTGGTGGTCAATCACAAAATCT
CACTGCTGGGAGCCCTCACAGGGCTGTCT
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