FC918216

Overview
NameFC918216
Unique NameFC918216
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length831
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC918216 vs. ExPASy Swiss-Prot
Match: YEH1_SCHPO (Oxysterol-binding protein homolog C23H4.01c OS=Schizosaccharomyces pombe GN=SPAC23H4.01c PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.730e-19
Identity = 59/174 (33.91%), Postives = 103/174 (59.20%), Query Frame = 3
Query:  303 MMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIY----FAYRRAWKPFNPVLGETFEMVNHG-GVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWID 809
            +++K IG D+ S +  PV  +EP ++LQR AE +EYS++LD A+EC+D  +++ Y +++A+S +       R   K F+P+LGETFE+V       F+AE+V H P + A HAE+ ++I++ + K   KF G S+++  +G   + L   G     + P   + N+  G  +++
Sbjct:  576 ILRKNIGKDISS-IPAPVVSNEPCNLLQRCAEDLEYSNMLDKANECDDD-IKIFYVAAFAVSNFSNMRHKERSVRKVFSPLLGETFELVREDRNYRFLAEKVCHRPLIIACHAESRNWIWNHSPKPIQKFWGKSVELNTLGPVTIKL-ACGTEFSFMKPACFLKNVAIGEKYVE 746          
BLAST of FC918216 vs. ExPASy Swiss-Prot
Match: OSH3_YEAST (Oxysterol-binding protein homolog 3 OS=Saccharomyces cerevisiae GN=OSH3 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.033e-19
Identity = 61/173 (35.26%), Postives = 95/173 (54.91%), Query Frame = 3
Query:  306 MQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRRAW----KPFNPVLGETFEMVNHG-GVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWID 809
            ++K +G D+ S + +PV  +EP S+LQ ++E  EY+ LL  A +  DP   + + S++A+S    YR       KPFNP+L ETFE++    G   I+E+VSH PP+ A  AE+  +    T     KF G SI++   G  R+  K  G + +   P T + NLI G  +++
Sbjct:  647 LRKNVGKDLSS-IAMPVTSNEPISILQLISETFEYAPLLTKATQRPDP---ITFVSAFAISFLSIYRDKTRTLRKPFNPLLAETFELIREDMGFRLISEKVSHRPPVFAFFAEHLDWECSYTVTPSQKFWGKSIELNNEGILRLKFKTTGELFEWTQPTTILKNLIAGERYME 815          
BLAST of FC918216 vs. ExPASy Swiss-Prot
Match: OSBL9_PONAB (Oxysterol-binding protein-related protein 9 OS=Pongo abelii GN=OSBPL9 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.262e-18
Identity = 64/188 (34.04%), Postives = 98/188 (52.13%), Query Frame = 3
Query:  231 STEDAEDEARRGRWKQEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRR---AWKPFNPVLGETF--------------EMVNHG--------GVTFIAEQVSHHPPMSAGHAE--NEHFIYDVTSKLRTKFLGNSIDVYPVGR 713
            S +D +D+A  G  ++ +      + Q  +G D+  +V LP FI E  S+L+  A+   +  L     + +DP  R+V    W LS + A R+   A KP+NP+LGE F              E+V+ G         VTF+AEQVSHHPP+SA +AE  N+   ++     ++KFLG SI V+ +G+
Sbjct:  355 SHDDRDDDAEAGSVEEHKSVIMHLLSQVRLGMDLTKVV-LPTFILERRSLLEMYADFFAHPDLFVSISDQKDPKDRMVQVVKWYLSAFHAGRKGSVAKKPYNPILGEIFQCYWTLPNDTEENTELVSEGPVPWVSKNSVTFVAEQVSHHPPISAFYAECFNKKIQFNAHIWTKSKFLGMSIGVHNIGQ 541          
BLAST of FC918216 vs. ExPASy Swiss-Prot
Match: OSBL9_HUMAN (Oxysterol-binding protein-related protein 9 OS=Homo sapiens GN=OSBPL9 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.262e-18
Identity = 64/188 (34.04%), Postives = 98/188 (52.13%), Query Frame = 3
Query:  231 STEDAEDEARRGRWKQEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRR---AWKPFNPVLGETF--------------EMVNHG--------GVTFIAEQVSHHPPMSAGHAE--NEHFIYDVTSKLRTKFLGNSIDVYPVGR 713
            S +D +D+A  G  ++ +      + Q  +G D+  +V LP FI E  S+L+  A+   +  L     + +DP  R+V    W LS + A R+   A KP+NP+LGE F              E+V+ G         VTF+AEQVSHHPP+SA +AE  N+   ++     ++KFLG SI V+ +G+
Sbjct:  355 SHDDRDDDAEAGSVEEHKSVIMHLLSQVRLGMDLTKVV-LPTFILERRSLLEMYADFFAHPDLFVSISDQKDPKDRMVQVVKWYLSAFHAGRKGSVAKKPYNPILGEIFQCHWTLPNDTEENTELVSEGPVPWVSKNSVTFVAEQVSHHPPISAFYAECFNKKIQFNAHIWTKSKFLGMSIGVHNIGQ 541          
BLAST of FC918216 vs. ExPASy Swiss-Prot
Match: OSBL9_MOUSE (Oxysterol-binding protein-related protein 9 OS=Mus musculus GN=Osbpl9 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.260e-18
Identity = 64/188 (34.04%), Postives = 97/188 (51.60%), Query Frame = 3
Query:  231 STEDAEDEARRGRWKQEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRR---AWKPFNPVLGETF--------------EMVNHG--------GVTFIAEQVSHHPPMSAGHAE--NEHFIYDVTSKLRTKFLGNSIDVYPVGR 713
            S +D +D+   G  ++ +      + Q  +G D+  +V LP FI E  S+L+  A+   +  L     + +DP  R+V    W LS + A RR   A KP+NP+LGE F              E+V+ G         VTF+AEQVSHHPP+SA +AE  N+   ++     ++KFLG SI V+ +G+
Sbjct:  355 SHDDRDDDGEAGSVEEHKSVIMHLLSQVRLGMDLTKVV-LPTFILERRSLLEMYADFFAHPDLFVSISDQKDPRDRMVQVVKWYLSAFHAGRRGSVAKKPYNPILGEIFQCHWTLPNDTEENAELVSEGPVPWVSKNSVTFVAEQVSHHPPISAFYAECFNKKIQFNAHIWTKSKFLGMSIGVHNIGQ 541          
BLAST of FC918216 vs. ExPASy Swiss-Prot
Match: OSBL8_HUMAN (Oxysterol-binding protein-related protein 8 OS=Homo sapiens GN=OSBPL8 PE=1 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 1.240e-17
Identity = 57/189 (30.16%), Postives = 92/189 (48.68%), Query Frame = 3
Query:  276 QEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRRAW-KPFNPVLGETFEMV-----NHGGVTFIAEQVSHHPPMSAGHAEN--EHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPG 818
            +E +   W ++++       S V LP FI EP S L ++++   ++  L  A   E+PY RL     W LS ++   +   KP+NP+LGETF  +      +    +IAEQVSHHPP+SA +  N  + F    +   ++KF GNS+     G  R+T    G    +  P      +++G   ++  G
Sbjct:  401 EENKSLIWTLLKQVRPGMDLSKVVLPTFILEPRSFLDKLSDYYYHADFLSEAALEENPYFRLKKVVKWYLSGFYKKPKGLKKPYNPILGETFRCLWIHPRTNSKTFYIAEQVSHHPPISAFYVSNRKDGFCLSGSILAKSKFYGNSLSAILEGEARLTFLNRGEDYVMTMPYAHCKGILYGTMTLELGG 589          
BLAST of FC918216 vs. ExPASy Swiss-Prot
Match: OSBL9_XENTR (Oxysterol-binding protein-related protein 9 OS=Xenopus tropicalis GN=osbpl9 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.035e-17
Identity = 64/189 (33.86%), Postives = 94/189 (49.74%), Query Frame = 3
Query:  234 TEDAEDEARRGRWKQEERDNYWKMM-QKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRR---AWKPFNPVLGETF---------------EMVNHG--------GVTFIAEQVSHHPPMSAGHAE--NEHFIYDVTSKLRTKFLGNSIDVYPVGR 713
            T D  D+   G   +E +     ++ Q  +G D+  +V LP FI E  S+L+  A+   +  L     E +DP  R+     W LS + A R+   A KP+NP+LGE F               E V+ G         VTF+AEQVSHHPP+SA +AE  N+   ++     ++KFLG SI V+ +G+
Sbjct:  357 THDDRDDDGEGESVEEHKSVIMHLLSQVRLGMDLTKVV-LPTFILERRSLLEMYADFFAHPDLFVSIGEHKDPKDRMAQVVKWYLSAFHAGRKGSVAKKPYNPILGEVFQCHWALPGLENDENPEAVSEGPIPWASKNNVTFVAEQVSHHPPISAFYAECYNKRIQFNAHIWTKSKFLGMSIGVHNIGQ 544          
BLAST of FC918216 vs. ExPASy Swiss-Prot
Match: OSBL5_MOUSE (Oxysterol-binding protein-related protein 5 OS=Mus musculus GN=Osbpl5 PE=2 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 8.035e-17
Identity = 56/189 (29.63%), Postives = 90/189 (47.62%), Query Frame = 3
Query:  276 QEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALS-IYFAYRRAWKPFNPVLGETFEM-----VNHGGVTFIAEQVSHHPPMSAGHAEN--EHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPG 818
            +E +   W ++++       S V LP F+ EP S L ++++   +  LL  A   +DPY R+     W LS  Y   +   KP+NP+LGETF         +    +IAEQVSHHPP+SA +  N  + F    +   ++KF GNS+     G+ ++T         L  P      +++G   ++  G
Sbjct:  364 EENKSLMWVLLRQLRPGMDLSRVVLPTFVLEPRSFLGKLSDYYYHGDLLSRAAAEDDPYCRMKLVLRWYLSGFYKKPKGIKKPYNPILGETFRCRWLHPQTNSHTFYIAEQVSHHPPVSAFYVSNRKDGFCMSGSITAKSKFYGNSLSALLDGKAKLTFLNRKEEYTLTMPYAHCRGILYGTMTMELGG 552          
BLAST of FC918216 vs. ExPASy Swiss-Prot
Match: OSBL5_HUMAN (Oxysterol-binding protein-related protein 5 OS=Homo sapiens GN=OSBPL5 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.049e-16
Identity = 56/193 (29.02%), Postives = 90/193 (46.63%), Query Frame = 3
Query:  276 QEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALS-IYFAYRRAWKPFNPVLGETFEMV-----NHGGVTFIAEQVSHHPPMSAGHAEN--EHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVM 830
            +E +   W ++++       S V LP F+ EP S L ++++   ++ LL  A   ED Y R+     W LS  Y   +   KP+NP+LGETF              +IAEQVSHHPP+SA H  N  + F    +   +++F GNS+     G+  +T         L  P      +++G   ++  G + +
Sbjct:  365 EENKSLMWTLLKQLRPGMDLSRVVLPTFVLEPRSFLNKLSDYYYHADLLSRAAVEEDAYSRMKLVLRWYLSGFYKKPKGIKKPYNPILGETFRCCWFHPQTDSRTFYIAEQVSHHPPVSAFHVSNRKDGFCISGSITAKSRFYGNSLSALLDGKATLTFLNRAEDYTLTMPYAHCKGILYGTMTLELGGKVTI 557          
BLAST of FC918216 vs. ExPASy Swiss-Prot
Match: OSB4_DICDI (Oxysterol-binding protein 4 OS=Dictyostelium discoideum GN=osbD PE=3 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 5.208e-16
Identity = 59/168 (35.12%), Postives = 85/168 (50.60%), Query Frame = 3
Query:  318 IGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRR--AWKPFNPVLGETFE-----MVNHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKL--RTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFG 794
            IG D+ S V LP FI EP S+L++  + M +  +L    + E P  R+   + W LS  F YR+    KP+NP+LGE F         +     +AEQ+SHHPP+S  +  N    Y +T  +  R+KFLGNS+ V   G + +TL        +  P      +IFG
Sbjct:   87 IGVDL-SRVPLPTFILEPRSLLEKFTDNMIHGEILCNLSKLESPMDRMHLITKWYLSA-FHYRKKGLQKPYNPILGEIFRTRWEFKETNSNCIMVAEQISHHPPVSCIYLSNRKDGYTMTGTINPRSKFLGNSMAVIVDGSSTLTLLGLQEEYVITFPTAVARGIIFG 252          
The following BLAST results are available for this feature:
BLAST of FC918216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
YEH1_SCHPO1.730e-1933.91Oxysterol-binding protein homolog C23H4.01c OS=Sch... [more]
OSH3_YEAST5.033e-1935.26Oxysterol-binding protein homolog 3 OS=Saccharomyc... [more]
OSBL9_PONAB3.262e-1834.04Oxysterol-binding protein-related protein 9 OS=Pon... [more]
OSBL9_HUMAN3.262e-1834.04Oxysterol-binding protein-related protein 9 OS=Hom... [more]
OSBL9_MOUSE4.260e-1834.04Oxysterol-binding protein-related protein 9 OS=Mus... [more]
OSBL8_HUMAN1.240e-1730.16Oxysterol-binding protein-related protein 8 OS=Hom... [more]
OSBL9_XENTR8.035e-1733.86Oxysterol-binding protein-related protein 9 OS=Xen... [more]
OSBL5_MOUSE8.035e-1729.63Oxysterol-binding protein-related protein 5 OS=Mus... [more]
OSBL5_HUMAN1.049e-1629.02Oxysterol-binding protein-related protein 5 OS=Hom... [more]
OSB4_DICDI5.208e-1635.12Oxysterol-binding protein 4 OS=Dictyostelium disco... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA74DD05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA74DD05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918216 ID=FC918216; Name=FC918216; organism=Citrus clementina; type=EST; length=831bp
CGATTAAAACGTCTCTCTCTCTATTCTCTCTAAGCTACGTATTCATTCGA
TAGCTGCGAGTATTTTCTCCTGAGATTGTTAATTGAGACATGGCTTCCGA
TGGATCTAAGCAAGGCGGCGGTTTCTTCGCCTCCATCGCCGCCGGTTGGT
CGACTATCGGCTCCGCCATGAGTAAATCGGTCAACGGTTTATTGGGCTAT
GAAGGGCTGGAAGTTGTTAATCCTGAAGGGAGCACGGAAGATGCTGAAGA
TGAAGCAAGAAGAGGAAGATGGAAACAGGAGGAAAGGGACAATTACTGGA
AGATGATGCAAAAGTATATAGGTGCTGATGTTCAATCGTTGGTGACTCTT
CCTGTATTTATTTCAGAGCCAAATTCAGTGCTGCAGAGAATGGCAGAGTT
GATGGAGTACTCCCACCTTCTGGATCTGGCAGATGAATGCGAGGATCCAT
ACATGAGATTGGTATATGCTTCATCATGGGCTTTATCAATCTACTTTGCC
TATCGACGGGCCTGGAAGCCATTTAATCCAGTTCTTGGTGAAACTTTTGA
AATGGTTAATCATGGTGGTGTTACATTTATAGCTGAACAAGTTAGTCATC
ACCCCCCAATGAGTGCTGGTCATGCCGAAAATGAGCACTTCATTTATGAT
GTGACTTCAAAGTTGAGAACAAAATTTTTAGGAAACTCGATTGATGTTTA
TCCAGTTGGAAGGACACGTGTGACACTTAAAAGAGATGGGGTGGTTCTCG
ATTTGGTGCCCCCTCCCACAAAGGTTCACAATTTAATTTTTGGACGAACT
TGGATTGATTCACCGGGGGATATGGTCATGA
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